Miyakogusa Predicted Gene

Lj5g3v1301250.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1301250.1 tr|B9IQ06|B9IQ06_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_780402 PE=4
SV=1,43.14,2e-16,seg,NULL,CUFF.55120.1
         (105 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g36210.1                                                       125   1e-29

>Glyma20g36210.1 
          Length = 513

 Score =  125 bits (313), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 66/105 (62%), Positives = 72/105 (68%), Gaps = 4/105 (3%)

Query: 2   EVLVLXXXXXXXXXXXXXXXNIICPSQELV-FDEGNVWKQINAIRKIIGYEGTAQASCAD 60
           EVLV                NI+CPSQE+V  DE  +WK +N IRKI+GYEG  Q SC+D
Sbjct: 412 EVLVSSVEEESRPSECSSGENIVCPSQEVVVLDEEKIWKAMNIIRKIVGYEGRMQGSCSD 471

Query: 61  ELKALYIFTGVEPPTFLKQNLCDPAEINEKLHFLMSIVGIKSNMA 105
           ELKALYIFTGVEPPT     L DPAEI EKLHFLMSIVGIKSN A
Sbjct: 472 ELKALYIFTGVEPPTG---TLDDPAEIKEKLHFLMSIVGIKSNDA 513