Miyakogusa Predicted Gene

Lj5g3v1211580.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1211580.1 Non Chatacterized Hit- tr|K4C772|K4C772_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,73.01,0,ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX,Clp
protease, ATP-binding subunit ClpX; HSL AND ,CUFF.55059.1
         (278 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma09g28260.1                                                       278   5e-75
Glyma04g41400.1                                                       251   6e-67
Glyma20g35600.1                                                       251   7e-67
Glyma06g13450.1                                                       249   3e-66
Glyma16g33080.1                                                       232   3e-61
Glyma10g32040.1                                                       114   1e-25
Glyma04g39180.1                                                        50   2e-06

>Glyma09g28260.1 
          Length = 659

 Score =  278 bits (711), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 137/156 (87%), Positives = 145/156 (92%)

Query: 123 LGRDLPTPKEICKGLDKFVIGQNSAKKVLSVAVYNHYKRIYYASSQEGSGEDSKISEGKD 182
           LG+D P+PKEICKGLDKFVIGQ  AKKVLSVAVYNHYKRIY+A+ Q+GS  DS  SE  D
Sbjct: 237 LGKDFPSPKEICKGLDKFVIGQQRAKKVLSVAVYNHYKRIYHATLQKGSAADSGASEVLD 296

Query: 183 DDDHVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILY 242
           DDD+VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILY
Sbjct: 297 DDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILY 356

Query: 243 KLLVAAEFNVQAAQQGIVYIDEVDKITKKAESLNIS 278
           KLLVAA+FNV AAQQGI+YIDEVDKITKKAESLNIS
Sbjct: 357 KLLVAADFNVAAAQQGIIYIDEVDKITKKAESLNIS 392


>Glyma04g41400.1 
          Length = 524

 Score =  251 bits (641), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 125/160 (78%), Positives = 136/160 (85%), Gaps = 4/160 (2%)

Query: 123 LGRDLPTPKEICKGLDKFVIGQNSAKKVLSVAVYNHYKRIYYASSQE----GSGEDSKIS 178
           LG   PTPKEICKGLDKFVIGQ  AKKVLSVAVYNHYKRI+  +S      G  +++ + 
Sbjct: 100 LGNSFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRIFNETSSSKWPAGDSDNNNVK 159

Query: 179 EGKDDDDHVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVE 238
               DDD VELEKSN+LLMGPTGSGKTLLAKTLARFVNVPFVIADAT+LTQAGYVGEDVE
Sbjct: 160 TDAVDDDRVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATSLTQAGYVGEDVE 219

Query: 239 SILYKLLVAAEFNVQAAQQGIVYIDEVDKITKKAESLNIS 278
           SILYKLL+ A++NV AAQQGIVYIDEVDKITKKAESLNIS
Sbjct: 220 SILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNIS 259


>Glyma20g35600.1 
          Length = 506

 Score =  251 bits (641), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 135/183 (73%), Positives = 139/183 (75%), Gaps = 27/183 (14%)

Query: 123 LGRDLPTPKEICKGLDKFVIGQNSAKKVLSVAVYNHYKRIYYASSQ----------EGSG 172
           LGRD PTPKEICKGLDKFVIGQ+ AKKVLSVAVYNHY+RIY  S                
Sbjct: 57  LGRDFPTPKEICKGLDKFVIGQHRAKKVLSVAVYNHYQRIYQGSLSFFFRYHTFFIHFVI 116

Query: 173 EDSKISEGKDDDDHVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQ--- 229
            D  +S+G DD D VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQ   
Sbjct: 117 ADEGLSQGLDDGDDVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAIL 176

Query: 230 --------------AGYVGEDVESILYKLLVAAEFNVQAAQQGIVYIDEVDKITKKAESL 275
                         AGYVGEDVESILYKLL AAEFNVQAAQQGIVYIDEVDKITKKAESL
Sbjct: 177 AISDLVPWFTQGFIAGYVGEDVESILYKLLAAAEFNVQAAQQGIVYIDEVDKITKKAESL 236

Query: 276 NIS 278
           NIS
Sbjct: 237 NIS 239


>Glyma06g13450.1 
          Length = 524

 Score =  249 bits (635), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 125/159 (78%), Positives = 134/159 (84%), Gaps = 3/159 (1%)

Query: 123 LGRDLPTPKEICKGLDKFVIGQNSAKKVLSVAVYNHYKRIYYASS---QEGSGEDSKISE 179
           LG   PTPKEICKGLDKFVIGQ  AKKVLSVAVYNHYKRI+  +S         D+ +  
Sbjct: 101 LGNSFPTPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRIFNETSLPKWPAGDSDNSVKV 160

Query: 180 GKDDDDHVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVES 239
              DDD VELEKSN+LLMGPTGSGKTLLAKTLARFVNVPFVIADAT+LTQAGYVGEDVES
Sbjct: 161 DAADDDRVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATSLTQAGYVGEDVES 220

Query: 240 ILYKLLVAAEFNVQAAQQGIVYIDEVDKITKKAESLNIS 278
           ILYKLL+ A++NV AAQQGIVYIDEVDKITKKAESLNIS
Sbjct: 221 ILYKLLMVADYNVAAAQQGIVYIDEVDKITKKAESLNIS 259


>Glyma16g33080.1 
          Length = 689

 Score =  232 bits (592), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 121/169 (71%), Positives = 137/169 (81%), Gaps = 13/169 (7%)

Query: 123 LGRDLPTPKEICKGLDKFVIGQNSAKKVLSVAVYNHYKRIYYASSQEGSGEDSKISEGKD 182
           LG+D P+PKEICKGLDKFVIGQ  AKKVLSVAVYNHYKRIY+A+ Q+GS  DS +SE  D
Sbjct: 254 LGKDFPSPKEICKGLDKFVIGQQRAKKVLSVAVYNHYKRIYHATLQKGSAADSGVSEVLD 313

Query: 183 DDDHVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQA------GYVGED 236
           DDD+VELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFV+ DATTLTQA       + G  
Sbjct: 314 DDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVVTDATTLTQAIVVSNCFWFGFI 373

Query: 237 VESILYK-------LLVAAEFNVQAAQQGIVYIDEVDKITKKAESLNIS 278
           V S++ +       L  AA+FNV AAQQGI+YIDEVDKITKK++SLNIS
Sbjct: 374 VGSLVLRQSFVVIDLNKAADFNVAAAQQGIIYIDEVDKITKKSKSLNIS 422


>Glyma10g32040.1 
          Length = 413

 Score =  114 bits (285), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/156 (46%), Positives = 85/156 (54%), Gaps = 41/156 (26%)

Query: 123 LGRDLPTPKEICKGLDKFVIGQNSAKKVLSVAVYNHYKRIYYASSQEGSGEDSKISEGKD 182
           LGRD PTPKEI KGLDKFVIGQ+ AKKVLSVAVYNHY+RIY+                  
Sbjct: 21  LGRDFPTPKEIFKGLDKFVIGQHMAKKVLSVAVYNHYQRIYH------------------ 62

Query: 183 DDDHVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILY 242
                               G      +L   VN    +A     + +  V   ++  L 
Sbjct: 63  --------------------GFLSFFLSLFFSVNSSSTVAKDCPWSFSRRVA--IQMHLV 100

Query: 243 KLLVAAEFNVQAAQQGIVYIDEVDKITKKAESLNIS 278
           ++  A EFNVQAAQQGI+YIDEVDKITKKAESLNIS
Sbjct: 101 QIFFA-EFNVQAAQQGIIYIDEVDKITKKAESLNIS 135


>Glyma04g39180.1 
          Length = 755

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 6/78 (7%)

Query: 194 VLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLVAAEFNVQ 253
           VLL GP G+GKTLLAK +A    +PF  A+ T   +  +VG  V +   K L A   N +
Sbjct: 252 VLLHGPPGTGKTLLAKAIAGEAGLPFFAANGTDFVEM-FVG--VAASRVKDLFA---NAR 305

Query: 254 AAQQGIVYIDEVDKITKK 271
           A    I++IDE+D I  K
Sbjct: 306 AFSPSIIFIDEIDAIGSK 323