Miyakogusa Predicted Gene

Lj5g3v1208010.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1208010.2 tr|B6U329|B6U329_MAIZE AGG2 OS=Zea mays PE=4
SV=1,57.47,1e-18,coiled-coil,NULL; seg,NULL; G-gamma,G-protein
gamma-like domain,CUFF.55019.2
         (106 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g16190.1                                                        85   2e-17
Glyma10g03610.1                                                        84   3e-17
Glyma10g03610.2                                                        68   2e-12
Glyma14g17060.1                                                        61   2e-10
Glyma17g29590.1                                                        58   2e-09
Glyma11g18050.1                                                        55   1e-08

>Glyma02g16190.1 
          Length = 109

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 50/84 (59%), Gaps = 1/84 (1%)

Query: 23  DTRGKHRVHAELKRTXXXXXXXXXXXXXXXXXXXXSTSCKEMISNVEARPDPLLPLTAGP 82
           D RGKHR+ AELKR                     ST C E++ N+E+RPDPLLP   GP
Sbjct: 27  DKRGKHRILAELKRLDQDSMFLQEELEELEKTENVSTICTELLQNMESRPDPLLPEVHGP 86

Query: 83  VSPSWDKWFEGPQDSKSCCRCSIL 106
           V+  WD+WFEGPQD ++ CRC IL
Sbjct: 87  VNLLWDRWFEGPQDPQA-CRCWIL 109


>Glyma10g03610.1 
          Length = 109

 Score = 84.0 bits (206), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 40/84 (47%), Positives = 49/84 (58%), Gaps = 1/84 (1%)

Query: 23  DTRGKHRVHAELKRTXXXXXXXXXXXXXXXXXXXXSTSCKEMISNVEARPDPLLPLTAGP 82
           D RGKHR+ AELKR                     ST C E++ N++ RPDPLLP   GP
Sbjct: 27  DKRGKHRILAELKRLDQESKFLQEELEELEKTENVSTICTELLQNIDTRPDPLLPEVHGP 86

Query: 83  VSPSWDKWFEGPQDSKSCCRCSIL 106
           V+  WD+WFEGPQD ++ CRC IL
Sbjct: 87  VNLLWDRWFEGPQDPQA-CRCWIL 109


>Glyma10g03610.2 
          Length = 81

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 29/49 (59%), Positives = 37/49 (75%), Gaps = 1/49 (2%)

Query: 58  STSCKEMISNVEARPDPLLPLTAGPVSPSWDKWFEGPQDSKSCCRCSIL 106
           ST C E++ N++ RPDPLLP   GPV+  WD+WFEGPQD ++ CRC IL
Sbjct: 34  STICTELLQNIDTRPDPLLPEVHGPVNLLWDRWFEGPQDPQA-CRCWIL 81


>Glyma14g17060.1 
          Length = 126

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 38/77 (49%)

Query: 26  GKHRVHAELKRTXXXXXXXXXXXXXXXXXXXXSTSCKEMISNVEARPDPLLPLTAGPVSP 85
           GKHR+ A +                       ST CK++IS+VE+ PDPLLP T G V  
Sbjct: 48  GKHRLQAAITNLNNQISILQEELKKVETIGESSTVCKDLISSVESTPDPLLPFTKGSVDA 107

Query: 86  SWDKWFEGPQDSKSCCR 102
            WD+WF G   S++  R
Sbjct: 108 GWDRWFGGAHHSRNHKR 124


>Glyma17g29590.1 
          Length = 131

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 37/77 (48%)

Query: 26  GKHRVHAELKRTXXXXXXXXXXXXXXXXXXXXSTSCKEMISNVEARPDPLLPLTAGPVSP 85
           GKHR+ A +                       ST CK++IS+VE+ PDPLLP T   V  
Sbjct: 53  GKHRLQAAITNLNNQISILQEELEKVETIGESSTVCKDLISSVESIPDPLLPFTKSSVDA 112

Query: 86  SWDKWFEGPQDSKSCCR 102
            WD+WF G   S++  R
Sbjct: 113 GWDRWFGGAHHSRNHKR 129


>Glyma11g18050.1 
          Length = 65

 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/45 (53%), Positives = 31/45 (68%)

Query: 58  STSCKEMISNVEARPDPLLPLTAGPVSPSWDKWFEGPQDSKSCCR 102
           ST CK++IS+VE+ PDPLLP T G V   WD+WF G   S++  R
Sbjct: 19  STVCKDLISSVESIPDPLLPFTKGSVDAGWDRWFGGAHHSRNHKR 63