Miyakogusa Predicted Gene

Lj5g3v1206650.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1206650.2 tr|B9IQW0|B9IQW0_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_915042 PE=4
SV=1,29.67,0.000000000000009,FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.55004.2
         (248 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g35310.1                                                       422   e-118
Glyma10g32300.1                                                       413   e-116
Glyma19g45310.1                                                        65   8e-11
Glyma16g00500.1                                                        54   2e-07
Glyma12g28860.1                                                        52   8e-07

>Glyma20g35310.1 
          Length = 876

 Score =  422 bits (1085), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 210/248 (84%), Positives = 225/248 (90%)

Query: 1   MIQEYDNYLGPGSVLEILSDTPINDRIIRESKISGPNKLKNVRVSHRIGNPMDYDILKET 60
           MIQEYDNYLGP SVLE+LSDTP++DRI + S I+G NKLKNVRVSHRIGNPMDYD LKET
Sbjct: 629 MIQEYDNYLGPESVLEVLSDTPLDDRINKASNINGHNKLKNVRVSHRIGNPMDYDTLKET 688

Query: 61  ILNIQSSLKKEDIPLSIAVIPDRDWLLGDPSKADKLSAFSLLLAENICNQVGVKVHNLVA 120
           ILNIQ+SLK ED+P+SIAVI DRDWLLGDP+KADKLSA+SLLLAENICN++GVKV NLVA
Sbjct: 689 ILNIQNSLKNEDVPMSIAVISDRDWLLGDPAKADKLSAYSLLLAENICNKLGVKVQNLVA 748

Query: 121 EIVDSKLGKQITRIKPSVTYIAAEEIMSLVTAQVTENSELNEVWKDVLNADGDEIYVKDI 180
           EIVDSKLGKQI+RIKPSVTYIAAEEIMSLVTAQV ENSELNEVWKDVLNA+GDEIYVKDI
Sbjct: 749 EIVDSKLGKQISRIKPSVTYIAAEEIMSLVTAQVAENSELNEVWKDVLNAEGDEIYVKDI 808

Query: 181 GLYMKEGENPSFTELSERAYLRREVAIGYXXXXXXXXXXXXXSEPLSLEMTDSLIVISEL 240
           GLYMKEGENPSF+ELSERAYLRREVAIGY             SEPLSLEMTDSLIVISEL
Sbjct: 809 GLYMKEGENPSFSELSERAYLRREVAIGYVKNKKNVINPVPKSEPLSLEMTDSLIVISEL 868

Query: 241 EGEQPVVL 248
           EGEQPVVL
Sbjct: 869 EGEQPVVL 876


>Glyma10g32300.1 
          Length = 852

 Score =  413 bits (1062), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 203/248 (81%), Positives = 224/248 (90%)

Query: 1   MIQEYDNYLGPGSVLEILSDTPINDRIIRESKISGPNKLKNVRVSHRIGNPMDYDILKET 60
           MIQEYDNYLGPGSVLE+LSDTP++DRI + S I G NKL+NVRVSHRIGNPMDYD LKET
Sbjct: 605 MIQEYDNYLGPGSVLEVLSDTPLDDRINKASNIHGHNKLRNVRVSHRIGNPMDYDTLKET 664

Query: 61  ILNIQSSLKKEDIPLSIAVIPDRDWLLGDPSKADKLSAFSLLLAENICNQVGVKVHNLVA 120
           IL+IQ+SLK ED+P+SIAVI DRDWLLGDPSKAD+LSA++LLLAENICN++GVKV NLVA
Sbjct: 665 ILHIQNSLKNEDVPMSIAVISDRDWLLGDPSKADRLSAYALLLAENICNKLGVKVQNLVA 724

Query: 121 EIVDSKLGKQITRIKPSVTYIAAEEIMSLVTAQVTENSELNEVWKDVLNADGDEIYVKDI 180
           EIVDSKLGKQI+RI+PSVT IAAEEIMSLVTAQV ENSELNEVWKD+L+A+GDEIY+KDI
Sbjct: 725 EIVDSKLGKQISRIRPSVTSIAAEEIMSLVTAQVAENSELNEVWKDLLDAEGDEIYIKDI 784

Query: 181 GLYMKEGENPSFTELSERAYLRREVAIGYXXXXXXXXXXXXXSEPLSLEMTDSLIVISEL 240
           GLYMKEGENPSF+ELSERAYLRREVAIGY             SEPLSLEMTDSLIVISEL
Sbjct: 785 GLYMKEGENPSFSELSERAYLRREVAIGYVKNKKNVINPVAKSEPLSLEMTDSLIVISEL 844

Query: 241 EGEQPVVL 248
           EGEQPVVL
Sbjct: 845 EGEQPVVL 852


>Glyma19g45310.1 
          Length = 846

 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 54/244 (22%)

Query: 1   MIQEYDNYLGPGSVLEILSDTPINDRIIRESKISGP----NKLKNVRVSHRIGNPMDYDI 56
           MI   D  L  GS L + +D P  +R   E K++      N+L+N+ + +R GN +    
Sbjct: 588 MIMVLDASLAHGSELWMFNDVPEKER---EKKLTDGGLDINRLENISLVNREGNAV---- 640

Query: 57  LKETILNIQSSLKKEDIPL----SIAVIPDRDWLLGDPS-KADKLSAFSLLLAENICNQ- 110
                  I+  L  E +PL    SI ++ D    + D + +AD  S  +LLL  +I  + 
Sbjct: 641 -------IRRHL--ESLPLESFDSILILADES--VEDSAIQADSRSLATLLLIRDIQARR 689

Query: 111 -----VGVKVHN--------------------LVAEIVDSKLGKQITRIKPSVTYIAAEE 145
                +  + H                     +++EI+D +    I+  K S  Y+ + E
Sbjct: 690 LPYVSMASQAHGGSFSKGSWIGEMKQASDKTVIISEILDPRTKNLISMSKIS-DYVLSNE 748

Query: 146 IMSLVTAQVTENSELNEVWKDVLNADGDEIYVKDIGLYMKEGENPSFTELSERAYLRREV 205
           ++S+  A V E+ ++N+V +++   +G+E++++   LY+ EGE  +F E+  RA  RRE+
Sbjct: 749 LVSMALAMVAEDRQINDVLEELFAEEGNEMHIRKADLYLCEGEELNFYEIMLRARQRREI 808

Query: 206 AIGY 209
            IGY
Sbjct: 809 VIGY 812


>Glyma16g00500.1 
          Length = 852

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 110/236 (46%), Gaps = 45/236 (19%)

Query: 1   MIQEYDNYLGPGSVLEILSDTPINDRIIRESKISGP---NKLKNVRVSHRIGNPMDYDIL 57
           MI   +  L PGS L + ++ P  +R   +  + G    ++L+N+++ HR GN +     
Sbjct: 601 MIMVLEALLAPGSELWMFNEVPEKER--EKKLVDGGLDVSELENIKLVHREGNAV----- 653

Query: 58  KETILNIQSSLKKEDIPL----SIAVIPDRDWLLGDPSKADKLSAFSLLLAENICNQ--- 110
                 I+  L  E +PL    SI ++ D   +    + +D  S  +LLL  +I ++   
Sbjct: 654 ------IRRHL--EGLPLETFDSILILADES-VEDSVAHSDSRSLATLLLIRDIQSKRLP 704

Query: 111 ---VGVKVHN--------------LVAEIVDSKLGKQITRIKPSVTYIAAEEIMSLVTAQ 153
               G   HN              +++EI+DS+  + +  +     Y+ + E++S+  A 
Sbjct: 705 YKDTGFS-HNSWIRDMQQASVKSIIISEILDSRT-RNLVSVSRISDYVLSNELVSMALAM 762

Query: 154 VTENSELNEVWKDVLNADGDEIYVKDIGLYMKEGENPSFTELSERAYLRREVAIGY 209
           V E+ ++N V +++   +G+E+  K   LY+ + E   F ++  R   R E+ IGY
Sbjct: 763 VAEDKQINRVLEELFAEEGNEMCTKAAELYLFDKEEVCFYDIMIRGRTRNEIVIGY 818


>Glyma12g28860.1 
          Length = 864

 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 105/234 (44%), Gaps = 33/234 (14%)

Query: 1   MIQEYDNYLGPGSVLEILSDTPINDRIIRESKISGP---NKLKNVRVSHRIGNPMDYDIL 57
           MI   +  L PGS L + ++ P  +R   +  + G    ++L+N+++ HR GN +    L
Sbjct: 605 MIMVLEALLAPGSELWMFNEVPEKER--EKKLVDGGLDVSELENIKLVHREGNAVIRRHL 662

Query: 58  KETILNIQSS---LKKEDIPLSIA-------------------VIPDRDWLLGDPSKADK 95
           +   L    S   L  E +  S+A                    +P RD      S + +
Sbjct: 663 EGLPLETFDSILILADESVEDSVAHSDSRSLATLLLIRDIQSRRLPYRD----TKSTSLR 718

Query: 96  LSAFSLLLAENICNQVGVKVHNLVAEIVDSKLGKQITRIKPSVTYIAAEEIMSLVTAQVT 155
           LS FS         Q   K   +++EI+DS+  + +  +     Y+ + E++S+  A V 
Sbjct: 719 LSGFSHNSWIREMQQASDK-SIIISEILDSRT-RNLVSVSRISDYVLSNELVSMALAMVA 776

Query: 156 ENSELNEVWKDVLNADGDEIYVKDIGLYMKEGENPSFTELSERAYLRREVAIGY 209
           E+ ++N V +++   +G+E+ +K    Y+ + E   F  +  R   R+E+ IGY
Sbjct: 777 EDKQINRVLEELFAEEGNEMCIKPAEFYLFDQEELCFYNIMIRGRTRKEIVIGY 830