Miyakogusa Predicted Gene
- Lj5g3v1201280.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1201280.1 tr|F5B9G0|F5B9G0_LUPAN Malate dehydrogenase
OS=Lupinus angustifolius GN=MDH1 PE=2 SV=1,94.88,0,seg,NULL;
Ldh_1_C,Lactate/malate dehydrogenase, C-terminal;
Ldh_1_N,Lactate/malate dehydrogenase, N-,CUFF.54965.1
(332 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g00810.1 595 e-170
Glyma10g00920.1 585 e-167
Glyma02g00810.2 536 e-152
Glyma13g16440.1 534 e-152
Glyma10g00920.2 448 e-126
Glyma10g34150.1 233 2e-61
Glyma10g34150.3 227 1e-59
Glyma10g34150.2 207 1e-53
Glyma20g33380.1 192 5e-49
Glyma03g27160.1 65 9e-11
>Glyma02g00810.1
Length = 332
Score = 595 bits (1533), Expect = e-170, Method: Compositional matrix adjust.
Identities = 287/332 (86%), Positives = 297/332 (89%)
Query: 1 MAKDPVRVLVTGAAGQIGYALVPMVARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD 60
MAKDPVRVLVTGAAGQIGYALVPM+ARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD
Sbjct: 1 MAKDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD 60
Query: 61 AAFPLLKXXXXXXXXXXXXXXXNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKH 120
AAFPLLK NIAVMVGGFPRKEGMERKDVM+KNVSIYKSQASALEKH
Sbjct: 61 AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 120
Query: 121 AAANCKVLVVANPANTNALILKEYAPSIPEKNITCLTRLDHNRALGQISERLNIQVSDVK 180
AAANCKVLVVANPANTNALILKE+APSIPEKNI+CLTRLDHNRALGQISERL +QVSDVK
Sbjct: 121 AAANCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLTVQVSDVK 180
Query: 181 NVIIWGNHSSTQYPDVNHATIKTPAGEKSVRELVADDTWLNSEFITTVQQRGAAIIKARK 240
NVIIWGNHSSTQYPDVNHAT+ T AGEK VREL+ADD WLN EFITTVQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSTQYPDVNHATVATSAGEKPVRELIADDAWLNGEFITTVQQRGAAIIKARK 240
Query: 241 XXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPITSQNGEWKIV 300
CDHIRDWVLGTP+GTWVSMGVYSDGSYNVPAGLIYSFP+T NGEW IV
Sbjct: 241 LSSALSAASAACDHIRDWVLGTPQGTWVSMGVYSDGSYNVPAGLIYSFPVTCANGEWAIV 300
Query: 301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
QGLSIDEFSRKKLDLTAEELSEEKALAYSCL+
Sbjct: 301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLN 332
>Glyma10g00920.1
Length = 328
Score = 585 bits (1509), Expect = e-167, Method: Compositional matrix adjust.
Identities = 286/332 (86%), Positives = 295/332 (88%), Gaps = 4/332 (1%)
Query: 1 MAKDPVRVLVTGAAGQIGYALVPMVARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD 60
MAKDPVRVLVTGAAGQIGYALVPM+ARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD
Sbjct: 1 MAKDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD 60
Query: 61 AAFPLLKXXXXXXXXXXXXXXXNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKH 120
AAFPLLK NIAVMVGGFPRKEGMERKDVM+KNVSIYKSQASALEKH
Sbjct: 61 AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 120
Query: 121 AAANCKVLVVANPANTNALILKEYAPSIPEKNITCLTRLDHNRALGQISERLNIQVSDVK 180
AAANCKVLVVANPANTNALILKE+APSIPEKNI+CLTRLDHNRALGQISERLNIQVSDVK
Sbjct: 121 AAANCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLNIQVSDVK 180
Query: 181 NVIIWGNHSSTQYPDVNHATIKTPAGEKSVRELVADDTWLNSEFITTVQQRGAAIIKARK 240
NVIIWGNHSSTQYPDVNHAT+ GEK VREL+ADD WLN EFITTVQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSTQYPDVNHATV----GEKPVRELIADDAWLNGEFITTVQQRGAAIIKARK 236
Query: 241 XXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPITSQNGEWKIV 300
CDHIRDWVLGTP+GTWVSMGVYSDGSYNVPAGLIYSFP+T NGEW IV
Sbjct: 237 LSSALSAASAACDHIRDWVLGTPQGTWVSMGVYSDGSYNVPAGLIYSFPVTCANGEWTIV 296
Query: 301 QGLSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
QGL IDEFSRKKLDLTAEELSEEKALAYSCL+
Sbjct: 297 QGLPIDEFSRKKLDLTAEELSEEKALAYSCLN 328
>Glyma02g00810.2
Length = 307
Score = 536 bits (1382), Expect = e-152, Method: Compositional matrix adjust.
Identities = 258/302 (85%), Positives = 267/302 (88%)
Query: 1 MAKDPVRVLVTGAAGQIGYALVPMVARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD 60
MAKDPVRVLVTGAAGQIGYALVPM+ARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD
Sbjct: 1 MAKDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD 60
Query: 61 AAFPLLKXXXXXXXXXXXXXXXNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKH 120
AAFPLLK NIAVMVGGFPRKEGMERKDVM+KNVSIYKSQASALEKH
Sbjct: 61 AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 120
Query: 121 AAANCKVLVVANPANTNALILKEYAPSIPEKNITCLTRLDHNRALGQISERLNIQVSDVK 180
AAANCKVLVVANPANTNALILKE+APSIPEKNI+CLTRLDHNRALGQISERL +QVSDVK
Sbjct: 121 AAANCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLTVQVSDVK 180
Query: 181 NVIIWGNHSSTQYPDVNHATIKTPAGEKSVRELVADDTWLNSEFITTVQQRGAAIIKARK 240
NVIIWGNHSSTQYPDVNHAT+ T AGEK VREL+ADD WLN EFITTVQQRGAAIIKARK
Sbjct: 181 NVIIWGNHSSTQYPDVNHATVATSAGEKPVRELIADDAWLNGEFITTVQQRGAAIIKARK 240
Query: 241 XXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPITSQNGEWKIV 300
CDHIRDWVLGTP+GTWVSMGVYSDGSYNVPAGLIYSFP+T NGEW IV
Sbjct: 241 LSSALSAASAACDHIRDWVLGTPQGTWVSMGVYSDGSYNVPAGLIYSFPVTCANGEWAIV 300
Query: 301 QG 302
QG
Sbjct: 301 QG 302
>Glyma13g16440.1
Length = 373
Score = 534 bits (1376), Expect = e-152, Method: Compositional matrix adjust.
Identities = 251/330 (76%), Positives = 280/330 (84%)
Query: 3 KDPVRVLVTGAAGQIGYALVPMVARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVDAA 62
K+P+ +LVTGAAGQIGYALVPM+ARG MLGP+QP+ILHMLDI PA ESL G+KMEL+DAA
Sbjct: 44 KEPITILVTGAAGQIGYALVPMIARGAMLGPNQPMILHMLDIEPATESLKGLKMELIDAA 103
Query: 63 FPLLKXXXXXXXXXXXXXXXNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAA 122
+PLL+ NI VMVGGFPRKEGMERKDVMSKNVSIYK+QASALE+HAA
Sbjct: 104 YPLLRGVVATTDVVEACKDVNIVVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEQHAA 163
Query: 123 ANCKVLVVANPANTNALILKEYAPSIPEKNITCLTRLDHNRALGQISERLNIQVSDVKNV 182
+CKVLVVANPANTNALILKE+APSIPEKNITCLTRLDHNRALGQISERLN+ VSDVKNV
Sbjct: 164 TDCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISERLNVLVSDVKNV 223
Query: 183 IIWGNHSSTQYPDVNHATIKTPAGEKSVRELVADDTWLNSEFITTVQQRGAAIIKARKXX 242
I+WGNHSSTQYPDVNHAT+ T +GEK VRELV DD WLN+EFITTVQQRGAAIIKARK
Sbjct: 224 IVWGNHSSTQYPDVNHATVTTNSGEKPVRELVVDDNWLNNEFITTVQQRGAAIIKARKQS 283
Query: 243 XXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPITSQNGEWKIVQG 302
CDHIRDWVLGTP+G WVSMGVYSDGSY +P GLIYSFP+T + G+W IVQG
Sbjct: 284 SALSAASAACDHIRDWVLGTPKGEWVSMGVYSDGSYGIPTGLIYSFPVTCERGDWNIVQG 343
Query: 303 LSIDEFSRKKLDLTAEELSEEKALAYSCLS 332
L ID+FSR+K+D TA+EL EEK LA SCL+
Sbjct: 344 LKIDQFSREKMDKTAQELIEEKTLAKSCLN 373
>Glyma10g00920.2
Length = 242
Score = 448 bits (1152), Expect = e-126, Method: Compositional matrix adjust.
Identities = 216/246 (87%), Positives = 224/246 (91%), Gaps = 4/246 (1%)
Query: 87 MVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAANCKVLVVANPANTNALILKEYAP 146
MVGGFPRKEGMERKDVM+KNVSIYKSQASALEKHAAANCKVLVVANPANTNALILKE+AP
Sbjct: 1 MVGGFPRKEGMERKDVMTKNVSIYKSQASALEKHAAANCKVLVVANPANTNALILKEFAP 60
Query: 147 SIPEKNITCLTRLDHNRALGQISERLNIQVSDVKNVIIWGNHSSTQYPDVNHATIKTPAG 206
SIPEKNI+CLTRLDHNRALGQISERLNIQVSDVKNVIIWGNHSSTQYPDVNHAT+ G
Sbjct: 61 SIPEKNISCLTRLDHNRALGQISERLNIQVSDVKNVIIWGNHSSTQYPDVNHATV----G 116
Query: 207 EKSVRELVADDTWLNSEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGT 266
EK VREL+ADD WLN EFITTVQQRGAAIIKARK CDHIRDWVLGTP+GT
Sbjct: 117 EKPVRELIADDAWLNGEFITTVQQRGAAIIKARKLSSALSAASAACDHIRDWVLGTPQGT 176
Query: 267 WVSMGVYSDGSYNVPAGLIYSFPITSQNGEWKIVQGLSIDEFSRKKLDLTAEELSEEKAL 326
WVSMGVYSDGSYNVPAGLIYSFP+T NGEW IVQGL IDEFSRKKLDLTAEELSEEKAL
Sbjct: 177 WVSMGVYSDGSYNVPAGLIYSFPVTCANGEWTIVQGLPIDEFSRKKLDLTAEELSEEKAL 236
Query: 327 AYSCLS 332
AYSCL+
Sbjct: 237 AYSCLN 242
>Glyma10g34150.1
Length = 436
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 131/329 (39%), Positives = 189/329 (57%), Gaps = 7/329 (2%)
Query: 3 KDPVRVLVTGAAGQIGYALVPMVARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVDAA 62
K + + V+GAAG I L+ +A G + GPDQP+ L +L + ++L GV MEL D+
Sbjct: 91 KKLINIAVSGAAGMIANHLLFKLASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSL 150
Query: 63 FPLLKXXXXXXXXXXXXXXXNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAA 122
FPLL+ A+++G PR GMER D++ N IY +Q AL A+
Sbjct: 151 FPLLREVSIGIDPYEVFQDAEWALLIGAKPRGPGMERADLLDINGQIYAAQGRALNAVAS 210
Query: 123 ANCKVLVVANPANTNALILKEYAPSIPEKNITCLTRLDHNRALGQISERLNIQVSDVKNV 182
N KV+VV NP NTNALI + AP+IP KN LTRLD NRA Q++ + + V NV
Sbjct: 211 RNVKVIVVGNPCNTNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNV 270
Query: 183 IIWGNHSSTQYPDVNHATIKTPAGEKSVRELVADDTWLNSEFITTVQQRGAAIIKARKXX 242
IWGNHS+TQ PD +A I V+E+V D WL EF VQ+RG A+I+
Sbjct: 271 TIWGNHSTTQVPDFLNARIDG----LPVKEVVKDQKWLEEEFTEKVQKRGGALIQKWGRS 326
Query: 243 XXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPITSQ-NGEWKIV 300
D IR V TPEG W S GVYSDG+ Y + G+++S P S+ +G++++V
Sbjct: 327 SAASTSVSIVDAIRSLVTPTPEGDWFSSGVYSDGNPYGIAEGIVFSMPCRSKGDGDYELV 386
Query: 301 QGLSIDEFSRKKLDLT-AEELSEEKALAY 328
+ + D++ ++++ T AE L+E++ +A+
Sbjct: 387 KDVIFDDYLQQRIAKTEAELLAEKRCVAH 415
>Glyma10g34150.3
Length = 402
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 125/313 (39%), Positives = 178/313 (56%), Gaps = 6/313 (1%)
Query: 3 KDPVRVLVTGAAGQIGYALVPMVARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVDAA 62
K + + V+GAAG I L+ +A G + GPDQP+ L +L + ++L GV MEL D+
Sbjct: 91 KKLINIAVSGAAGMIANHLLFKLASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSL 150
Query: 63 FPLLKXXXXXXXXXXXXXXXNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAA 122
FPLL+ A+++G PR GMER D++ N IY +Q AL A+
Sbjct: 151 FPLLREVSIGIDPYEVFQDAEWALLIGAKPRGPGMERADLLDINGQIYAAQGRALNAVAS 210
Query: 123 ANCKVLVVANPANTNALILKEYAPSIPEKNITCLTRLDHNRALGQISERLNIQVSDVKNV 182
N KV+VV NP NTNALI + AP+IP KN LTRLD NRA Q++ + + V NV
Sbjct: 211 RNVKVIVVGNPCNTNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNV 270
Query: 183 IIWGNHSSTQYPDVNHATIKTPAGEKSVRELVADDTWLNSEFITTVQQRGAAIIKARKXX 242
IWGNHS+TQ PD +A I V+E+V D WL EF VQ+RG A+I+
Sbjct: 271 TIWGNHSTTQVPDFLNARIDG----LPVKEVVKDQKWLEEEFTEKVQKRGGALIQKWGRS 326
Query: 243 XXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPITSQ-NGEWKIV 300
D IR V TPEG W S GVYSDG+ Y + G+++S P S+ +G++++V
Sbjct: 327 SAASTSVSIVDAIRSLVTPTPEGDWFSSGVYSDGNPYGIAEGIVFSMPCRSKGDGDYELV 386
Query: 301 QGLSIDEFSRKKL 313
+ + D++ ++++
Sbjct: 387 KDVIFDDYLQQRI 399
>Glyma10g34150.2
Length = 423
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 123/329 (37%), Positives = 181/329 (55%), Gaps = 20/329 (6%)
Query: 3 KDPVRVLVTGAAGQIGYALVPMVARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVDAA 62
K + + V+GAAG I L+ +A G + GPDQP+ L +L + ++L GV MEL D+
Sbjct: 91 KKLINIAVSGAAGMIANHLLFKLASGEVFGPDQPIALKLLGSERSIQALEGVAMELEDSL 150
Query: 63 FPLLKXXXXXXXXXXXXXXXNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAA 122
FPLL+ A+++G PR GMER D++ N IY +Q AL A+
Sbjct: 151 FPLLREVSIGIDPYEVFQDAEWALLIGAKPRGPGMERADLLDINGQIYAAQGRALNAVAS 210
Query: 123 ANCKVLVVANPANTNALILKEYAPSIPEKNITCLTRLDHNRALGQISERLNIQVSDVKNV 182
N KV+VV NP NTNALI + AP+IP KN LTRLD NRA Q++ + + V NV
Sbjct: 211 RNVKVIVVGNPCNTNALICLKNAPNIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNV 270
Query: 183 IIWGNHSSTQYPDVNHATIKTPAGEKSVRELVADDTWLNSEFITTVQQRGAAIIKARKXX 242
IWGNHS+TQ PD +A I V+E+V D WL EF VQ+RG A+I+
Sbjct: 271 TIWGNHSTTQVPDFLNARIDG----LPVKEVVKDQKWLEEEFTEKVQKRGGALIQKWGRS 326
Query: 243 XXXXXXXXXCDHIRDWVLGTPEGTWVSMGVYSDGS-YNVPAGLIYSFPITSQ-NGEWKIV 300
D IR VYSDG+ Y + G+++S P S+ +G++++V
Sbjct: 327 SAASTSVSIVDAIRSL-------------VYSDGNPYGIAEGIVFSMPCRSKGDGDYELV 373
Query: 301 QGLSIDEFSRKKLDLT-AEELSEEKALAY 328
+ + D++ ++++ T AE L+E++ +A+
Sbjct: 374 KDVIFDDYLQQRIAKTEAELLAEKRCVAH 402
>Glyma20g33380.1
Length = 465
Score = 192 bits (488), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 121/358 (33%), Positives = 178/358 (49%), Gaps = 36/358 (10%)
Query: 3 KDPVRVLVTGAAGQIGYALVPMVARGVMLGPDQPVILHMLDIPPAAESLNGVKME----- 57
K + + V+GAAG I L+ +A G + GPDQP+ L +L + ++L + +
Sbjct: 91 KKLINIAVSGAAGMIANHLLFKLASGEVFGPDQPIALKLLGSERSIQALEALVIRHSATM 150
Query: 58 -----LVDAAFPLLKXXXXXXXXXXXXXXXNIAVMVGGF-------------------PR 93
+ + GG PR
Sbjct: 151 ICHFFFFCLNYTFNRNLSITLHEYDLSGQSRCCNGTGGLFVSFVEGGQCRMGFANRCKPR 210
Query: 94 KEGMERKDVMSKNVSIYKSQASALEKHAAANCKVLVVANPANTNALILKEYAPSIPEKNI 153
GMER D++ N IY +Q AL A+ N KV+VV NP NTNALI + AP+IP KN
Sbjct: 211 GPGMERADLLDINGQIYAAQGRALNAVASRNVKVIVVGNPCNTNALICLKNAPNIPAKNF 270
Query: 154 TCLTRLDHNRALGQISERLNIQVSDVKNVIIWGNHSSTQYPDVNHATIKTPAGEKSVREL 213
LTRLD NRA Q++ + + V NV IWGNHS+TQ PD +A I V+E+
Sbjct: 271 HALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHSTTQVPDFLNARIDG----LPVKEV 326
Query: 214 VADDTWLNSEFITTVQQRGAAIIKARKXXXXXXXXXXXCDHIRDWVLGTPEGTWVSMGVY 273
V D WL EF VQ+RG A+I+ D IR V TPEG W S GVY
Sbjct: 327 VKDHKWLEEEFTEKVQKRGGALIQKWGRSSAASTSVSIVDAIRSLVTPTPEGDWFSSGVY 386
Query: 274 SDGS-YNVPAGLIYSFPITSQ-NGEWKIVQGLSIDEFSRKKLDLT-AEELSEEKALAY 328
S+G+ Y + G+++S P S+ +G++++V+ + D++ R+++ T AE L+E++ +A+
Sbjct: 387 SNGNPYGIAEGIVFSMPCRSKGDGDYELVKDVIFDDYLRQRIAKTEAELLAEKRCVAH 444
>Glyma03g27160.1
Length = 39
Score = 65.1 bits (157), Expect = 9e-11, Method: Composition-based stats.
Identities = 29/38 (76%), Positives = 34/38 (89%)
Query: 30 MLGPDQPVILHMLDIPPAAESLNGVKMELVDAAFPLLK 67
MLG +QPV+LHMLDI P E+LNGVKMEL+DA+FPLLK
Sbjct: 1 MLGLNQPVMLHMLDIEPTTEALNGVKMELIDASFPLLK 38