Miyakogusa Predicted Gene

Lj5g3v1201250.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1201250.1 Non Chatacterized Hit- tr|I1KK11|I1KK11_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,85.24,0,coiled-coil,NULL; seg,NULL; Slu7,Pre-mRNA splicing
Prp18-interacting factor; STEP II SPLICING FACTOR,CUFF.54963.1
         (540 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g16120.1                                                       812   0.0  
Glyma18g40090.1                                                       808   0.0  
Glyma19g34750.1                                                       266   4e-71
Glyma10g10070.1                                                       209   8e-54
Glyma17g24690.1                                                       131   2e-30

>Glyma07g16120.1 
          Length = 540

 Score =  812 bits (2097), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/540 (72%), Positives = 425/540 (78%)

Query: 1   MATASATFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAEKP 60
           MATAS  FKSREDHRKQIELEEARKAGLAPAE+DEDGKEINPHIPQYMSSAPWYLNAE+P
Sbjct: 1   MATASVAFKSREDHRKQIELEEARKAGLAPAELDEDGKEINPHIPQYMSSAPWYLNAERP 60

Query: 61  SLKHQRKWKSDPNYTKSWYDRGAKTFQADNYRKGACENCGAMTHNTKSCVERPRKLGAKW 120
           SLKHQRKWKSDPNYTKSWYDRGAK FQAD YRKGACENCGAMTH++KSC+ERPR++GAKW
Sbjct: 61  SLKHQRKWKSDPNYTKSWYDRGAKIFQADKYRKGACENCGAMTHDSKSCMERPRRVGAKW 120

Query: 121 TNMHIAPDEKIETFELDYDGKRDRWNGYDPATXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           TN HIAPDEKIETFELDYDGKRDRWNGYD +T                            
Sbjct: 121 TNKHIAPDEKIETFELDYDGKRDRWNGYDASTYARVIERYEARDEARKKYLKEQQLKKLE 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXAHALKVDEAKVDESKQADFAKVEKRVRXXXXXXXXXVR 240
                                    L+VDEAKVDESKQ DFAKVEKRVR         VR
Sbjct: 181 KSNQNGEDAASDGDEEEEEDEDEDDLRVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVR 240

Query: 241 NLRIREDTAKYLLNLDVNSPYYDPKTHSMREDPLPDADPNEKFYGGDNQYRMSGQALEFK 300
           NLRIREDTAKYLLNLDVNS +YDPKT SMREDPLPDADPNEKFY GDNQYR SGQALEFK
Sbjct: 241 NLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEKFYLGDNQYRNSGQALEFK 300

Query: 301 QLNIHAWEAFEKGQDVHIQAAPSQAELLYKNFKIMKEKLKSQTKDAIIQKYGNAAAQEEL 360
           +LNIHAWEAF+KGQDVH+QAAPSQAELLYKNFK+MKEKLK QTK+ II+KYGNAA +++L
Sbjct: 301 ELNIHAWEAFDKGQDVHMQAAPSQAELLYKNFKVMKEKLKYQTKETIIEKYGNAADEDKL 360

Query: 361 PKELLLGQTERQVEYDRAGRIIKGLEASLPKSKYEEDVYINNHTSIWGSWWNDHQWGYKC 420
           P+ELLLGQ+ERQVEYDRAGRIIKG EA+LP+SKYEEDVYINNHT++WGSWW DHQWGYKC
Sbjct: 361 PRELLLGQSERQVEYDRAGRIIKGQEAALPRSKYEEDVYINNHTTVWGSWWKDHQWGYKC 420

Query: 421 CKQTIRNSYCTXXXXXXXXXXXXDLMKANIDRKVASEDTPAPAEEKRLATWGTDVPDDLV 480
           CKQTIRNSYCT            DLMKANI RK A+ D PAP EEK+LATWGTDVPDDLV
Sbjct: 421 CKQTIRNSYCTGAAGIEAAEAASDLMKANIARKEAATDDPAPVEEKKLATWGTDVPDDLV 480

Query: 481 LDQKKLDEALXXXXXXXXXXXXXXXXXYNVRWNDEVTPEEMEAYRVKKIHHDDPMKDFLH 540
           LD+K L E+L                 YNVRWNDEVT E+MEAYR+KK+HHDDPMKDFLH
Sbjct: 481 LDEKLLAESLKKEEQRKREEKDERKRKYNVRWNDEVTAEDMEAYRMKKVHHDDPMKDFLH 540


>Glyma18g40090.1 
          Length = 540

 Score =  808 bits (2088), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/540 (72%), Positives = 423/540 (78%)

Query: 1   MATASATFKSREDHRKQIELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAEKP 60
           MATAS  FKSREDHRKQIELEEARKAGLAPAE+DEDGKEINPHIPQYMSSAPWYLNAE+P
Sbjct: 1   MATASVAFKSREDHRKQIELEEARKAGLAPAELDEDGKEINPHIPQYMSSAPWYLNAERP 60

Query: 61  SLKHQRKWKSDPNYTKSWYDRGAKTFQADNYRKGACENCGAMTHNTKSCVERPRKLGAKW 120
           SLKHQRKWKSDPNYTKSWYDRGAK FQAD YRKGACENCGAMTH++KSC+ERPR++GAKW
Sbjct: 61  SLKHQRKWKSDPNYTKSWYDRGAKIFQADKYRKGACENCGAMTHDSKSCMERPRRVGAKW 120

Query: 121 TNMHIAPDEKIETFELDYDGKRDRWNGYDPATXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           TN HIAPDEKIETFELDYDGKRDRWNGYD +T                            
Sbjct: 121 TNKHIAPDEKIETFELDYDGKRDRWNGYDASTYARVIERYEARDEARKKYLKEQQLKKLE 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXAHALKVDEAKVDESKQADFAKVEKRVRXXXXXXXXXVR 240
                                    L+VDEAKVDESKQ DFAKVEKRVR         VR
Sbjct: 181 KSNQNGEDAASDEEEEEDEDEDEDDLRVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVR 240

Query: 241 NLRIREDTAKYLLNLDVNSPYYDPKTHSMREDPLPDADPNEKFYGGDNQYRMSGQALEFK 300
           NLRIREDTAKYLLNLDVNS +YDPKT SMREDPLPDADPNEKFY GDNQYR SGQALEFK
Sbjct: 241 NLRIREDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEKFYLGDNQYRNSGQALEFK 300

Query: 301 QLNIHAWEAFEKGQDVHIQAAPSQAELLYKNFKIMKEKLKSQTKDAIIQKYGNAAAQEEL 360
           +LNIHAWEAF+KGQDVH+QAAPSQAELLYKNFK+MKEKLK QTK+ II+KYGNAA +++L
Sbjct: 301 ELNIHAWEAFDKGQDVHMQAAPSQAELLYKNFKVMKEKLKYQTKETIIEKYGNAADEDKL 360

Query: 361 PKELLLGQTERQVEYDRAGRIIKGLEASLPKSKYEEDVYINNHTSIWGSWWNDHQWGYKC 420
           P+ELLLGQ+ERQVEYDRAGRIIKG E +LP+SKYEEDVYINNHT++WGSWW DHQWGYKC
Sbjct: 361 PRELLLGQSERQVEYDRAGRIIKGQEVALPRSKYEEDVYINNHTTVWGSWWKDHQWGYKC 420

Query: 421 CKQTIRNSYCTXXXXXXXXXXXXDLMKANIDRKVASEDTPAPAEEKRLATWGTDVPDDLV 480
           CKQTIRNSYCT            DLMKANI RK A+ + P P EEK+LATWGTDVPDDLV
Sbjct: 421 CKQTIRNSYCTGAAGIEAAEAASDLMKANIARKEAATEDPTPVEEKKLATWGTDVPDDLV 480

Query: 481 LDQKKLDEALXXXXXXXXXXXXXXXXXYNVRWNDEVTPEEMEAYRVKKIHHDDPMKDFLH 540
           LD+K L EAL                 YNVRWNDEVT E+MEAYR+KK+HHDDPMKDFLH
Sbjct: 481 LDEKLLAEALKKEDQRKREEKDERKRKYNVRWNDEVTAEDMEAYRMKKVHHDDPMKDFLH 540


>Glyma19g34750.1 
          Length = 286

 Score =  266 bits (681), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 154/301 (51%), Positives = 170/301 (56%), Gaps = 28/301 (9%)

Query: 61  SLKHQRKWKSDPNYTKSWYDRGAKTFQADNYRKGACENCGAMTHNTK------SCVERPR 114
           SLKH+RKWKSDPNYT SWYDRGAK FQA  YR GACEN   +  N        SCVERP 
Sbjct: 1   SLKHKRKWKSDPNYTNSWYDRGAKIFQAVRYRTGACENGIYLLFNMYLVYQLWSCVERPW 60

Query: 115 KLGAKWTNMHIAPDEKIETFELDYDGKRDRWNGYDPATXXXXXXXXXXXXXXXXXXXXXX 174
           KLGAKWTN HIA DEKIETFELDYDGKRDRWNGYD +T                      
Sbjct: 61  KLGAKWTNKHIASDEKIETFELDYDGKRDRWNGYDAST----------------YARVIE 104

Query: 175 XXXXXXXXXXXXXXXXXXXXXXXXXXXXAHALKVDEAKVDESKQADFAKVEKRVRXXXXX 234
                                          L +DEAKVDESKQ +FAKVEKRV      
Sbjct: 105 RYEARKKYLKEQKLKKSEKSNQNDEDEEEENLMLDEAKVDESKQMEFAKVEKRVSTTGGR 164

Query: 235 XXXX------VRNLRIREDTAKYLLNLDVNSPYYDPKTHSMREDPLPDADPNEKFYGGDN 288
                      RN  IREDTAKY +N  VNS + DPKT   REDPLPDADPNEKFYGGDN
Sbjct: 165 STGTELNLFFFRNQLIREDTAKYPINAAVNSAHCDPKTRFTREDPLPDADPNEKFYGGDN 224

Query: 289 QYRMSGQALEFKQLNIHAWEAFEKGQDVHIQAAPSQAELLYKNFKIMKEKLKSQTKDAII 348
           Q+R SG ALEF ++ I   +   K +    +    +    YKNFK  KEKLKSQ K+ II
Sbjct: 225 QHRNSGVALEFNEIYIMLGKHLRKDKMFTCKQLHPKLNFHYKNFKTEKEKLKSQMKETII 284

Query: 349 Q 349
           +
Sbjct: 285 E 285


>Glyma10g10070.1 
          Length = 194

 Score =  209 bits (531), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 110/176 (62%), Positives = 126/176 (71%), Gaps = 10/176 (5%)

Query: 212 KVDESKQADFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSPYYD--PKTHSM 269
           KV      +FAKVEKRV          VR +         LL   ++S  +    +  SM
Sbjct: 14  KVRFGSYIEFAKVEKRVTTTSGGSTGTVRCVS--------LLCFYLSSYLFVILSRVVSM 65

Query: 270 REDPLPDADPNEKFYGGDNQYRMSGQALEFKQLNIHAWEAFEKGQDVHIQAAPSQAELLY 329
            +  L +  P      GDNQYRMSGQALEFKQLN HAWEAFEKGQD+H+QAAPSQAELLY
Sbjct: 66  SQRILCERIPFLMLILGDNQYRMSGQALEFKQLNTHAWEAFEKGQDIHMQAAPSQAELLY 125

Query: 330 KNFKIMKEKLKSQTKDAIIQKYGNAAAQEELPKELLLGQTERQVEYDRAGRIIKGL 385
           KNFKI+KEKLKSQTK+AI++KYGNAA+QEELPKELLLGQTERQVEYDRAGRII+GL
Sbjct: 126 KNFKIIKEKLKSQTKNAIVEKYGNAASQEELPKELLLGQTERQVEYDRAGRIIEGL 181


>Glyma17g24690.1 
          Length = 329

 Score =  131 bits (330), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/181 (48%), Positives = 99/181 (54%), Gaps = 17/181 (9%)

Query: 205 ALKVDEAKVDESKQADFAKVEKRVRXXXXXXXXXVRNLRIREDTAKYLLNLDVNSPYYDP 264
           ALKVDEAKVDESKQ DFAKVEKRV           RN  IRED AKYLLNLDVNS YYDP
Sbjct: 117 ALKVDEAKVDESKQVDFAKVEKRVTTTGGGSTGTARNFHIREDIAKYLLNLDVNSAYYDP 176

Query: 265 KTHSMREDPLPDADPNEKFYGGDNQYRMSGQALEFKQLNIHAWEAFEKGQDVHIQAAPSQ 324
           K HSMREDPLP+ADP+EKFYG      M         LNI           V     P+ 
Sbjct: 177 KIHSMREDPLPNADPSEKFYGVSI---MGVGRFYLDVLNI-----------VSDIVDPA- 221

Query: 325 AELLYKNFKIMKEKLKSQTKDAIIQKYGNAAAQEELPKELLLGQTERQVEYDRAGRIIKG 384
           A +L+  F +  E  +   K     +     +     K    G  ERQV+YDRA RII+G
Sbjct: 222 ASILHLTFYLALEA-EVTNKKCHNGEVWKCCSLRRASKGASFG-AERQVKYDRADRIIEG 279

Query: 385 L 385
           L
Sbjct: 280 L 280



 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 44/53 (83%), Positives = 47/53 (88%), Gaps = 3/53 (5%)

Query: 61  SLKHQRKWKSDPNYTKSWYDRGAKTFQADNYRKGACENCGAMTH---NTKSCV 110
           SLKHQRKWKSDPNYTKSWYDRGAK FQAD YRKGACENCGAMTH   N ++C+
Sbjct: 1   SLKHQRKWKSDPNYTKSWYDRGAKIFQADKYRKGACENCGAMTHNEQNRQTCI 53