Miyakogusa Predicted Gene

Lj5g3v1176860.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1176860.1 Non Chatacterized Hit- tr|I1PTI1|I1PTI1_ORYGL
Uncharacterized protein (Fragment) OS=Oryza
glaberrima,81.13,7e-19,PAP_fibrillin,Plastid lipid-associated
protein/fibrillin conserved domain; coiled-coil,NULL;
seg,NUL,CUFF.54938.1
         (287 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma20g34960.1                                                       352   3e-97
Glyma10g32620.1                                                       287   1e-77
Glyma15g05290.1                                                        54   2e-07

>Glyma20g34960.1 
          Length = 265

 Score =  352 bits (903), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 186/238 (78%), Positives = 199/238 (83%), Gaps = 8/238 (3%)

Query: 51  RRSLLVVKSAVGEGREASVVDPPPSTPDFPWD-APSKSTLKFNLLSAVSGLNRGLAANED 109
           RR  LVVKS VG      V DP PS+  +  D + S S+LK NLLSAVSGLNRGLAA+ED
Sbjct: 35  RRPSLVVKSTVG------VADPSPSSSSYAGDTSDSISSLKLNLLSAVSGLNRGLAASED 88

Query: 110 DLQKXXXXXXXXXXXGGVVDLSVENIDKLQGRWKLIYSSAFSSRTLGGSRPGPPTGRLLP 169
           DL+K           GG+VDLS+  +D LQGRWKLIYSSAFSSRTLGGSRPGPP GRLLP
Sbjct: 89  DLRKADDAAKELEAAGGLVDLSL-GLDNLQGRWKLIYSSAFSSRTLGGSRPGPPIGRLLP 147

Query: 170 ITLGQVFQRIDVLSKDFDNIVELQLGAPWPLPPLEATATLAHKFELIGSSKIKIKFEKTT 229
           ITLGQVFQRID+LSKDFDNIVELQLGAPWPLPPLEATATLAHKFELIGSSKIKI FEKTT
Sbjct: 148 ITLGQVFQRIDILSKDFDNIVELQLGAPWPLPPLEATATLAHKFELIGSSKIKIVFEKTT 207

Query: 230 VKTLGNFSQLPPLELPRIPDALRPSSNRGSGEFEVTFLDSDTRITRGDKGELRVFVIA 287
           VKT GN SQLPPLE+PRIPDALRP SN GSGEFEVT+LDSDTRITRGD+GELRVFVIA
Sbjct: 208 VKTAGNLSQLPPLEVPRIPDALRPPSNTGSGEFEVTYLDSDTRITRGDRGELRVFVIA 265


>Glyma10g32620.1 
          Length = 220

 Score =  287 bits (734), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 142/163 (87%), Positives = 151/163 (92%), Gaps = 1/163 (0%)

Query: 125 GGVVDLSVENIDKLQGRWKLIYSSAFSSRTLGGSRPGPPTGRLLPITLGQVFQRIDVLSK 184
           GG V+LS+  ++ LQGRWKLIYSSAFSSRTLGGSRPGPP GRLLPITLGQVFQRID+LSK
Sbjct: 59  GGFVNLSL-GLENLQGRWKLIYSSAFSSRTLGGSRPGPPIGRLLPITLGQVFQRIDILSK 117

Query: 185 DFDNIVELQLGAPWPLPPLEATATLAHKFELIGSSKIKIKFEKTTVKTLGNFSQLPPLEL 244
           DFDNIVELQLGAPWPL PLE TATLAHKFELIGSSKIKI FEKTT+KT GN SQLPPLE+
Sbjct: 118 DFDNIVELQLGAPWPLQPLEVTATLAHKFELIGSSKIKIVFEKTTMKTAGNLSQLPPLEV 177

Query: 245 PRIPDALRPSSNRGSGEFEVTFLDSDTRITRGDKGELRVFVIA 287
           PRIPDALRP SN GSGEFEVT+LDSDTRITRGD+GELRVFVIA
Sbjct: 178 PRIPDALRPPSNTGSGEFEVTYLDSDTRITRGDRGELRVFVIA 220


>Glyma15g05290.1 
          Length = 245

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 86/196 (43%), Gaps = 37/196 (18%)

Query: 89  LKFNLLSAVSGLNRGLAANEDDLQKXXXXXXXXXXXGGVVDLSVENIDKLQGRWKLIYSS 148
           LK  L  A++ L+RG  A  +D Q+             V +     +  L G+W+L Y++
Sbjct: 76  LKVELYEAIAPLDRGAEATPEDQQRVDQIARKLEAVNPVKEPLKSGL--LNGKWELFYTT 133

Query: 149 AFSSRTLGGSRPGPPTGRLLPITLGQVFQRIDVLSKDFDNIVELQLGAPWPLPPLEATAT 208
             S   L   RP     +LL    G+++Q I+V +    NI        WP    +ATA 
Sbjct: 134 --SQSILQTQRP-----KLLRPN-GKIYQAINVDTLRAQNI------ETWPFYN-QATAN 178

Query: 209 LAHKFELIGSSKIKIKFEKTTVKTLGNFSQLPPLELPRIPDALRPSSNRGSGEFEVTFLD 268
           L      + S ++ +KF+          + L P++ P            G G+ E+T+LD
Sbjct: 179 LVP----LNSKRVAVKFD------FFKIASLIPIKSP----------GSGRGQLEITYLD 218

Query: 269 SDTRITRGDKGELRVF 284
            D RI+RG++G L + 
Sbjct: 219 EDLRISRGNRGNLFIL 234