Miyakogusa Predicted Gene

Lj5g3v1135080.4

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1135080.4 tr|Q53M54|Q53M54_ORYSJ Expressed protein OS=Oryza
sativa subsp. japonica GN=Os11g0247500 PE=2
SV=1,43.75,0.0000000004,seg,NULL,CUFF.54869.4
         (521 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g33160.1                                                       539   e-153
Glyma20g34480.1                                                       458   e-129

>Glyma10g33160.1 
          Length = 656

 Score =  539 bits (1389), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 316/539 (58%), Positives = 358/539 (66%), Gaps = 49/539 (9%)

Query: 27  KSGSRTGQKSKP---LDENGKFLPTLPSASKELKEKEDILGRINDNAGN----------- 72
           K  + TG+KS P    +E+GK LP LPSAS+ELKEKEDILG  NDNAG            
Sbjct: 111 KGNAGTGRKSNPCSAFNEHGKRLPRLPSASEELKEKEDILGGRNDNAGEHDAHVKLGCGA 170

Query: 73  ---------------------GEVEENSDTSICRTPPIHNSVSPEIQCVST------TPA 105
                                G+VEEN ++S  RTPPIHNS+SPEIQC S+      TPA
Sbjct: 171 VNLTPSSKKVAGSYLEDIRLFGDVEENPNSSASRTPPIHNSLSPEIQCGSSLVPKTATPA 230

Query: 106 CYGAGYIVSGVTDKRKCRPRGILTVEENCSEFAKMTADSFXXXXXXXXXX---XXXXXSP 162
           CYGAGY+VSGV DKRKCRPRGILTVE+N S   K+ A+SF                  SP
Sbjct: 231 CYGAGYVVSGVADKRKCRPRGILTVEKNYSGSDKIAANSFDDDDDDARKKVMDTNDHASP 290

Query: 163 TLLPLPTEALVRWLSSPCKKEKKILKSE--NGLNQSQGLAEXXXXXXXXXXXXXXXXFWN 220
           +LLPLPTEA+V WLSSPC K KKIL  E  NGLNQSQGLAE                FWN
Sbjct: 291 SLLPLPTEAVVHWLSSPCNKGKKILSKEFENGLNQSQGLAESTTLASSTSPSSSSKTFWN 350

Query: 221 VSDSSDLSGAANGTWSKMSSSVSPSRLSKFQVAFDSIAPPSYPSIMLSPNSTPSCRAFSS 280
           VSDSSDLSG ANG   K+SSS+SP+ L++FQV  D I  PS+ S++ SPN TP CRA SS
Sbjct: 351 VSDSSDLSGGANGIMRKISSSISPNGLAEFQVPSDYILSPSHSSLLFSPNPTPICRAGSS 410

Query: 281 AKGKSDQHRLNDDNSPFSLNSVGSRNVIQTPQSDSSSDLPVGLSLVSAYNGKEDSSNPEL 340
            KGK+DQ+ L D+NSPFSLNS GS NVIQTPQSDSSS L VGLSL  A N KED SNP L
Sbjct: 411 GKGKTDQYNLIDENSPFSLNSFGSGNVIQTPQSDSSSVLHVGLSLAHADNRKEDISNPGL 470

Query: 341 NSFSEILQSENLLLKSSMPLEDSVNSSFQFDCLTVPYESIDLSKLRKLLDDPDPWLXXXX 400
           NS S+IL SENLLL SSMPLEDSVNSSFQFDCLT+P ESIDLSKL   LD  DPWL    
Sbjct: 471 NSSSKILLSENLLLNSSMPLEDSVNSSFQFDCLTMPCESIDLSKLPNFLDGQDPWLSSST 530

Query: 401 XXXXXXXXXRISWREGSMSQLFDWDEFDCCRCLSD-EEDLGNDRGSNRLASTQTEDNADG 459
                    RISWREG MSQ ++ DEFDCCRCLSD EE++ N+ G+NR +  Q     + 
Sbjct: 531 IENASQSQMRISWREGLMSQSYELDEFDCCRCLSDEEEEIANESGTNRFSGPQVNIETND 590

Query: 460 SGKLNCDVGLSETEGNELEIDGHDKEMLPSLLSCSGAESISTDGGGLAASRDDDSDWRL 518
             KLN DVG++ETE  E EI G DKE +P+L+SCSGAESISTDGGGL AS   DSDW L
Sbjct: 591 GKKLNSDVGITETEDTEQEIHGLDKEKIPALMSCSGAESISTDGGGLVAS--GDSDWTL 647


>Glyma20g34480.1 
          Length = 568

 Score =  458 bits (1179), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 279/553 (50%), Positives = 315/553 (56%), Gaps = 122/553 (22%)

Query: 2   KKLVSDKARVNKKNPPCLYQWQSGKKSGSRTGQKSKP---LDENGKFLPTLPSASKELKE 58
           K L SDK R +KKNP CLYQWQSGKKSGSRTGQKSKP   L+E+GK L  LPSAS+ELKE
Sbjct: 96  KTLASDKKRTHKKNPLCLYQWQSGKKSGSRTGQKSKPCSALNEHGKLLHRLPSASEELKE 155

Query: 59  KEDILGRINDNAGNG-------------------------------EVEENSDTSICRTP 87
           KEDILG  NDNAG                                 +VEEN ++   RTP
Sbjct: 156 KEDILGGRNDNAGEHAHVNLGHGAVNSTPLSKKVTGSYLEDVRVFRDVEENPNSMDSRTP 215

Query: 88  PIHNSVSPEIQCVST------TPACYGAGYIVSGVTDKRKCRPRGILTVEENCSEFAKMT 141
           PIH+S+SPEIQC S+      TPACYGAGY+VSGV DKRKCRPRGILTVE+N S   K+ 
Sbjct: 216 PIHDSLSPEIQCGSSLVPKTATPACYGAGYVVSGVVDKRKCRPRGILTVEKNYSCSDKIA 275

Query: 142 ADSFXXXXXXXXXXXXXXXSPTLLPLPTEALVRWLSSPCKKEKKILKSE--NGLNQSQGL 199
           A+SF               SP+LLPLPTEA+V WLSSP  K KKI   E  NGLNQSQGL
Sbjct: 276 ANSFDNDEKKKVIDTNDHASPSLLPLPTEAVVHWLSSPFNKGKKIPSKEFGNGLNQSQGL 335

Query: 200 AEXXXXXXXXXXXXXXXXFWNVSDSSDLSGAANGTWSKMSSSVSPSRLSKFQVAFDSIAP 259
           AE                FWNVSD+ DLSG ANG   K+SSS+SP+ L++FQV  + I  
Sbjct: 336 AESTTLASSTSPSSSSKTFWNVSDNGDLSGGANGIMRKISSSISPNGLAEFQVPSNYILS 395

Query: 260 PSYPSIMLSPNSTPSCRAFSSAKGKSDQHRLNDDNSPFSLNSVGSRNVIQTPQSDSSSDL 319
           PSY S++ SPN TP CRA SS KGK+D++ L D+NSPFSLNS GS NVIQTPQSDSSSDL
Sbjct: 396 PSYSSLLFSPNPTPICRAGSSGKGKTDRYNLIDENSPFSLNSFGSGNVIQTPQSDSSSDL 455

Query: 320 PVGLSLVSAYNGKEDSSNPELNSFSEILQSENLLLKSSMPLEDSVNSSFQFDCLTVPYES 379
            VGLSL                                    DSVNSSFQFD LT+P ES
Sbjct: 456 HVGLSL------------------------------------DSVNSSFQFDFLTMPCES 479

Query: 380 IDLSKLRKLLDDPDPWLXXXXXXXXXXXXXRISWREGSMSQLFDWDEFDCCRCLSDEEDL 439
           IDLSK    L+  DPWL             RISWREG MSQ                   
Sbjct: 480 IDLSKRPNFLEGQDPWLSSSTTENASQSQMRISWREGLMSQF------------------ 521

Query: 440 GNDRGSNRLASTQTEDNADGSGKLNCDVGLSETEGNELEIDGHDKEMLPSLLSCSGAESI 499
                                     DVG++ETE  E EIDG  KE +P+L+SCSGAESI
Sbjct: 522 --------------------------DVGITETEDTEQEIDGLSKEKIPALISCSGAESI 555

Query: 500 STDGGGLAASRDD 512
           STDGG L A  DD
Sbjct: 556 STDGGSLVAPGDD 568