Miyakogusa Predicted Gene

Lj5g3v1118470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1118470.1 Non Chatacterized Hit- tr|I1IZK8|I1IZK8_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,36,6e-19,seg,NULL,CUFF.54792.1
         (271 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g18770.3                                                       178   7e-45
Glyma13g18770.1                                                       163   2e-40
Glyma03g32290.1                                                       160   1e-39
Glyma10g04520.1                                                       148   5e-36
Glyma19g35040.1                                                       114   1e-25
Glyma10g33330.1                                                        60   3e-09
Glyma20g34320.1                                                        51   2e-06

>Glyma13g18770.3 
          Length = 408

 Score =  178 bits (451), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 121/289 (41%), Positives = 144/289 (49%), Gaps = 38/289 (13%)

Query: 1   MGCFLACFGSSKRKLQRN-----------AGSCKPEKPCVSTVQDHSSKTVLIHTXXXXX 49
           MGCF  CFGSSK +  ++           + + K E+  VS VQD S+  +         
Sbjct: 1   MGCFFGCFGSSKHRNHKHKVQVCPNRANGSSNSKQEQHSVSLVQDCSTNAI-----NPIP 55

Query: 50  XXXXXXXXXXXVSTRKKVTFDSNVKTYEPVLQDEVGGLRESEEGGKVEALVKQXXXXXXX 109
                      VS+RKKVTFDSNVKTYEP+L DEV   R++EEGGK EAL +        
Sbjct: 56  QLQDKSEEQLSVSSRKKVTFDSNVKTYEPLLADEVVE-RKNEEGGKEEALAQSKSSSSEA 114

Query: 110 XXXXXXXXXXXYPPNHRYQNCRXXXXXXXXXXXXYGAXXXXXXXXXXXXXXXXXXXXMSC 169
                      YPPNHRYQNCR                                      
Sbjct: 115 SSVTSTGS---YPPNHRYQNCRNSDDEEEEIDYGDSDLSDGDDDEECNEVSEDFGEDDIV 171

Query: 170 SKATIDVDHVFAEEVESPILAFEGDVKSIGFNSNARDRSVYVHPVLNPVENLSQWKVVKG 229
           +    D DHVF EEV         DVKSIG N N RDRS YVHPVLNPVENL+QWKV+K 
Sbjct: 172 ASTAAD-DHVFVEEV---------DVKSIGSNPNVRDRSAYVHPVLNPVENLTQWKVLKA 221

Query: 230 KRTPTLRPQKENFVSS-------NHDSETGTSKKLNQELSVDASLSNWL 271
           KRTP +RPQKEN           + +S++   KKLN+E+ VDASLSNWL
Sbjct: 222 KRTP-IRPQKENDFGVGVKGSPFSLNSKSDLPKKLNREIRVDASLSNWL 269


>Glyma13g18770.1 
          Length = 1334

 Score =  163 bits (413), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/268 (42%), Positives = 134/268 (50%), Gaps = 29/268 (10%)

Query: 13   RKLQRNAGSC--KPEKPCVSTVQDHSSKTVLIHTXXXXXXXXXXXXXXXXVSTRKKVTFD 70
            R+  R  GS   K E+  VS VQD S+  +                    VS+RKKVTFD
Sbjct: 948  RQPNRANGSSNSKQEQHSVSLVQDCSTNAI-----NPIPQLQDKSEEQLSVSSRKKVTFD 1002

Query: 71   SNVKTYEPVLQDEVGGLRESEEGGKVEALVKQXXXXXXXXXXXXXXXXXXYPPNHRYQNC 130
            SNVKTYEP+L DEV   R++EEGGK EAL +                   YPPNHRYQNC
Sbjct: 1003 SNVKTYEPLLADEVVE-RKNEEGGKEEALAQSKSSSSEASSVTSTGS---YPPNHRYQNC 1058

Query: 131  RXXXXXXXXXXXXYGAXXXXXXXXXXXXXXXXXXXXMSCSKATIDVDHVFAEEVESPILA 190
            R                                      +    D DHVF EEV      
Sbjct: 1059 RNSDDEEEEIDYGDSDLSDGDDDEECNEVSEDFGEDDIVASTAAD-DHVFVEEV------ 1111

Query: 191  FEGDVKSIGFNSNARDRSVYVHPVLNPVENLSQWKVVKGKRTPTLRPQKENFVSS----- 245
               DVKSIG N N RDRS YVHPVLNPVENL+QWKV+K KRTP +RPQKEN         
Sbjct: 1112 ---DVKSIGSNPNVRDRSAYVHPVLNPVENLTQWKVLKAKRTP-IRPQKENDFGVGVKGS 1167

Query: 246  --NHDSETGTSKKLNQELSVDASLSNWL 271
              + +S++   KKLN+E+ VDASLSNWL
Sbjct: 1168 PFSLNSKSDLPKKLNREIRVDASLSNWL 1195


>Glyma03g32290.1 
          Length = 391

 Score =  160 bits (406), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/297 (39%), Positives = 140/297 (47%), Gaps = 30/297 (10%)

Query: 1   MGCFLACFGSSK-----RKLQRN---AGSCKPEKPCVS-TVQDHSSKTVLIHTXXXXXXX 51
           MGCFL CFGSSK     RK Q +       + E+P    +VQD+S   VL          
Sbjct: 1   MGCFLHCFGSSKSTKPRRKAQHHHHRIARDRLEQPTACCSVQDYSETVVL---STASQEV 57

Query: 52  XXXXXXXXXVSTRKKVTFDSNVKTYEPVLQDEVGG--LRESEEGGKVEALVKQXXXXXXX 109
                    VS +KKVTFD NVKTYEP   DEV    L  SEEG +  A V++       
Sbjct: 58  QAKPLEQINVSPKKKVTFDVNVKTYEPE-PDEVADYQLVRSEEGREESAFVEKLSQTKSY 116

Query: 110 XXXXXXXXXXXYPPNHRYQNC----------RXXXXXXXXXXXXYGAXXXXXXXXXXXXX 159
                      YP NHRY +C                                       
Sbjct: 117 SEVSSVTSARSYPTNHRYHSCTCSDDEDGAMEYWDSDVTDEDEDDDDDGDSDMGEEYDEV 176

Query: 160 XXXXXXXMSCSKATIDVDHVFAEEVESPILAFEGDVKSIGFNSNARDRSVYVHPVLNPVE 219
                  +  S++    + V   EVESPI   + D+KSIG NSN RDRSVYV+P+LNPVE
Sbjct: 177 EEDFEDGIVYSRSRNGANQVVVGEVESPIPMHDKDLKSIGLNSNVRDRSVYVNPLLNPVE 236

Query: 220 NLSQWKVVKGKRTPTLRPQKENFVSSNHD-----SETGTSKKLNQELSVDASLSNWL 271
           NL+QWK VK KR P L  QKEN V +        +ET T KKLN+E++VDASLSNWL
Sbjct: 237 NLTQWKTVKAKRAPPLVSQKENLVLNQESRAAFGAETETPKKLNREIAVDASLSNWL 293


>Glyma10g04520.1 
          Length = 1248

 Score =  148 bits (374), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/226 (45%), Positives = 114/226 (50%), Gaps = 35/226 (15%)

Query: 61   VSTRKKVTFDSNVKTYEPVLQDEVGGLRESEEGGKVEALVKQXXXXXXXXXXXXXXXXXX 120
            VS+RKKVTFDSNVKTYEPVL DEV       E    +AL +                   
Sbjct: 904  VSSRKKVTFDSNVKTYEPVLADEVV------ERKNEQALAQPKSSSSEDSSVTSTGSN-- 955

Query: 121  YPPNHRYQNCRXXXXXXXXXXXXYGAXXXXXXXXXXXXXXXXXXXXMS-------CSKAT 173
             PPNHRYQNCR            YG                     +S           T
Sbjct: 956  -PPNHRYQNCRDSDDEEEEID--YGDSDLSDGDEDDDDAIKEECNEVSEDFGEDGIVATT 1012

Query: 174  IDVDHVFAEEVESPILAFEGDVKSIGFNSNARDRSVYVHPVLNPVENLSQWKVVKGKRTP 233
            +  DHVF EE        E  VKSIG N N RDRS YVHPVLNPVENL+QWKV+K KRTP
Sbjct: 1013 VSDDHVFVEE--------EVSVKSIGSNPNVRDRSAYVHPVLNPVENLTQWKVLKAKRTP 1064

Query: 234  TLRPQKENFVS--------SNHDSETGTSKKLNQELSVDASLSNWL 271
             +RPQKEN           S + SE+ T KKLN+E+ VDASLSNWL
Sbjct: 1065 -IRPQKENDFGVGVKGSPFSLNYSESDTPKKLNREIRVDASLSNWL 1109


>Glyma19g35040.1 
          Length = 374

 Score =  114 bits (285), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/99 (60%), Positives = 70/99 (70%), Gaps = 5/99 (5%)

Query: 177 DHVFAEEVESPILAFEGDVKSIGFNSNARDRSVYVHPVLNPVENLSQWKVVKGKRTPTLR 236
           + V   EVESPIL  + D+KSIG N N RDRSVYV  V+NPVENL+QWK VK KR P L 
Sbjct: 188 NQVVVGEVESPILMHDKDLKSIGLNPNVRDRSVYVLSVMNPVENLTQWKAVKAKRAPPLA 247

Query: 237 PQKENFVSSNHDSETG----TSKKLNQELSVDASLSNWL 271
            QKEN V  N +S +     T KKLN+E++VDASLSNWL
Sbjct: 248 SQKENLV-LNQESRSAFAAETPKKLNREIAVDASLSNWL 285



 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/136 (38%), Positives = 67/136 (49%), Gaps = 12/136 (8%)

Query: 1   MGCFLACFGSSK----RKLQRNAGSCKPEKPCVSTVQDHSSKTVLIHTXXXXXXXXXXXX 56
           MGCFL CFGSSK    R+   +      ++    ++QD+S +TV+I T            
Sbjct: 1   MGCFLHCFGSSKSTKPRRKAHHHHRLARDRLEQCSIQDYS-ETVVIGTASQEVQAKPLEQ 59

Query: 57  XXXXVSTRKKVTFDSNVKTYEPVLQDEVGG--LRESEEGGKVEALVKQXXXXXXXXXXXX 114
               VS +KKVTFD NVKTYEP   DEV    L +SEEGG+  ALV++            
Sbjct: 60  IN--VSPKKKVTFDVNVKTYEP---DEVADFQLEKSEEGGEESALVEKLSRTKSYSEESS 114

Query: 115 XXXXXXYPPNHRYQNC 130
                 Y  NHRY NC
Sbjct: 115 VTSAGSYTTNHRYHNC 130


>Glyma10g33330.1 
          Length = 184

 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 49/97 (50%), Gaps = 19/97 (19%)

Query: 194 DVKSIGFNSNARDRSVYVHPVLNPVENLSQWKVVKGKRTPTLRP-QKENFVSSNH----- 247
           D   +  N   RDRS  +H VL PVENL+QWK +K K  P+ +  +KEN  S  H     
Sbjct: 73  DDAKLKSNLRGRDRSTGMHSVLIPVENLTQWKAIKTKVAPSSKHRRKENVPSKQHTSMPS 132

Query: 248 -------------DSETGTSKKLNQELSVDASLSNWL 271
                        +S    SK L  E+SVDASLSNWL
Sbjct: 133 VSEASLNFSPCSLESNALQSKPLLPEISVDASLSNWL 169


>Glyma20g34320.1 
          Length = 275

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 50/99 (50%), Gaps = 22/99 (22%)

Query: 192 EGDVKSIGFNSNARDRSVYVHPVLNPVENLSQWKVVKGKRTPTLR-PQKENFVSSNH--- 247
           E ++KS   N +  DRS  +H VL PVENL+QWK +K K   + +  +KEN  S  H   
Sbjct: 165 EAELKS---NLSGGDRSKDMHSVLIPVENLTQWKAIKTKVVSSSKHTRKENVPSKQHTNM 221

Query: 248 ---------------DSETGTSKKLNQELSVDASLSNWL 271
                          +S    S  L  E++VDASLSNWL
Sbjct: 222 PLVSEASLNFSPCSLESNALQSMPLLPEIAVDASLSNWL 260