Miyakogusa Predicted Gene

Lj5g3v1118400.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1118400.1 Non Chatacterized Hit- tr|Q8L8R3|Q8L8R3_ARATH
Putative uncharacterized protein OS=Arabidopsis
thalia,40.48,2e-18,seg,NULL,CUFF.54784.1
         (172 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g18740.1                                                       141   4e-34
Glyma10g04490.1                                                       130   7e-31
Glyma03g32230.1                                                        70   2e-12
Glyma20g34910.1                                                        58   4e-09

>Glyma13g18740.1 
          Length = 156

 Score =  141 bits (355), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/184 (52%), Positives = 103/184 (55%), Gaps = 40/184 (21%)

Query: 1   MNTKTMRLPPRRVLTPSTTTNKRKERDGPFERPAPVSIPIPVPGPTSKLPKPDNKPITPR 60
           MNTKTMRLPPRRVLTPS  +NKRKERD PF+RP   SIP P   P +KLPKPD KPI   
Sbjct: 1   MNTKTMRLPPRRVLTPSGPSNKRKERDEPFDRPK--SIPAP---PINKLPKPD-KPIP-- 52

Query: 61  LGAEPIQNTAAGATTSKVSVSEPMMMPPSNQLLAGYLAHEYLTKGTLLGQPWVPAK---- 116
                              +SEP    PSNQLLAGYLAHE+LTKGTLLGQPW P K    
Sbjct: 53  -----------------WPISEPK---PSNQLLAGYLAHEFLTKGTLLGQPWAPPKGKSS 92

Query: 117 ---TDG-----PTKXXXXXXXXXXXXXXXXXXXXXXXXXXLLRGGGTHLPGVVNPTQLAR 168
               DG     PT                           LL+GGGTH PGVVNPTQLAR
Sbjct: 93  ASTEDGGEEGEPTTTAATAAATPCRKTTAEERERYAEVAGLLKGGGTHFPGVVNPTQLAR 152

Query: 169 FLHL 172
           FLHL
Sbjct: 153 FLHL 156


>Glyma10g04490.1 
          Length = 157

 Score =  130 bits (327), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 87/184 (47%), Positives = 100/184 (54%), Gaps = 41/184 (22%)

Query: 1   MNTKTMRLPPRRVLTPSTTTNKRKERDGPFERPAPVSIPIPVPGPTSKLPKPDNKPITPR 60
           MNTKTMRLPPRRVLTP+ T+NKRKERD  F+RP P+  P     P +KLPKPD +PI+  
Sbjct: 1   MNTKTMRLPPRRVLTPTGTSNKRKERDETFDRPKPIPAP-----PLNKLPKPD-RPIS-- 52

Query: 61  LGAEPIQNTAAGATTSKVSVSEPMMMPPSNQLLAGYLAHEYLTKGTLLGQPWVPAK---- 116
                            + ++E    P SNQLLAGYLAHE+LTKGTLLGQPW P K    
Sbjct: 53  -----------------LPLTE--AKPSSNQLLAGYLAHEFLTKGTLLGQPWAPPKGKSL 93

Query: 117 ----TDGPTKXX------XXXXXXXXXXXXXXXXXXXXXXXXLLRGGGTHLPGVVNPTQL 166
                DG  +                                LL+GGGTH PGVVNPTQL
Sbjct: 94  STSTEDGGEEGEPTATTTTAAAAKPCRKTTAEERERYAEVAGLLKGGGTHFPGVVNPTQL 153

Query: 167 ARFL 170
           ARFL
Sbjct: 154 ARFL 157


>Glyma03g32230.1 
          Length = 123

 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/172 (34%), Positives = 72/172 (41%), Gaps = 49/172 (28%)

Query: 1   MNTKTMRLPPRRVLTPSTTTNKRKERDGPFERPAPVSIPIPVPGPTSKLPKPDNKPITPR 60
           M+TKTMR P RRV   +++ +KRKERD     P P S P     P+ K P P        
Sbjct: 1   MSTKTMRPPSRRVPLSNSSGSKRKERDQ--ASPRPKSSPTITKLPSDKSPNP-------- 50

Query: 61  LGAEPIQNTAAGATTSKVSVSEPMMMPPSNQLLAGYLAHEYLTKGTLLGQPWVPAKTDGP 120
                                      P+N LLAGYLAHE+LTKGTLLG+     +   P
Sbjct: 51  --------------------------VPTNMLLAGYLAHEFLTKGTLLGRKM--GQAPSP 82

Query: 121 TKXXXXXXXXXXXXXXXXXXXXXXXXXXLLRGGGTHLPGVVNPTQLARFLHL 172
            K                          LL+  G HL  +VNPTQLA FL L
Sbjct: 83  RKESQQQKYDRYVELSL-----------LLKTNGAHLGEIVNPTQLAHFLKL 123


>Glyma20g34910.1 
          Length = 110

 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 43/85 (50%), Gaps = 12/85 (14%)

Query: 87  PPSNQLLAGYLAHEYLTKGTLLGQPWVPAKTDGPTKXXXXXXXXXXXXXXXXXXXXXXXX 146
           P SN+LLAGYLAHE+LTKGTLLGQ +    T                             
Sbjct: 35  PSSNRLLAGYLAHEFLTKGTLLGQKFEFDLTRSGV------------AEPKREQDNYKEV 82

Query: 147 XXLLRGGGTHLPGVVNPTQLARFLH 171
             LLR  GTH+ G+VNPTQL  +++
Sbjct: 83  ANLLRTKGTHVKGIVNPTQLFNWIN 107