Miyakogusa Predicted Gene

Lj5g3v1096020.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1096020.1 tr|A8XKX1|A8XKX1_CAEBR Protein CBR-OSTD-1
OS=Caenorhabditis briggsae GN=ostd-1 PE=4 SV=2,39.47,9e-19,seg,NULL;
Ribophorin_II,Ribophorin II; SUBFAMILY NOT NAMED,NULL; RIBOPHORIN
II,Ribophorin II,CUFF.54770.1
         (155 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g32140.2                                                       171   2e-43
Glyma03g32140.1                                                       171   2e-43
Glyma19g34900.1                                                       166   9e-42
Glyma10g04380.1                                                       156   9e-39

>Glyma03g32140.2 
          Length = 687

 Score =  171 bits (434), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 93/155 (60%), Positives = 98/155 (63%)

Query: 1   MENSFLRLIGHVELDFPEAPEKAARPPTPPVDPYSRYGPKAEINHIFRVPEKRPAQEXXX 60
           MENSFLRL+G V+LD PEAPEKAAR P  PVDPYSRYGPKAEI H+FR PEKRP QE   
Sbjct: 533 MENSFLRLLGEVDLDLPEAPEKAARLPPLPVDPYSRYGPKAEIAHLFRAPEKRPPQELSL 592

Query: 61  XXXXXXXXXXXXXXXXXXRLGVNLKNFPSSTVPATFAILFHGGIAAVXXXXXXXXXXXXX 120
                             RLGVNLKNFPSS VPAT+A LFH GIAAV             
Sbjct: 593 TFLGLILLPFIGFLVGLLRLGVNLKNFPSSAVPATYAFLFHLGIAAVLLLYVLFWLKLDL 652

Query: 121 FTTLKXXXXXXXXXXXVGHRILSHLAHTSAKLKSA 155
           FTTLK           VGHRILSHLA TS+KLKSA
Sbjct: 653 FTTLKTVGFLGAFLLFVGHRILSHLASTSSKLKSA 687


>Glyma03g32140.1 
          Length = 687

 Score =  171 bits (434), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 93/155 (60%), Positives = 98/155 (63%)

Query: 1   MENSFLRLIGHVELDFPEAPEKAARPPTPPVDPYSRYGPKAEINHIFRVPEKRPAQEXXX 60
           MENSFLRL+G V+LD PEAPEKAAR P  PVDPYSRYGPKAEI H+FR PEKRP QE   
Sbjct: 533 MENSFLRLLGEVDLDLPEAPEKAARLPPLPVDPYSRYGPKAEIAHLFRAPEKRPPQELSL 592

Query: 61  XXXXXXXXXXXXXXXXXXRLGVNLKNFPSSTVPATFAILFHGGIAAVXXXXXXXXXXXXX 120
                             RLGVNLKNFPSS VPAT+A LFH GIAAV             
Sbjct: 593 TFLGLILLPFIGFLVGLLRLGVNLKNFPSSAVPATYAFLFHLGIAAVLLLYVLFWLKLDL 652

Query: 121 FTTLKXXXXXXXXXXXVGHRILSHLAHTSAKLKSA 155
           FTTLK           VGHRILSHLA TS+KLKSA
Sbjct: 653 FTTLKTVGFLGAFLLFVGHRILSHLASTSSKLKSA 687


>Glyma19g34900.1 
          Length = 763

 Score =  166 bits (420), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 90/155 (58%), Positives = 95/155 (61%)

Query: 1   MENSFLRLIGHVELDFPEAPEKAARPPTPPVDPYSRYGPKAEINHIFRVPEKRPAQEXXX 60
           MENSFL L+G V+LD PEAPEKAAR P  PVDPYSRYGPKAEI H+FR PEKRP QE   
Sbjct: 609 MENSFLWLLGQVDLDLPEAPEKAARLPPLPVDPYSRYGPKAEIAHLFRAPEKRPPQELSL 668

Query: 61  XXXXXXXXXXXXXXXXXXRLGVNLKNFPSSTVPATFAILFHGGIAAVXXXXXXXXXXXXX 120
                             RLGVNLKNFPSS VPA +AILF  GIA V             
Sbjct: 669 TFLGLTLLPFIGFLVGLLRLGVNLKNFPSSAVPAAYAILFQLGIATVLLLYVLFWLKLDL 728

Query: 121 FTTLKXXXXXXXXXXXVGHRILSHLAHTSAKLKSA 155
           FTTLK           VGHRILSHLA TS+KLKSA
Sbjct: 729 FTTLKTVGFLGAFLLFVGHRILSHLASTSSKLKSA 763


>Glyma10g04380.1 
          Length = 689

 Score =  156 bits (394), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 99/155 (63%), Positives = 100/155 (64%)

Query: 1   MENSFLRLIGHVELDFPEAPEKAARPPTPPVDPYSRYGPKAEINHIFRVPEKRPAQEXXX 60
           MENSFLRL+GHVELD PEAPEKA RPP PPVDPYSRYGPKAEI HIFR PEKRP QE   
Sbjct: 535 MENSFLRLLGHVELDLPEAPEKAPRPPPPPVDPYSRYGPKAEITHIFRSPEKRPHQELSL 594

Query: 61  XXXXXXXXXXXXXXXXXXRLGVNLKNFPSSTVPATFAILFHGGIAAVXXXXXXXXXXXXX 120
                             RLGVNLKNFP STVPATF ILFH GIAAV             
Sbjct: 595 AFLGLILLPFIGFLVGLLRLGVNLKNFPGSTVPATFGILFHVGIAAVLLLYVLFWLKLDL 654

Query: 121 FTTLKXXXXXXXXXXXVGHRILSHLAHTSAKLKSA 155
           FTTLK           VGHRILSHLA TSAKLKSA
Sbjct: 655 FTTLKAFGLLGAILMFVGHRILSHLAFTSAKLKSA 689