Miyakogusa Predicted Gene
- Lj5g3v1096020.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1096020.1 tr|A8XKX1|A8XKX1_CAEBR Protein CBR-OSTD-1
OS=Caenorhabditis briggsae GN=ostd-1 PE=4 SV=2,39.47,9e-19,seg,NULL;
Ribophorin_II,Ribophorin II; SUBFAMILY NOT NAMED,NULL; RIBOPHORIN
II,Ribophorin II,CUFF.54770.1
(155 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma03g32140.2 171 2e-43
Glyma03g32140.1 171 2e-43
Glyma19g34900.1 166 9e-42
Glyma10g04380.1 156 9e-39
>Glyma03g32140.2
Length = 687
Score = 171 bits (434), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/155 (60%), Positives = 98/155 (63%)
Query: 1 MENSFLRLIGHVELDFPEAPEKAARPPTPPVDPYSRYGPKAEINHIFRVPEKRPAQEXXX 60
MENSFLRL+G V+LD PEAPEKAAR P PVDPYSRYGPKAEI H+FR PEKRP QE
Sbjct: 533 MENSFLRLLGEVDLDLPEAPEKAARLPPLPVDPYSRYGPKAEIAHLFRAPEKRPPQELSL 592
Query: 61 XXXXXXXXXXXXXXXXXXRLGVNLKNFPSSTVPATFAILFHGGIAAVXXXXXXXXXXXXX 120
RLGVNLKNFPSS VPAT+A LFH GIAAV
Sbjct: 593 TFLGLILLPFIGFLVGLLRLGVNLKNFPSSAVPATYAFLFHLGIAAVLLLYVLFWLKLDL 652
Query: 121 FTTLKXXXXXXXXXXXVGHRILSHLAHTSAKLKSA 155
FTTLK VGHRILSHLA TS+KLKSA
Sbjct: 653 FTTLKTVGFLGAFLLFVGHRILSHLASTSSKLKSA 687
>Glyma03g32140.1
Length = 687
Score = 171 bits (434), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/155 (60%), Positives = 98/155 (63%)
Query: 1 MENSFLRLIGHVELDFPEAPEKAARPPTPPVDPYSRYGPKAEINHIFRVPEKRPAQEXXX 60
MENSFLRL+G V+LD PEAPEKAAR P PVDPYSRYGPKAEI H+FR PEKRP QE
Sbjct: 533 MENSFLRLLGEVDLDLPEAPEKAARLPPLPVDPYSRYGPKAEIAHLFRAPEKRPPQELSL 592
Query: 61 XXXXXXXXXXXXXXXXXXRLGVNLKNFPSSTVPATFAILFHGGIAAVXXXXXXXXXXXXX 120
RLGVNLKNFPSS VPAT+A LFH GIAAV
Sbjct: 593 TFLGLILLPFIGFLVGLLRLGVNLKNFPSSAVPATYAFLFHLGIAAVLLLYVLFWLKLDL 652
Query: 121 FTTLKXXXXXXXXXXXVGHRILSHLAHTSAKLKSA 155
FTTLK VGHRILSHLA TS+KLKSA
Sbjct: 653 FTTLKTVGFLGAFLLFVGHRILSHLASTSSKLKSA 687
>Glyma19g34900.1
Length = 763
Score = 166 bits (420), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 90/155 (58%), Positives = 95/155 (61%)
Query: 1 MENSFLRLIGHVELDFPEAPEKAARPPTPPVDPYSRYGPKAEINHIFRVPEKRPAQEXXX 60
MENSFL L+G V+LD PEAPEKAAR P PVDPYSRYGPKAEI H+FR PEKRP QE
Sbjct: 609 MENSFLWLLGQVDLDLPEAPEKAARLPPLPVDPYSRYGPKAEIAHLFRAPEKRPPQELSL 668
Query: 61 XXXXXXXXXXXXXXXXXXRLGVNLKNFPSSTVPATFAILFHGGIAAVXXXXXXXXXXXXX 120
RLGVNLKNFPSS VPA +AILF GIA V
Sbjct: 669 TFLGLTLLPFIGFLVGLLRLGVNLKNFPSSAVPAAYAILFQLGIATVLLLYVLFWLKLDL 728
Query: 121 FTTLKXXXXXXXXXXXVGHRILSHLAHTSAKLKSA 155
FTTLK VGHRILSHLA TS+KLKSA
Sbjct: 729 FTTLKTVGFLGAFLLFVGHRILSHLASTSSKLKSA 763
>Glyma10g04380.1
Length = 689
Score = 156 bits (394), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 99/155 (63%), Positives = 100/155 (64%)
Query: 1 MENSFLRLIGHVELDFPEAPEKAARPPTPPVDPYSRYGPKAEINHIFRVPEKRPAQEXXX 60
MENSFLRL+GHVELD PEAPEKA RPP PPVDPYSRYGPKAEI HIFR PEKRP QE
Sbjct: 535 MENSFLRLLGHVELDLPEAPEKAPRPPPPPVDPYSRYGPKAEITHIFRSPEKRPHQELSL 594
Query: 61 XXXXXXXXXXXXXXXXXXRLGVNLKNFPSSTVPATFAILFHGGIAAVXXXXXXXXXXXXX 120
RLGVNLKNFP STVPATF ILFH GIAAV
Sbjct: 595 AFLGLILLPFIGFLVGLLRLGVNLKNFPGSTVPATFGILFHVGIAAVLLLYVLFWLKLDL 654
Query: 121 FTTLKXXXXXXXXXXXVGHRILSHLAHTSAKLKSA 155
FTTLK VGHRILSHLA TSAKLKSA
Sbjct: 655 FTTLKAFGLLGAILMFVGHRILSHLAFTSAKLKSA 689