Miyakogusa Predicted Gene

Lj5g3v1073880.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1073880.1 Non Chatacterized Hit- tr|I1IVM3|I1IVM3_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,62.12,3e-17,LexA/Signal peptidase,Peptidase S24/S26A/S26B/S26C; no
description,Peptidase S24/S26A/S26B/S26C, bet,CUFF.54750.1
         (205 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g06440.1                                                       340   9e-94
Glyma13g18490.1                                                       317   5e-87
Glyma03g32050.1                                                       125   3e-29
Glyma19g34800.1                                                        71   1e-12
Glyma13g26010.1                                                        54   1e-07
Glyma13g25940.1                                                        54   1e-07
Glyma13g26010.4                                                        52   6e-07
Glyma13g26010.3                                                        52   6e-07

>Glyma12g06440.1 
          Length = 204

 Score =  340 bits (871), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 174/205 (84%), Positives = 185/205 (90%), Gaps = 1/205 (0%)

Query: 1   MVSLSTWFRYIGYKLEYSVSLSWKNYKRGQIGEGEVRDLVWKNFFQGKLTYLHWNQGEEM 60
           MVSLSTWFRYI +KLEYS SLSWKNYK GQI + EVRD+VWKNFFQGKLTYLHWN+GEEM
Sbjct: 1   MVSLSTWFRYIAHKLEYSFSLSWKNYKGGQITDREVRDVVWKNFFQGKLTYLHWNKGEEM 60

Query: 61  APTIAGKVATLLVRKLPNADPTRVFVGDVVVLKDPWKPDNYLVRRLAAVEGYEMASTDEK 120
           APTI GK  TL VRKLP  DPTRVFVGDVVV+KDP KPDNYL+RRL AVEGYEM STDEK
Sbjct: 61  APTIDGKAVTL-VRKLPVVDPTRVFVGDVVVVKDPEKPDNYLLRRLTAVEGYEMVSTDEK 119

Query: 121 DEPFVLEKDQCWVVAENEKFKPKEANDSRTFGPVQMTDIVGRVIYCLRNAVDHGRVQNSH 180
           DE FVLEKDQCWVVAENEK K KEA DSRTFGPVQMTDIVGRVIYCLR+AVDHGRVQNS+
Sbjct: 120 DEAFVLEKDQCWVVAENEKLKAKEAKDSRTFGPVQMTDIVGRVIYCLRSAVDHGRVQNSY 179

Query: 181 YSMPKDSPVLEVELDVDEMAKNHKA 205
           + M KD+PVLEVELDVDEMAK+HKA
Sbjct: 180 FGMRKDTPVLEVELDVDEMAKSHKA 204


>Glyma13g18490.1 
          Length = 204

 Score =  317 bits (812), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 156/205 (76%), Positives = 170/205 (82%), Gaps = 1/205 (0%)

Query: 1   MVSLSTWFRYIGYKLEYSVSLSWKNYKRGQIGEGEVRDLVWKNFFQGKLTYLHWNQGEEM 60
           MVSL TWFRY  +K+ YSVSL+ KN K   I   E+ D VWKNFF GKLTYL WN+GEEM
Sbjct: 1   MVSLPTWFRYFHHKVGYSVSLAVKNNKGDPITAREINDAVWKNFFLGKLTYLLWNKGEEM 60

Query: 61  APTIAGKVATLLVRKLPNADPTRVFVGDVVVLKDPWKPDNYLVRRLAAVEGYEMASTDEK 120
           APTI GK  TL VRKLP  DPT VFVGDVVV+KDP KPDNYL+RRL A+EGYE+ STDEK
Sbjct: 61  APTIDGKAVTL-VRKLPAVDPTSVFVGDVVVMKDPEKPDNYLLRRLTAIEGYEVVSTDEK 119

Query: 121 DEPFVLEKDQCWVVAENEKFKPKEANDSRTFGPVQMTDIVGRVIYCLRNAVDHGRVQNSH 180
           DEPF+LEKDQCWV AENEK   KEA DSRTFGPVQMTDIVGRVIYCLR+AVDHGRVQNS 
Sbjct: 120 DEPFILEKDQCWVEAENEKLNAKEAKDSRTFGPVQMTDIVGRVIYCLRSAVDHGRVQNSD 179

Query: 181 YSMPKDSPVLEVELDVDEMAKNHKA 205
           + M  D+PVLEVELDVDEMAK+HKA
Sbjct: 180 FGMRNDTPVLEVELDVDEMAKSHKA 204


>Glyma03g32050.1 
          Length = 140

 Score =  125 bits (314), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/140 (52%), Positives = 87/140 (62%), Gaps = 19/140 (13%)

Query: 84  VFVGDVVVLKDPWKPDNYLVRRLAAVEGYEMASTDEKDEPFVLEKDQCWVVAENEKFKPK 143
           VFVGD+VVLK+P K DNYLVR+L  ++  +     ++  PF LEKDQCWV AEN+  KPK
Sbjct: 2   VFVGDLVVLKNPLKADNYLVRQLTVLKVMKWYQLMKRMNPFFLEKDQCWVDAENKSLKPK 61

Query: 144 E----------------ANDSRTFGPVQMTDIVGRVIYCLR--NAVDHGRVQNSHYSMPK 185
           +                   SR FGPV MTDIVGRVIY LR  N      V+  H SM K
Sbjct: 62  DNMVSFDLSLKSKVNVSIKTSRLFGPVNMTDIVGRVIYRLRTLNFYLISYVK-CHSSMLK 120

Query: 186 DSPVLEVELDVDEMAKNHKA 205
           D PVL VELDV+EM+KNHKA
Sbjct: 121 DWPVLAVELDVEEMSKNHKA 140


>Glyma19g34800.1 
          Length = 53

 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/55 (70%), Positives = 41/55 (74%), Gaps = 3/55 (5%)

Query: 144 EANDSRTFGPVQMTDIVGRVIYCLRNAVDHGRVQNSHYSMPKDSPVLEVELDVDE 198
           EA DSR FGPV MTDIVGRVIY LR  VDHG V+N   SM K  PVL VELDV+E
Sbjct: 1   EAKDSRLFGPVNMTDIVGRVIYRLRTCVDHGCVRN---SMLKIWPVLAVELDVEE 52


>Glyma13g26010.1 
          Length = 179

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 26/130 (20%)

Query: 57  GEEMAPTIAGKVATLLVRKLPNADPTRVFVGDVVVLKDPWKPDNYLVRRLAAVEG----- 111
           G  M PTI  K A  L+ K+ +    +V  GD+VVL++P  P +++ +R+  +EG     
Sbjct: 41  GPSMLPTIDLKTAVFLMEKI-SPRFGKVTCGDIVVLRNPQHPRHFMTKRVVGLEGDSVTY 99

Query: 112 ------YE--------MASTD--EKDEPFVLEKDQCWVVAENEKFKPKEANDSRTFGPVQ 155
                 YE        ++S D  +K +  V+ K   WV  +N+      +NDSR FGPV 
Sbjct: 100 ISNPETYEYEGDSFTHISSPDNGDKSKTIVVPKGAVWVEGDNK----YNSNDSRKFGPVP 155

Query: 156 MTDIVGRVIY 165
              I G++ +
Sbjct: 156 YDLIDGKMFW 165


>Glyma13g25940.1 
          Length = 179

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 26/130 (20%)

Query: 57  GEEMAPTIAGKVATLLVRKLPNADPTRVFVGDVVVLKDPWKPDNYLVRRLAAVEG----- 111
           G  M PTI  K A  L+ K+ +    +V  GD+VVL++P  P +++ +R+  +EG     
Sbjct: 41  GPSMLPTIDLKTAVFLMEKI-SPRFGKVTCGDIVVLRNPQHPRHFMTKRVVGLEGDSVTY 99

Query: 112 ------YE--------MASTD--EKDEPFVLEKDQCWVVAENEKFKPKEANDSRTFGPVQ 155
                 YE        ++S D  +K +  V+ K   WV  +N+      +NDSR FGPV 
Sbjct: 100 ISNPETYEYEGDSFTHISSPDNGDKSKTIVVPKGAVWVEGDNK----YNSNDSRKFGPVP 155

Query: 156 MTDIVGRVIY 165
              I G++ +
Sbjct: 156 YDLIDGKMFW 165


>Glyma13g26010.4 
          Length = 136

 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 26/127 (20%)

Query: 60  MAPTIAGKVATLLVRKLPNADPTRVFVGDVVVLKDPWKPDNYLVRRLAAVEG-------- 111
           M PTI  K A  L+ K+ +    +V  GD+VVL++P  P +++ +R+  +EG        
Sbjct: 1   MLPTIDLKTAVFLMEKI-SPRFGKVTCGDIVVLRNPQHPRHFMTKRVVGLEGDSVTYISN 59

Query: 112 ---YE--------MASTD--EKDEPFVLEKDQCWVVAENEKFKPKEANDSRTFGPVQMTD 158
              YE        ++S D  +K +  V+ K   WV  +N+      +NDSR FGPV    
Sbjct: 60  PETYEYEGDSFTHISSPDNGDKSKTIVVPKGAVWVEGDNK----YNSNDSRKFGPVPYDL 115

Query: 159 IVGRVIY 165
           I G++ +
Sbjct: 116 IDGKMFW 122


>Glyma13g26010.3 
          Length = 136

 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 26/127 (20%)

Query: 60  MAPTIAGKVATLLVRKLPNADPTRVFVGDVVVLKDPWKPDNYLVRRLAAVEG-------- 111
           M PTI  K A  L+ K+ +    +V  GD+VVL++P  P +++ +R+  +EG        
Sbjct: 1   MLPTIDLKTAVFLMEKI-SPRFGKVTCGDIVVLRNPQHPRHFMTKRVVGLEGDSVTYISN 59

Query: 112 ---YE--------MASTD--EKDEPFVLEKDQCWVVAENEKFKPKEANDSRTFGPVQMTD 158
              YE        ++S D  +K +  V+ K   WV  +N+      +NDSR FGPV    
Sbjct: 60  PETYEYEGDSFTHISSPDNGDKSKTIVVPKGAVWVEGDNK----YNSNDSRKFGPVPYDL 115

Query: 159 IVGRVIY 165
           I G++ +
Sbjct: 116 IDGKMFW 122