Miyakogusa Predicted Gene

Lj5g3v1049250.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1049250.1 tr|D7LIS0|D7LIS0_ARALL Lipase class 3 family
protein OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRA,57.14,1e-17,CGI-141 RELATED,NULL; CGI-141-RELATED/LIPASE
CONTAINING PROTEIN,NULL,99985_g.1
         (84 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g04060.1                                                       127   3e-30
Glyma13g18220.1                                                       125   1e-29
Glyma13g05400.1                                                        69   2e-12

>Glyma10g04060.1 
          Length = 506

 Score =  127 bits (318), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 60/76 (78%), Positives = 65/76 (85%), Gaps = 1/76 (1%)

Query: 9   AVSEELYIPGTVYYLKRNSGSQNNVGKDFFTLLKMQSGEHFPRIILSGNFITDHRCDSHN 68
           AV EEL+IPGTVYYLKRN  SQN VGKDFFTL K + GEHF ++I SGNFITDHRCDSH 
Sbjct: 428 AVIEELFIPGTVYYLKRNLASQN-VGKDFFTLYKREPGEHFQKVIFSGNFITDHRCDSHY 486

Query: 69  YALRDVLKGLPWYGEE 84
           YALRDVLKGLPW G+E
Sbjct: 487 YALRDVLKGLPWCGKE 502


>Glyma13g18220.1 
          Length = 513

 Score =  125 bits (314), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 56/73 (76%), Positives = 63/73 (86%)

Query: 12  EELYIPGTVYYLKRNSGSQNNVGKDFFTLLKMQSGEHFPRIILSGNFITDHRCDSHNYAL 71
           EEL+IPGTVYYLKRN GSQ + GKDFFTL K + GEHF ++I SGNFITDHRCDSH YAL
Sbjct: 437 EELFIPGTVYYLKRNLGSQIDAGKDFFTLYKREPGEHFQKVIFSGNFITDHRCDSHYYAL 496

Query: 72  RDVLKGLPWYGEE 84
           RDVLKG+PW G+E
Sbjct: 497 RDVLKGVPWCGKE 509


>Glyma13g05400.1 
          Length = 75

 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 29/42 (69%), Positives = 34/42 (80%)

Query: 31 NNVGKDFFTLLKMQSGEHFPRIILSGNFITDHRCDSHNYALR 72
           +V KDFFTL K +SGEHF ++I  GNFITDH+CDSH YALR
Sbjct: 33 TDVSKDFFTLYKRESGEHFQKVIFLGNFITDHKCDSHYYALR 74