Miyakogusa Predicted Gene

Lj5g3v1015870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1015870.1 Non Chatacterized Hit- tr|I3SNQ1|I3SNQ1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.34,0,Ribosomal_S19,Ribosomal protein S19/S15; no
description,Ribosomal protein S19, superfamily; rpsS_arc,CUFF.54710.1
         (151 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g39980.1                                                       288   1e-78
Glyma17g00820.1                                                       285   1e-77
Glyma08g04690.1                                                       281   2e-76
Glyma08g04690.2                                                       281   2e-76
Glyma05g35030.1                                                       280   3e-76
Glyma17g00820.2                                                       238   2e-63
Glyma13g10060.1                                                       139   9e-34
Glyma17g29350.1                                                       119   2e-27
Glyma16g17180.1                                                        87   9e-18
Glyma12g21100.1                                                        70   1e-12
Glyma12g18160.1                                                        51   4e-07

>Glyma07g39980.1 
          Length = 158

 Score =  288 bits (738), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 147/158 (93%), Positives = 148/158 (93%), Gaps = 7/158 (4%)

Query: 1   MADVETDVAA-------GVPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQR 53
           MADVE DVAA       G PKKRTFKKFSFRGVDLDALLDMSTDELVK+FSARARRRFQR
Sbjct: 1   MADVEVDVAAAAAAAAAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKMFSARARRRFQR 60

Query: 54  GLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEI 113
           GLTRKPMALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEI
Sbjct: 61  GLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEI 120

Query: 114 KPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 151
           KPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 KPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 158


>Glyma17g00820.1 
          Length = 155

 Score =  285 bits (730), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 145/155 (93%), Positives = 146/155 (94%), Gaps = 4/155 (2%)

Query: 1   MADVETDVAAGV----PKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLT 56
           MADVE D AA      PKKRTFKKFSFRGVDLDALLDMSTDELVK+FSARARRRFQRGLT
Sbjct: 1   MADVEVDAAAAAGAAQPKKRTFKKFSFRGVDLDALLDMSTDELVKMFSARARRRFQRGLT 60

Query: 57  RKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPE 116
           RKPMALIKKLRKAKREAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPE
Sbjct: 61  RKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPE 120

Query: 117 MIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 151
           MIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 121 MIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 155


>Glyma08g04690.1 
          Length = 166

 Score =  281 bits (720), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 138/141 (97%), Positives = 140/141 (99%)

Query: 11  GVPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKPMALIKKLRKAK 70
           G+PKKRTFKKFSFRGVDLDALLDMSTDELVK+FSARARRRFQRGLTRKPMALIKKLRKAK
Sbjct: 26  GLPKKRTFKKFSFRGVDLDALLDMSTDELVKMFSARARRRFQRGLTRKPMALIKKLRKAK 85

Query: 71  REAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYK 130
           REAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYK
Sbjct: 86  REAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYK 145

Query: 131 PVKHGRPGIGATHSSRFIPLK 151
           PVKHGRPGIGATHSSRFIPLK
Sbjct: 146 PVKHGRPGIGATHSSRFIPLK 166


>Glyma08g04690.2 
          Length = 155

 Score =  281 bits (720), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 138/141 (97%), Positives = 140/141 (99%)

Query: 11  GVPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKPMALIKKLRKAK 70
           G+PKKRTFKKFSFRGVDLDALLDMSTDELVK+FSARARRRFQRGLTRKPMALIKKLRKAK
Sbjct: 15  GLPKKRTFKKFSFRGVDLDALLDMSTDELVKMFSARARRRFQRGLTRKPMALIKKLRKAK 74

Query: 71  REAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYK 130
           REAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYK
Sbjct: 75  REAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYK 134

Query: 131 PVKHGRPGIGATHSSRFIPLK 151
           PVKHGRPGIGATHSSRFIPLK
Sbjct: 135 PVKHGRPGIGATHSSRFIPLK 155


>Glyma05g35030.1 
          Length = 155

 Score =  280 bits (717), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 138/141 (97%), Positives = 139/141 (98%)

Query: 11  GVPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKPMALIKKLRKAK 70
           G PKKRTFKKFSFRGVDLDALLDMSTDELVK+FSARARRRFQRGLTRKPMALIKKLRKAK
Sbjct: 15  GQPKKRTFKKFSFRGVDLDALLDMSTDELVKMFSARARRRFQRGLTRKPMALIKKLRKAK 74

Query: 71  REAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYK 130
           REAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYK
Sbjct: 75  REAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYK 134

Query: 131 PVKHGRPGIGATHSSRFIPLK 151
           PVKHGRPGIGATHSSRFIPLK
Sbjct: 135 PVKHGRPGIGATHSSRFIPLK 155


>Glyma17g00820.2 
          Length = 118

 Score =  238 bits (606), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 116/118 (98%), Positives = 117/118 (99%)

Query: 34  MSTDELVKLFSARARRRFQRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVP 93
           MSTDELVK+FSARARRRFQRGLTRKPMALIKKLRKAKREAP GEKPEPVRTHLRNMIIVP
Sbjct: 1   MSTDELVKMFSARARRRFQRGLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVP 60

Query: 94  EMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 151
           EMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK
Sbjct: 61  EMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 118


>Glyma13g10060.1 
          Length = 125

 Score =  139 bits (351), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 66/85 (77%), Positives = 71/85 (83%)

Query: 51  FQRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQ 110
           +   LTRKP AL+KKLRK KREAP  EKP+PVRTHL NMIIVPE+  S IGVY+ KTFNQ
Sbjct: 19  YLTCLTRKPRALVKKLRKVKREAPASEKPKPVRTHLCNMIIVPEINDSTIGVYHDKTFNQ 78

Query: 111 VEIKPEMIGHYLAEFSISYKPVKHG 135
           VEIKPEMIGHY  EFSISYKPVKHG
Sbjct: 79  VEIKPEMIGHYFTEFSISYKPVKHG 103


>Glyma17g29350.1 
          Length = 78

 Score =  119 bits (297), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 58/74 (78%), Positives = 63/74 (85%)

Query: 60  MALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIG 119
           M L+KKLRKAKREAP  EKPE VRT+L NMIIVPEM GSI  +Y+GKTFN VEIKPEMIG
Sbjct: 1   MTLVKKLRKAKREAPTSEKPELVRTYLCNMIIVPEMSGSITRIYHGKTFNHVEIKPEMIG 60

Query: 120 HYLAEFSISYKPVK 133
           HYL EF+ISYKP K
Sbjct: 61  HYLIEFTISYKPPK 74


>Glyma16g17180.1 
          Length = 78

 Score = 86.7 bits (213), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 47/86 (54%), Positives = 54/86 (62%), Gaps = 15/86 (17%)

Query: 50  RFQRGLTRKPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFN 109
           R  +G T+    L KKLRK KREA   EKP+P                +I+ VY+GKTFN
Sbjct: 5   RISKGSTKPRSILSKKLRKVKREASASEKPKPC---------------NIMRVYHGKTFN 49

Query: 110 QVEIKPEMIGHYLAEFSISYKPVKHG 135
           QVEIKPEMI HYL EF ISYKP+KHG
Sbjct: 50  QVEIKPEMIRHYLVEFLISYKPIKHG 75


>Glyma12g21100.1 
          Length = 52

 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/51 (66%), Positives = 37/51 (72%)

Query: 58  KPMALIKKLRKAKREAPQGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTF 108
           KPM L+ K  K K EAP GEK EPV TH+RNMIIV EM GSI  +YN KTF
Sbjct: 1   KPMTLVMKFLKEKTEAPTGEKLEPVCTHIRNMIIVSEMSGSITELYNEKTF 51


>Glyma12g18160.1 
          Length = 31

 Score = 51.2 bits (121), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/29 (82%), Positives = 26/29 (89%)

Query: 105 GKTFNQVEIKPEMIGHYLAEFSISYKPVK 133
           GKTFNQVEIK EMI +YL EFSISYKP+K
Sbjct: 3   GKTFNQVEIKLEMIKYYLVEFSISYKPIK 31