Miyakogusa Predicted Gene
- Lj5g3v1015780.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1015780.1 tr|D7LYD9|D7LYD9_ARALL Prenylated rab receptor 2
OS=Arabidopsis lyrata subsp. lyrata
GN=ARALYDRAFT_9,40.27,4e-19,PRA1,Prenylated rab acceptor PRA1;
seg,NULL; PRENYLATED RAB ACCEPTOR 1-RELATED,NULL,CUFF.54673.1
(196 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma10g03790.1 86 2e-17
Glyma02g15970.1 84 7e-17
Glyma03g31620.1 80 1e-15
Glyma19g34450.1 74 7e-14
Glyma10g30530.1 71 6e-13
Glyma20g36850.1 71 6e-13
Glyma13g42730.1 65 3e-11
Glyma15g02700.1 65 4e-11
Glyma07g19240.1 52 6e-07
Glyma18g43790.1 52 6e-07
Glyma14g06010.1 51 9e-07
Glyma01g31600.1 50 1e-06
Glyma03g05630.1 50 1e-06
Glyma02g42890.1 50 2e-06
Glyma20g15710.1 50 2e-06
>Glyma10g03790.1
Length = 155
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 53/67 (79%)
Query: 23 RATNASNFPTRRPWEEFFTLHSLTRPYSLGEASLRVKHNLRHFLGNYTMVLLFILFVSLI 82
RA S F TRRPWEEFF LHS TRPY+LGEASLRVK NL HF NY M +L ++F+SL+
Sbjct: 13 RAIAPSGFATRRPWEEFFALHSFTRPYTLGEASLRVKRNLGHFRVNYAMAVLLVVFLSLL 72
Query: 83 WHPVSII 89
WHP+S+I
Sbjct: 73 WHPISLI 79
>Glyma02g15970.1
Length = 177
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 73/168 (43%)
Query: 23 RATNASNFPTRRPWEEFFTLHSLTRPYSLGEASLRVKHNLRHFLGNYTMVLLFILFVSLI 82
RAT S F TRRPWEEFF LHS TRPY+LGE +LRVK NL HF NY MV+L +F+SL+
Sbjct: 8 RATAPSAFATRRPWEEFFALHSFTRPYTLGETTLRVKRNLGHFRVNYAMVVLLFVFLSLL 67
Query: 83 WHPVSIIXXXXXXXXXXXXXXXXXXXXXXXSRTVDYRFIXXXXXXXXXXXXXXXXXXXXX 142
W P+S++ R +D R +
Sbjct: 68 WFPISLVVFLAVFAAWFFLYFFRDGPIVVLRRELDDRLVLAALSAVTVAGLVLTGVWLNV 127
Query: 143 XXXXXXXXXXXXXXXXFRSTEDLYVDEXXXXXXXXXXXXXXXPTKRTG 190
R+TEDLYVDE PTKRTG
Sbjct: 128 VVALLFAAAAVALHAALRNTEDLYVDELEVSDGGLVSVVGGSPTKRTG 175
>Glyma03g31620.1
Length = 201
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 68/145 (46%)
Query: 25 TNASNFPTRRPWEEFFTLHSLTRPYSLGEASLRVKHNLRHFLGNYTMVLLFILFVSLIWH 84
T S+F TRRPWEE F L S TRPYS+GEA++RV+ NL HF NY M++LF+LF+SL+WH
Sbjct: 34 TTRSSFATRRPWEEVFALFSFTRPYSIGEATMRVRRNLDHFRVNYFMIVLFVLFLSLLWH 93
Query: 85 PVSIIXXXXXXXXXXXXXXXXXXXXXXXSRTVDYRFIXXXXXXXXXXXXXXXXXXXXXXX 144
PVSII VD R +
Sbjct: 94 PVSIIVYLVALVVWFFLYFFRDEPLVVLGTAVDDRAVATVLAAATVVGLVLTGVWVNVVG 153
Query: 145 XXXXXXXXXXXXXXFRSTEDLYVDE 169
FRSTEDLYVDE
Sbjct: 154 SVIIGIVLVVLHASFRSTEDLYVDE 178
>Glyma19g34450.1
Length = 200
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 53/62 (85%)
Query: 28 SNFPTRRPWEEFFTLHSLTRPYSLGEASLRVKHNLRHFLGNYTMVLLFILFVSLIWHPVS 87
S+F TRRPWEE F L+S TRPYS+GEA++RV+ NL +F NY M++LF+LF+SL+WHPVS
Sbjct: 36 SSFATRRPWEEVFALYSFTRPYSIGEATMRVRRNLDNFRVNYFMMVLFVLFLSLLWHPVS 95
Query: 88 II 89
II
Sbjct: 96 II 97
>Glyma10g30530.1
Length = 190
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 58/138 (42%)
Query: 32 TRRPWEEFFTLHSLTRPYSLGEASLRVKHNLRHFLGNYTMVLLFILFVSLIWHPVSIIXX 91
T RPW EF L +L+ PYS +A +RV+ NL HF NY + L I+F+SL+WHPVS+I
Sbjct: 33 TPRPWREFLDLSALSCPYSYDDAMIRVRRNLSHFRFNYAAITLLIVFLSLLWHPVSMIVF 92
Query: 92 XXXXXXXXXXXXXXXXXXXXXSRTVDYRFIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 151
++T+D R +
Sbjct: 93 LLVLVAWYYLYFSRDGLLVVFNQTLDDRTVLCVLGLLTVAALVSTHVGLNVLLSLIVAVV 152
Query: 152 XXXXXXXFRSTEDLYVDE 169
FR TEDL++DE
Sbjct: 153 LVGLHAAFRVTEDLFLDE 170
>Glyma20g36850.1
Length = 192
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 62/143 (43%)
Query: 27 ASNFPTRRPWEEFFTLHSLTRPYSLGEASLRVKHNLRHFLGNYTMVLLFILFVSLIWHPV 86
A++ T RPW EF L +L+RPYS +A +RV+ NL +F NY V L I+F+SL+WHP+
Sbjct: 30 ATSSVTPRPWREFLDLSALSRPYSYDDAMIRVRRNLSYFRFNYAAVTLLIVFLSLLWHPI 89
Query: 87 SIIXXXXXXXXXXXXXXXXXXXXXXXSRTVDYRFIXXXXXXXXXXXXXXXXXXXXXXXXX 146
S+I ++T+D R +
Sbjct: 90 SMIVFLLVLVAWYYFYFSRDVPLVVFNQTLDDRTVLCVLGLLTVVSLVSTHVGLNVLLSL 149
Query: 147 XXXXXXXXXXXXFRSTEDLYVDE 169
FR TEDL++DE
Sbjct: 150 IVSVVLVGLHAAFRVTEDLFLDE 172
>Glyma13g42730.1
Length = 184
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%)
Query: 32 TRRPWEEFFTLHSLTRPYSLGEASLRVKHNLRHFLGNYTMVLLFILFVSLIWHPVSII 89
TRRPW+ F S P +G+A RV+ N+ +F NY +V+L +LF+SL+WHP+S+I
Sbjct: 33 TRRPWKLMFNFRSFGLPAGVGDAVARVRENISYFQMNYAIVVLIVLFLSLLWHPISLI 90
>Glyma15g02700.1
Length = 184
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%)
Query: 32 TRRPWEEFFTLHSLTRPYSLGEASLRVKHNLRHFLGNYTMVLLFILFVSLIWHPVSII 89
TRRPW+ F S P +G+A RV+ N+ +F NY +V+L +LF+SL+WHP+S+I
Sbjct: 33 TRRPWKLMFNFRSFALPAGVGDAVSRVRENISYFQMNYAIVVLIVLFLSLLWHPISLI 90
>Glyma07g19240.1
Length = 223
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 33 RRPWEEFFTLHSLTRPYSLGEASLRVKHNLRHFLGNYTMVLLFILFVSLIWHP 85
RRPW E ++++P S EA++R++HN+ +F NY +V+ IL VSL+ P
Sbjct: 54 RRPWPEVLDRSAISKPLSFSEATVRIRHNISYFRINYYIVVTLILAVSLLTSP 106
>Glyma18g43790.1
Length = 197
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 33 RRPWEEFFTLHSLTRPYSLGEASLRVKHNLRHFLGNYTMVLLFILFVSLIWHPVS 87
RRPW E ++++P S EA+LR++HN+ +F NY +V+ IL VSL+ P S
Sbjct: 41 RRPWPELLDHTAMSKPLSFSEATLRIRHNISYFRINYYIVVSLILAVSLLTSPFS 95
>Glyma14g06010.1
Length = 277
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 30 FPTRRPWEEFFTLHSLTRPYSLGEASLRVKHNLRHFLGNYTMVLLFILFVSLIWHPVSI 88
F RRPW E S++RP +L EA R++ N +F NY +++ L VSLI HP S+
Sbjct: 109 FAQRRPWTELIDRSSMSRPDTLAEAYSRIRKNFAYFRVNYLTLIVLALAVSLISHPFSL 167
>Glyma01g31600.1
Length = 219
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 33 RRPWEEFFTLHSLTRPYSLGEASLRVKHNLRHFLGNYTMVLLFILFVSLIWHPVSII 89
RRPW E + ++P S EA+LRV+ N +F NY V+ IL VSL+ +P S+I
Sbjct: 51 RRPWSELGDRSAFSKPESFSEATLRVRKNFSYFRVNYYAVVSLILAVSLLTNPFSLI 107
>Glyma03g05630.1
Length = 227
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 33 RRPWEEFFTLHSLTRPYSLGEASLRVKHNLRHFLGNYTMVLLFILFVSLIWHPVSII 89
RRPW E + ++P S EA+LRV+ N +F NY V+ IL VSL+ +P S+I
Sbjct: 55 RRPWSELADRSAFSKPESFSEATLRVRKNFSYFRVNYYAVVSLILAVSLLTNPFSLI 111
>Glyma02g42890.1
Length = 215
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 30 FPTRRPWEEFFTLHSLTRPYSLGEASLRVKHNLRHFLGNYTMVLLFILFVSLIWHPVSI 88
F RRPW E S++RP +L EA R++ N +F NY ++ L VSLI HP S+
Sbjct: 47 FAQRRPWAELIDRSSMSRPDTLAEAYSRIRKNFGYFRVNYLTLIALALAVSLITHPFSL 105
>Glyma20g15710.1
Length = 77
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 24 ATNASNFPTRRPWEEFFTLHSLTRPYSLGEASLRVKHNLRHFLGNYTMVLLFILFVSLI 82
T ++ T RPW EF +L+ PY +A +RV+ NL HF NY V L I+F+SL+
Sbjct: 19 GTTTTSSVTPRPWHEFLYRSALSYPYFYDDAMIRVQRNLSHFCFNYASVTLNIVFLSLV 77