Miyakogusa Predicted Gene

Lj5g3v1015150.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1015150.1 Non Chatacterized Hit- tr|I1GQB1|I1GQB1_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,31.34,2e-18,no
description,Nucleic acid-binding, OB-fold; SSB,Primosome
PriB/single-strand DNA-binding; SINGLE-S,gene.g60977.t1.1
         (375 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g16100.1                                                       414   e-116
Glyma02g16100.2                                                       411   e-115
Glyma10g03700.1                                                       399   e-111
Glyma10g03700.3                                                       300   2e-81
Glyma10g03700.2                                                       216   4e-56
Glyma14g08720.1                                                       122   7e-28
Glyma07g15570.1                                                        97   3e-20
Glyma14g08760.1                                                        93   4e-19
Glyma17g36390.1                                                        74   2e-13
Glyma05g14790.1                                                        55   1e-07
Glyma14g21430.1                                                        54   2e-07

>Glyma02g16100.1 
          Length = 284

 Score =  414 bits (1064), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 206/291 (70%), Positives = 234/291 (80%), Gaps = 11/291 (3%)

Query: 87  MAIEQALSSSTTTTFRNLLTFPKTPISKPKFQFPCSPSHSNLKLKLKFKCSSMSTNASYP 146
           MA+EQA+SSS++T  RN+LTFPKT ISKP+FQ   SPS    +     KCS M+T  SYP
Sbjct: 1   MALEQAVSSSSST-LRNVLTFPKTLISKPQFQVAASPSWKTQRRWGNLKCS-MTTTPSYP 58

Query: 147 KPSEIPWQKELCNSVSLIGTVGAPVEIKHFPSGKVASWTRLAVKKNATQTSWVNLTFWDE 206
           KPSEIPWQKELCNSV+LIG V APVEIKH PSGKV +WTRL VKK+ATQ+S ++LTFWD+
Sbjct: 59  KPSEIPWQKELCNSVNLIGNVAAPVEIKHLPSGKVVAWTRLCVKKSATQSSSISLTFWDD 118

Query: 207 LAHVAFQHVQKGHQIHVSGRLVADTVETDEGKQQTYYKVVAQELNFIDRSFSQV-NSQDQ 265
           LAHVA QH+QKG+QIHVSGRL+ DTVET+EGK QTYYKVVAQ+LNFI+R+FS   +SQ Q
Sbjct: 119 LAHVASQHLQKGYQIHVSGRLIIDTVETEEGKTQTYYKVVAQQLNFIERNFSSASSSQGQ 178

Query: 266 DSDFMMSGNGKSYMFSRKAGYAANSTGSVMELWQAFFANPGEWWDNRNKKRNPKAPDFKH 325
           + DF M+G G      RK   A NSTGSV+E W AFFANPGEWWDNRN KRNPKAPDFKH
Sbjct: 179 EFDFAMAGGG------RKVSNAVNSTGSVVESWNAFFANPGEWWDNRNNKRNPKAPDFKH 232

Query: 326 KDTGEALWIEGRSTPSWVNSQLEIMDSRMGSFTGQ--RMPVDMVTTDEIFS 374
           KDTGEALWIEGR +P WV SQLEI+DSRMGSF GQ  RMPV MV  DEI S
Sbjct: 233 KDTGEALWIEGRYSPPWVKSQLEILDSRMGSFAGQNARMPVGMVAADEIVS 283


>Glyma02g16100.2 
          Length = 283

 Score =  411 bits (1057), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 205/291 (70%), Positives = 233/291 (80%), Gaps = 12/291 (4%)

Query: 87  MAIEQALSSSTTTTFRNLLTFPKTPISKPKFQFPCSPSHSNLKLKLKFKCSSMSTNASYP 146
           MA+EQA+SSS++T  RN+LTFPKT ISKP+FQ   SPS    +     KCS M+T  SYP
Sbjct: 1   MALEQAVSSSSST-LRNVLTFPKTLISKPQFQVAASPSWKTQRRWGNLKCS-MTTTPSYP 58

Query: 147 KPSEIPWQKELCNSVSLIGTVGAPVEIKHFPSGKVASWTRLAVKKNATQTSWVNLTFWDE 206
           KPSEIPWQKELCNSV+LIG V APVEIKH PSGKV +WTRL VKK+ATQ+S ++LTFWD+
Sbjct: 59  KPSEIPWQKELCNSVNLIGNVAAPVEIKHLPSGKVVAWTRLCVKKSATQSSSISLTFWDD 118

Query: 207 LAHVAFQHVQKGHQIHVSGRLVADTVETDEGKQQTYYKVVAQELNFIDRSFSQV-NSQDQ 265
           LAHVA QH+QKG+QIHVSGRL+ DTVET+EGK QTYYKVVAQ+LNFI+R+FS   +SQ Q
Sbjct: 119 LAHVASQHLQKGYQIHVSGRLIIDTVETEEGKTQTYYKVVAQQLNFIERNFSSASSSQGQ 178

Query: 266 DSDFMMSGNGKSYMFSRKAGYAANSTGSVMELWQAFFANPGEWWDNRNKKRNPKAPDFKH 325
           + DF M+G        RK   A NSTGSV+E W AFFANPGEWWDNRN KRNPKAPDFKH
Sbjct: 179 EFDFAMAGG-------RKVSNAVNSTGSVVESWNAFFANPGEWWDNRNNKRNPKAPDFKH 231

Query: 326 KDTGEALWIEGRSTPSWVNSQLEIMDSRMGSFTGQ--RMPVDMVTTDEIFS 374
           KDTGEALWIEGR +P WV SQLEI+DSRMGSF GQ  RMPV MV  DEI S
Sbjct: 232 KDTGEALWIEGRYSPPWVKSQLEILDSRMGSFAGQNARMPVGMVAADEIVS 282


>Glyma10g03700.1 
          Length = 292

 Score =  399 bits (1024), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 203/299 (67%), Positives = 232/299 (77%), Gaps = 19/299 (6%)

Query: 87  MAIEQALSSSTTTTFRNLLTFPKTPISKPKFQFPCSPS--------HSNLKLKLKFKCSS 138
           M +EQA+SSS+T   RN+ T PKT ISKP+FQ   SPS           L + LK   ++
Sbjct: 1   MVLEQAVSSSST--LRNVFTNPKTLISKPQFQVAASPSWKPQQPRWEGWLGINLKCSMTT 58

Query: 139 MSTNASYPKPSEIPWQKELCNSVSLIGTVGAPVEIKHFPSGKVASWTRLAVKKNATQTSW 198
            +T +SYPKPSEIPWQKELCNSV+LIG V APVEIK+ PSGKV +WTRL VKK+ATQ+S 
Sbjct: 59  TTTPSSYPKPSEIPWQKELCNSVNLIGNVAAPVEIKYLPSGKVVAWTRLYVKKSATQSSP 118

Query: 199 VNLTFWDELAHVAFQHVQKGHQIHVSGRLVADTVETDEGKQQTYYKVVAQELNFIDRSFS 258
           +NLTFWD+LAHVA QH+QKGHQIHVSGRL+ DTVET+EGK QTYYKVV Q+LNFI+R+FS
Sbjct: 119 INLTFWDDLAHVASQHLQKGHQIHVSGRLITDTVETEEGKSQTYYKVVVQQLNFIERNFS 178

Query: 259 QV-NSQDQDSDFMMSGNGKSYMFSRKAGYAANSTGSVMELWQAFFANPGEWWDNRNKKRN 317
            V +SQ Q+ DF M+G+G      RK   AANSTGSV+E W AFFANPGEWWDNRN KRN
Sbjct: 179 SVSSSQGQEFDFAMAGSG------RKVSNAANSTGSVVETWNAFFANPGEWWDNRNNKRN 232

Query: 318 PKAPDFKHKDTGEALWIEGRSTPSWVNSQLEIMDSRMGSFTGQ--RMPVDMVTTDEIFS 374
           PKAPDFKHKDTGEALWIEGR  P WV SQLEI+DSRMGSF  Q  RMPV MV  DEI S
Sbjct: 233 PKAPDFKHKDTGEALWIEGRYNPPWVKSQLEILDSRMGSFASQNARMPVGMVAADEIVS 291


>Glyma10g03700.3 
          Length = 239

 Score =  300 bits (767), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 155/238 (65%), Positives = 183/238 (76%), Gaps = 17/238 (7%)

Query: 87  MAIEQALSSSTTTTFRNLLTFPKTPISKPKFQFPCSPS--------HSNLKLKLKFKCSS 138
           M +EQA+SSS+T   RN+ T PKT ISKP+FQ   SPS           L + LK   ++
Sbjct: 1   MVLEQAVSSSST--LRNVFTNPKTLISKPQFQVAASPSWKPQQPRWEGWLGINLKCSMTT 58

Query: 139 MSTNASYPKPSEIPWQKELCNSVSLIGTVGAPVEIKHFPSGKVASWTRLAVKKNATQTSW 198
            +T +SYPKPSEIPWQKELCNSV+LIG V APVEIK+ PSGKV +WTRL VKK+ATQ+S 
Sbjct: 59  TTTPSSYPKPSEIPWQKELCNSVNLIGNVAAPVEIKYLPSGKVVAWTRLYVKKSATQSSP 118

Query: 199 VNLTFWDELAHVAFQHVQKGHQIHVSGRLVADTVETDEGKQQTYYKVVAQELNFIDRSFS 258
           +NLTFWD+LAHVA QH+QKGHQIHVSGRL+ DTVET+EGK QTYYKVV Q+LNFI+R+FS
Sbjct: 119 INLTFWDDLAHVASQHLQKGHQIHVSGRLITDTVETEEGKSQTYYKVVVQQLNFIERNFS 178

Query: 259 QV-NSQDQDSDFMMSGNGKSYMFSRKAGYAANSTGSVMELWQAFFANPGEWWDNRNKK 315
            V +SQ Q+ DF M+G+G      RK   AANSTGSV+E W AFFANPGEWWDNRN K
Sbjct: 179 SVSSSQGQEFDFAMAGSG------RKVSNAANSTGSVVETWNAFFANPGEWWDNRNNK 230


>Glyma10g03700.2 
          Length = 173

 Score =  216 bits (549), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 112/175 (64%), Positives = 133/175 (76%), Gaps = 10/175 (5%)

Query: 87  MAIEQALSSSTTTTFRNLLTFPKTPISKPKFQFPCSPSHSNLK------LKLKFKCSSMS 140
           M +EQA+SSS+T   RN+ T PKT ISKP+FQ   SPS    +      L +  KCS  +
Sbjct: 1   MVLEQAVSSSST--LRNVFTNPKTLISKPQFQVAASPSWKPQQPRWEGWLGINLKCSMTT 58

Query: 141 TN--ASYPKPSEIPWQKELCNSVSLIGTVGAPVEIKHFPSGKVASWTRLAVKKNATQTSW 198
           T   +SYPKPSEIPWQKELCNSV+LIG V APVEIK+ PSGKV +WTRL VKK+ATQ+S 
Sbjct: 59  TTTPSSYPKPSEIPWQKELCNSVNLIGNVAAPVEIKYLPSGKVVAWTRLYVKKSATQSSP 118

Query: 199 VNLTFWDELAHVAFQHVQKGHQIHVSGRLVADTVETDEGKQQTYYKVVAQELNFI 253
           +NLTFWD+LAHVA QH+QKGHQIHVSGRL+ DTVET+EGK QTYYKV     N++
Sbjct: 119 INLTFWDDLAHVASQHLQKGHQIHVSGRLITDTVETEEGKSQTYYKVFVTAANWL 173


>Glyma14g08720.1 
          Length = 245

 Score =  122 bits (306), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/250 (34%), Positives = 124/250 (49%), Gaps = 19/250 (7%)

Query: 136 CSSMSTNA-SYPKPSEIPWQKELCNSVSLIGTVGAPVEIKHFPSGKVASWTRLAV-KKNA 193
           CS++  +   + +P  I W   L N+ S IGTV       +  +GK   +T L V K N 
Sbjct: 1   CSAVYQHVLKFQRPPTIRWSPHLENTASFIGTVAREPTRVNSTTGKFGVYTVLKVPKSNQ 60

Query: 194 TQTSWVNLTFW--DELAHVAFQHVQKGHQIHVSGRLVADTVETDEGKQQTYYKVVAQELN 251
           + +S+  L     + +A +A +H++    IHV G L + T     G  +  YK+  +E  
Sbjct: 61  SNSSFFRLLLMMRNNVAKLASEHLKSNDLIHVLGSLGSFTKPDANGILRLNYKLEVKEFE 120

Query: 252 FIDRSFSQVNSQDQDSD---------FMMSGNGKSYMFSRKAGYAANSTGSVMELWQAFF 302
           F+ +S   +  +  +S          F++    +  M    AG   N   + + LWQ FF
Sbjct: 121 FVAQSSGYLGDKKLESVEGMFCWLLFFILFFYRQ--MLVSDAGMHKNQ--NRLHLWQVFF 176

Query: 303 ANPGEWWDNRNKKRNPKAPDFKHKDTGEALWIEGRSTPSWVNSQLEIMDSRM-GSFTGQR 361
           +NP EWWD R  KRNPK PDFKHKDTGEALW+     P WV  QL++ DS++ G   G+R
Sbjct: 177 SNPNEWWDQRKSKRNPKQPDFKHKDTGEALWLS-EYDPPWVKRQLQLFDSKIAGGSAGRR 235

Query: 362 MPVDMVTTDE 371
             V     DE
Sbjct: 236 SRVTNWVYDE 245


>Glyma07g15570.1 
          Length = 309

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 119/270 (44%), Gaps = 72/270 (26%)

Query: 147 KPSEIPWQKELCNSVSLIGTVGAPVEIKHFPSGKVASWTRLAVKKNATQTSW-VNLTFWD 205
           KP++IP+Q +L NSV+LIG V +P++    P+      + +  +++++  S+ + + F  
Sbjct: 25  KPNDIPFQPKLANSVNLIGHVQSPIQFHVSPNDGYVWASTVITRQDSSDLSFSIPVIFEG 84

Query: 206 ELAHVAFQHVQKGHQIHVSGRLVADTVETDEGKQQTYYKVVAQELNFIDRSFSQVNS--- 262
           +LAH A  H+     IH++G+L  D+ + +    Q+  +V+ Q LNF+ R + Q N+   
Sbjct: 85  DLAHTAKFHLNLNDCIHIAGKLTTDSPQLEHLHPQSNIQVMVQTLNFVQR-YPQPNTTTS 143

Query: 263 -------------------QDQDS-----------------DFMMSG-NG----KSYMFS 281
                              ++ DS                 DF  S  NG    K   F 
Sbjct: 144 IDLKPQPQPQPEHSIPSAKKNPDSSSPSPWRDLLDNPMQWRDFRESKRNGLVKPKHPDFK 203

Query: 282 RKAGY------------------------AANSTGSVMELWQAFFANPGEWWDNRNKKRN 317
           RK GY                        A +  G   E W     N   WWDNR  KRN
Sbjct: 204 RKDGYSLWLGKDEKWVLPKLEELQFDVPTAISKKGDGGESWNDLVQNYANWWDNRLNKRN 263

Query: 318 PKAPDFKHKDTGEALWIEGRSTPSWVNSQL 347
            KAPDFKHK+TG+ LW++  S   WV  +L
Sbjct: 264 AKAPDFKHKETGKGLWLDSSS--EWVLEKL 291


>Glyma14g08760.1 
          Length = 133

 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 56/95 (58%), Gaps = 2/95 (2%)

Query: 278 YMFSRKAGYAANSTGSVMELWQAFFANPGEWWDNRNKKRNPKAPDFKHKDTGEALWIEGR 337
           Y F  K+        + + LWQ FF+NP EWWD R  KRNPK PDFKHKDTGEALW+   
Sbjct: 40  YFFIGKSDAGMQKNQNRLHLWQVFFSNPNEWWDQRKSKRNPKQPDFKHKDTGEALWL-SE 98

Query: 338 STPSWVNSQLEIMDSRM-GSFTGQRMPVDMVTTDE 371
             P WV  QL++ DS++ G   G+R  V     DE
Sbjct: 99  YDPPWVKRQLQLFDSKIAGGSAGRRSRVTNWVYDE 133


>Glyma17g36390.1 
          Length = 76

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 32/56 (57%), Positives = 39/56 (69%), Gaps = 1/56 (1%)

Query: 301 FFANPGEWWDNRNKKRNPKAPDFKHKDTGEALWIEGRSTPSWVNSQLEIMDSRMGS 356
           F +NP EWWD R +KRNPK PDFKHKDTGEA W+     P WV  QL++ DS++  
Sbjct: 12  FSSNPNEWWDQRKRKRNPKQPDFKHKDTGEAQWLR-EYDPPWVKKQLQLFDSKIAG 66


>Glyma05g14790.1 
          Length = 274

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/44 (56%), Positives = 31/44 (70%), Gaps = 2/44 (4%)

Query: 304 NPGEWWDNRNKKRNPKAPDFKHKDTGEALWIEGRSTPSWVNSQL 347
           N   WWDNR  KRN KAPDFKHK+TG+ LW++  S+  WV  +L
Sbjct: 215 NYANWWDNRLNKRNAKAPDFKHKETGKGLWLD--SSSEWVLEKL 256


>Glyma14g21430.1 
          Length = 180

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/44 (54%), Positives = 30/44 (68%), Gaps = 2/44 (4%)

Query: 304 NPGEWWDNRNKKRNPKAPDFKHKDTGEALWIEGRSTPSWVNSQL 347
           N   WWDNR  KRN KAPDFKHK+T + LW++  S+  WV  +L
Sbjct: 121 NYANWWDNRLNKRNAKAPDFKHKETSKGLWLD--SSSKWVLEKL 162