Miyakogusa Predicted Gene
- Lj5g3v1015100.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1015100.1 Non Chatacterized Hit- tr|C0P3H9|C0P3H9_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,41.1,1e-17,coiled-coil,NULL,
NODE_64740_length_942_cov_22.079618.path2.1
(223 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma10g03680.2 351 3e-97
Glyma10g03680.1 351 3e-97
Glyma02g16120.1 210 1e-54
>Glyma10g03680.2
Length = 224
Score = 351 bits (901), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 180/227 (79%), Positives = 200/227 (88%), Gaps = 7/227 (3%)
Query: 1 MLGFSYGEIFLLLGATAAVIGPKDLPMISRTAGRLAGRAIGYVQLARGQFDNVMQQSQAR 60
MLGFSYGEIFLLLGATAA+IGPKDLP+I RTAGRLAGRAIGYVQLARGQFD VMQQSQAR
Sbjct: 1 MLGFSYGEIFLLLGATAALIGPKDLPIICRTAGRLAGRAIGYVQLARGQFDTVMQQSQAR 60
Query: 61 QVHKELQDTMAQLDAIRHEIRSISFMNPAP-AQRVVDNPDQTPISNANTDCTKPEDTGVK 119
QVHKELQDTMAQLDAIRHEIRSIS +NP P +R+VD+PDQT ISN + KPE++G +
Sbjct: 61 QVHKELQDTMAQLDAIRHEIRSISIINPGPLTRRLVDDPDQTSISN---ESRKPEESGQE 117
Query: 120 N-PIPSVIKDSTSMPSNSCNMQSQATTYARLAESPAIKDGLLASSTGVEK--DEQQLLVL 176
N IP+V+KDSTSM SNSC+MQ+QAT Y+RL SPAIK+ L ASST VEK D+ QL VL
Sbjct: 118 NSSIPTVMKDSTSMSSNSCHMQNQATIYSRLVNSPAIKNELSASSTEVEKIEDKLQLTVL 177
Query: 177 PISAESSGLLPNRGADVKGSDIVLEAILEAEVAHNAKEFFSQPQNQI 223
PISAE++GLLP RGADVKGSDIVLEAI+EAEVAHNAKEFFSQPQNQI
Sbjct: 178 PISAENAGLLPIRGADVKGSDIVLEAIVEAEVAHNAKEFFSQPQNQI 224
>Glyma10g03680.1
Length = 224
Score = 351 bits (901), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 180/227 (79%), Positives = 200/227 (88%), Gaps = 7/227 (3%)
Query: 1 MLGFSYGEIFLLLGATAAVIGPKDLPMISRTAGRLAGRAIGYVQLARGQFDNVMQQSQAR 60
MLGFSYGEIFLLLGATAA+IGPKDLP+I RTAGRLAGRAIGYVQLARGQFD VMQQSQAR
Sbjct: 1 MLGFSYGEIFLLLGATAALIGPKDLPIICRTAGRLAGRAIGYVQLARGQFDTVMQQSQAR 60
Query: 61 QVHKELQDTMAQLDAIRHEIRSISFMNPAP-AQRVVDNPDQTPISNANTDCTKPEDTGVK 119
QVHKELQDTMAQLDAIRHEIRSIS +NP P +R+VD+PDQT ISN + KPE++G +
Sbjct: 61 QVHKELQDTMAQLDAIRHEIRSISIINPGPLTRRLVDDPDQTSISN---ESRKPEESGQE 117
Query: 120 N-PIPSVIKDSTSMPSNSCNMQSQATTYARLAESPAIKDGLLASSTGVEK--DEQQLLVL 176
N IP+V+KDSTSM SNSC+MQ+QAT Y+RL SPAIK+ L ASST VEK D+ QL VL
Sbjct: 118 NSSIPTVMKDSTSMSSNSCHMQNQATIYSRLVNSPAIKNELSASSTEVEKIEDKLQLTVL 177
Query: 177 PISAESSGLLPNRGADVKGSDIVLEAILEAEVAHNAKEFFSQPQNQI 223
PISAE++GLLP RGADVKGSDIVLEAI+EAEVAHNAKEFFSQPQNQI
Sbjct: 178 PISAENAGLLPIRGADVKGSDIVLEAIVEAEVAHNAKEFFSQPQNQI 224
>Glyma02g16120.1
Length = 140
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/148 (71%), Positives = 119/148 (80%), Gaps = 9/148 (6%)
Query: 1 MLGFSYGEIFLLLGATAAVIGPKDLPMISRTAGRLAGRAIGYVQLARGQFDNVMQQSQAR 60
MLGFSYGEIFL LGATAA+IGPKDLP+I RTAGRLAGRAIG VQLARGQFD VMQQSQAR
Sbjct: 1 MLGFSYGEIFLSLGATAALIGPKDLPIICRTAGRLAGRAIGCVQLARGQFDTVMQQSQAR 60
Query: 61 QVHKELQDTMAQLDAIRHEIRSISFMNPAP-AQRVVDNPDQTPISNANTDCTKPEDTGVK 119
+VHKELQDTMAQLDAI HEIRS+S +N P +R+VDNPDQT IS+A +
Sbjct: 61 RVHKELQDTMAQLDAIHHEIRSVSIINAGPLTRRLVDNPDQTSISDAIIY--------MI 112
Query: 120 NPIPSVIKDSTSMPSNSCNMQSQATTYA 147
+ +++DSTSM SNSCNMQSQAT YA
Sbjct: 113 YAVLQLLRDSTSMSSNSCNMQSQATIYA 140