Miyakogusa Predicted Gene

Lj5g3v1014550.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1014550.1 Non Chatacterized Hit- tr|B6T4D5|B6T4D5_MAIZE
Putative uncharacterized protein OS=Zea mays PE=4
SV=1,58.02,5e-19,Ribosomal_S21,Ribosomal protein S21,CUFF.54611.1
         (112 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma18g48440.1                                                       178   1e-45
Glyma09g37950.1                                                       178   1e-45

>Glyma18g48440.1 
          Length = 112

 Score =  178 bits (452), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 88/112 (78%), Positives = 99/112 (88%)

Query: 1   MNSIAKRLSSLFGKSACATEPLNSGRHQLQQLQQCRGIRVRVFNGNLESALALMQRKMTS 60
           MNS+A+RLSSL   S    EP N+G HQ+QQLQQCRGIRV+V  GNLE+AL LMQRKM S
Sbjct: 1   MNSVARRLSSLVRHSGFTPEPFNNGHHQMQQLQQCRGIRVKVMGGNLEAALGLMQRKMQS 60

Query: 61  SGIERMIKKEQRFHIKNSEKRVLARKNLERRLRSEDLARKLKAIMIKKVRGL 112
           SGIERMIK+EQRFHIKNSEKRVLA+KNLER++RSEDLA+KLKAIMIKKVRGL
Sbjct: 61  SGIERMIKQEQRFHIKNSEKRVLAQKNLERKIRSEDLAKKLKAIMIKKVRGL 112


>Glyma09g37950.1 
          Length = 112

 Score =  178 bits (451), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 88/112 (78%), Positives = 99/112 (88%)

Query: 1   MNSIAKRLSSLFGKSACATEPLNSGRHQLQQLQQCRGIRVRVFNGNLESALALMQRKMTS 60
           MNS+A+RLS LF  S    EP N+G HQ+Q+LQQCRGIRV+V  GNLE+AL LMQRKM S
Sbjct: 1   MNSVARRLSRLFRHSGFTPEPFNNGHHQMQKLQQCRGIRVKVIGGNLEAALGLMQRKMQS 60

Query: 61  SGIERMIKKEQRFHIKNSEKRVLARKNLERRLRSEDLARKLKAIMIKKVRGL 112
           SGIERMIK+EQRFHIKNSEKRVLA+KNLER++RSEDLARKLKAIMIKKVRGL
Sbjct: 61  SGIERMIKQEQRFHIKNSEKRVLAQKNLERKIRSEDLARKLKAIMIKKVRGL 112