Miyakogusa Predicted Gene

Lj5g3v1003310.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v1003310.1 Non Chatacterized Hit- tr|I0YU46|I0YU46_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,44.12,5e-18,seg,NULL,CUFF.54508.1
         (164 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g16410.1                                                       194   3e-50
Glyma10g03430.2                                                       187   3e-48
Glyma10g03430.1                                                       187   3e-48
Glyma02g16410.2                                                       186   7e-48

>Glyma02g16410.1 
          Length = 163

 Score =  194 bits (494), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 108/167 (64%), Positives = 123/167 (73%), Gaps = 7/167 (4%)

Query: 1   MKRTMPWVXXXXXXXXXXXXXXXXXXXXTGGKKPQGKSQK---EKGAVIDFDALKRYGYK 57
           MKRTMPW                     TGG+  +GKS+K   EK  VIDF+ALKR+GY+
Sbjct: 1   MKRTMPWSDDDESSSSHSDSERDSE---TGGENSKGKSRKQKTEKSGVIDFEALKRHGYR 57

Query: 58  GGPSVLKVPAPKEXXXXXXXXXXTGKEKRVDNKGIEESYEERQKTREALSQGEQLQTVLT 117
           GGPSVLKVPAPKE          TGKEKRVD K IEESYEER+KTREA+S GE+L   LT
Sbjct: 58  GGPSVLKVPAPKEDDSKQDWSWSTGKEKRVD-KEIEESYEERKKTREAISLGEELPAALT 116

Query: 118 RSEKKNLSFSQKEKRKRELGQASRGKNYVEEEKRLLRDSGVYSGFDA 164
           R++KKN+SFSQKEKRKRELGQASRGKNYVEEEKRLLR++G+YSGFDA
Sbjct: 117 RNDKKNISFSQKEKRKRELGQASRGKNYVEEEKRLLRENGIYSGFDA 163


>Glyma10g03430.2 
          Length = 163

 Score =  187 bits (476), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 105/167 (62%), Positives = 120/167 (71%), Gaps = 7/167 (4%)

Query: 1   MKRTMPWVXXXXXXXXXXXXXXXXXXXXTGGKKPQGKSQKE---KGAVIDFDALKRYGYK 57
           MKRTMPW                     TGG   +GKS+K+   K  +IDF+ALKR+GY+
Sbjct: 1   MKRTMPWSDDDESSSSHSDSECDSE---TGGGNSKGKSRKQTTKKSGLIDFEALKRHGYR 57

Query: 58  GGPSVLKVPAPKEXXXXXXXXXXTGKEKRVDNKGIEESYEERQKTREALSQGEQLQTVLT 117
           GGPSVLKVPAPKE          TGKEK VD K IEESYEER+KTREA+S GE+L   LT
Sbjct: 58  GGPSVLKVPAPKEDDSKKNWSWSTGKEKHVD-KEIEESYEERKKTREAISLGEELPAALT 116

Query: 118 RSEKKNLSFSQKEKRKRELGQASRGKNYVEEEKRLLRDSGVYSGFDA 164
            ++KKNLSFSQKEKRKRELGQASRGKNYVEEEKRLLR++G+YSGFDA
Sbjct: 117 WNDKKNLSFSQKEKRKRELGQASRGKNYVEEEKRLLRENGIYSGFDA 163


>Glyma10g03430.1 
          Length = 163

 Score =  187 bits (476), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 105/167 (62%), Positives = 120/167 (71%), Gaps = 7/167 (4%)

Query: 1   MKRTMPWVXXXXXXXXXXXXXXXXXXXXTGGKKPQGKSQKE---KGAVIDFDALKRYGYK 57
           MKRTMPW                     TGG   +GKS+K+   K  +IDF+ALKR+GY+
Sbjct: 1   MKRTMPWSDDDESSSSHSDSECDSE---TGGGNSKGKSRKQTTKKSGLIDFEALKRHGYR 57

Query: 58  GGPSVLKVPAPKEXXXXXXXXXXTGKEKRVDNKGIEESYEERQKTREALSQGEQLQTVLT 117
           GGPSVLKVPAPKE          TGKEK VD K IEESYEER+KTREA+S GE+L   LT
Sbjct: 58  GGPSVLKVPAPKEDDSKKNWSWSTGKEKHVD-KEIEESYEERKKTREAISLGEELPAALT 116

Query: 118 RSEKKNLSFSQKEKRKRELGQASRGKNYVEEEKRLLRDSGVYSGFDA 164
            ++KKNLSFSQKEKRKRELGQASRGKNYVEEEKRLLR++G+YSGFDA
Sbjct: 117 WNDKKNLSFSQKEKRKRELGQASRGKNYVEEEKRLLRENGIYSGFDA 163


>Glyma02g16410.2 
          Length = 137

 Score =  186 bits (473), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 99/134 (73%), Positives = 113/134 (84%), Gaps = 4/134 (2%)

Query: 34  PQGKSQK---EKGAVIDFDALKRYGYKGGPSVLKVPAPKEXXXXXXXXXXTGKEKRVDNK 90
           P+GKS+K   EK  VIDF+ALKR+GY+GGPSVLKVPAPKE          TGKEKRVD K
Sbjct: 5   PKGKSRKQKTEKSGVIDFEALKRHGYRGGPSVLKVPAPKEDDSKQDWSWSTGKEKRVD-K 63

Query: 91  GIEESYEERQKTREALSQGEQLQTVLTRSEKKNLSFSQKEKRKRELGQASRGKNYVEEEK 150
            IEESYEER+KTREA+S GE+L   LTR++KKN+SFSQKEKRKRELGQASRGKNYVEEEK
Sbjct: 64  EIEESYEERKKTREAISLGEELPAALTRNDKKNISFSQKEKRKRELGQASRGKNYVEEEK 123

Query: 151 RLLRDSGVYSGFDA 164
           RLLR++G+YSGFDA
Sbjct: 124 RLLRENGIYSGFDA 137