Miyakogusa Predicted Gene
- Lj5g3v1000960.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v1000960.2 tr|G7IDM5|G7IDM5_MEDTR Vicilin-like antimicrobial
peptides 2-2 OS=Medicago truncatula GN=MTR_1g07171,67.94,0,no
description,RmlC-like jelly roll fold; RmlC-like cupins,RmlC-like
cupin domain; Cupin,Cupin 1; se,CUFF.54490.2
(223 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g16440.1 254 4e-68
Glyma10g03390.1 240 8e-64
Glyma10g03390.3 193 1e-49
Glyma20g28460.2 91 1e-18
Glyma20g28640.1 91 1e-18
Glyma20g28460.1 90 2e-18
Glyma10g03390.2 84 2e-16
Glyma20g28660.1 80 1e-15
Glyma20g28650.1 80 1e-15
Glyma10g39150.1 80 1e-15
Glyma10g39170.1 73 2e-13
Glyma20g28650.2 65 6e-11
Glyma10g39170.2 61 1e-09
Glyma11g07020.1 56 3e-08
Glyma01g38340.1 49 4e-06
>Glyma02g16440.1
Length = 489
Score = 254 bits (650), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 125/222 (56%), Positives = 160/222 (72%), Gaps = 7/222 (3%)
Query: 1 MFRIPKQHVHALAP--KRTIWPFGGQSMAPFNLFSKRPIFSNEYGRLFEVGQNPSEDKSG 58
+F+I ++ V ALAP K + WPFGG+S A FN+FSKRP FSN YGRL EVG P ++KS
Sbjct: 269 IFKISRERVRALAPTKKSSWWPFGGESKAQFNIFSKRPTFSNGYGRLTEVG--PDDEKSW 326
Query: 59 LQGLNLMVTFANITNGCMSTLFYNTHSTPIAMVVEGEGHFEMACPHLXXXXXXXXXXXXX 118
LQ LNLM+TF NIT MST+ YN+H+T IA+V++G GH +++CPH+
Sbjct: 327 LQRLNLMLTFTNITQRSMSTIHYNSHATKIALVMDGRGHLQISCPHMSSRSDSKHDKSSP 386
Query: 119 XYQKISARLRPGTVFVVPAGHPFVTIASNKSNLMILRFEVNAKNNKKLTFAGKGNIVSAL 178
Y +ISA L+PG VFVVP GHPFVTIASNK NL+I+ FEVN ++NKK TFAGK NIVS+L
Sbjct: 387 SYHRISADLKPGMVFVVPPGHPFVTIASNKENLLIICFEVNVRDNKKFTFAGKDNIVSSL 446
Query: 179 DKTAKELSFDYPADKVDKIFERDEEFFFPGPEAFVESKERGH 220
D AKEL+F+YP++ V+ +FER E FFP + S+ERG
Sbjct: 447 DNVAKELAFNYPSEMVNGVFERKESLFFPFE---LPSEERGR 485
>Glyma10g03390.1
Length = 504
Score = 240 bits (613), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 118/210 (56%), Positives = 152/210 (72%), Gaps = 4/210 (1%)
Query: 1 MFRIPKQHVHALAP--KRTIWPFGGQSMAPFNLFSKRPIFSNEYGRLFEVGQNPSEDKSG 58
+F I ++ V ALAP K + WPFGG+S FN+FSKRP SN YGRL EVG + E KS
Sbjct: 282 IFAISREQVRALAPTKKSSWWPFGGESKPQFNIFSKRPTISNGYGRLTEVGPDDDE-KSW 340
Query: 59 LQGLNLMVTFANITNGCMSTLFYNTHSTPIAMVVEGEGHFEMACPHLXXXXXXXXXXXXX 118
LQ LNLM+TF NIT MST+ YN+H+T IA+V++G GH +++CPH+
Sbjct: 341 LQRLNLMLTFTNITQRSMSTIHYNSHATKIALVIDGRGHLQISCPHMSSRSSHSKHDKSS 400
Query: 119 -XYQKISARLRPGTVFVVPAGHPFVTIASNKSNLMILRFEVNAKNNKKLTFAGKGNIVSA 177
Y +IS+ L+PG VFVVP GHPFVTIASNK NL+++ FEVNA++NKK TFAGK NIVS+
Sbjct: 401 PSYHRISSDLKPGMVFVVPPGHPFVTIASNKENLLMICFEVNARDNKKFTFAGKDNIVSS 460
Query: 178 LDKTAKELSFDYPADKVDKIFERDEEFFFP 207
LD AKEL+F+YP++ V+ +F+R E FFFP
Sbjct: 461 LDNVAKELAFNYPSEMVNGVFDRKESFFFP 490
>Glyma10g03390.3
Length = 460
Score = 193 bits (490), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 123/174 (70%), Gaps = 4/174 (2%)
Query: 1 MFRIPKQHVHALAP--KRTIWPFGGQSMAPFNLFSKRPIFSNEYGRLFEVGQNPSEDKSG 58
+F I ++ V ALAP K + WPFGG+S FN+FSKRP SN YGRL EVG + E KS
Sbjct: 282 IFAISREQVRALAPTKKSSWWPFGGESKPQFNIFSKRPTISNGYGRLTEVGPDDDE-KSW 340
Query: 59 LQGLNLMVTFANITNGCMSTLFYNTHSTPIAMVVEGEGHFEMACPHLXXXXXXXXXXXXX 118
LQ LNLM+TF NIT MST+ YN+H+T IA+V++G GH +++CPH+
Sbjct: 341 LQRLNLMLTFTNITQRSMSTIHYNSHATKIALVIDGRGHLQISCPHMSSRSSHSKHDKSS 400
Query: 119 -XYQKISARLRPGTVFVVPAGHPFVTIASNKSNLMILRFEVNAKNNKKLTFAGK 171
Y +IS+ L+PG VFVVP GHPFVTIASNK NL+++ FEVNA++NKK TFAG+
Sbjct: 401 PSYHRISSDLKPGMVFVVPPGHPFVTIASNKENLLMICFEVNARDNKKFTFAGR 454
>Glyma20g28460.2
Length = 411
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 28 PFNLFSKRPIFSNEYGRLFEVGQNPSEDKSGLQGLNLMVTFANITNGCMSTLFYNTHSTP 87
PFNL S+ PI+SN +G+ FE+ E L+ L++ ++ +I G + +N+ +
Sbjct: 211 PFNLRSRNPIYSNNFGKFFEIT---PEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIV 267
Query: 88 IAMVVEGEGHFEMACPHLXXXXXXXXXXXXXXYQKISARLRPGTVFVVPAGHPFVTIASN 147
I ++ EG+ + E+ Q+ A L VFV+PA +PFV A+
Sbjct: 268 ILVINEGDANIELVGIK-EQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT- 325
Query: 148 KSNLMILRFEVNAKNNKKLTFAG-KGNIVSALDKTAKELSFDYPADKVDKIFERDEEFFF 206
SNL L F +NA+NN++ AG K N+V +++ +EL+F A V+++ ++ E +F
Sbjct: 326 -SNLNFLAFGINAENNQRNFLAGEKDNVVRQIERQVQELAFPGSAQDVERLLKKQRESYF 384
Query: 207 PGPEAFVESKERG 219
+A + KE G
Sbjct: 385 --VDAQPQQKEEG 395
>Glyma20g28640.1
Length = 439
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 28 PFNLFSKRPIFSNEYGRLFEVGQNPSEDKSGLQGLNLMVTFANITNGCMSTLFYNTHSTP 87
PFNL S+ PI+SN +G+ FE+ E L+ L++ ++ +I G + +N+ +
Sbjct: 239 PFNLRSRNPIYSNNFGKFFEIT---PEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIV 295
Query: 88 IAMVVEGEGHFEMACPHLXXXXXXXXXXXXXXYQKISARLRPGTVFVVPAGHPFVTIASN 147
I ++ EG+ + E+ Q+ A L VFV+PA +PFV A+
Sbjct: 296 ILVINEGDANIELVGIK-EQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT- 353
Query: 148 KSNLMILRFEVNAKNNKKLTFAG-KGNIVSALDKTAKELSFDYPADKVDKIFERDEEFFF 206
SNL L F +NA+NN++ AG K N+V +++ +EL+F A V+++ ++ E +F
Sbjct: 354 -SNLNFLAFGINAENNQRNFLAGEKDNVVRQIERQVQELAFPGSAQDVERLLKKQRESYF 412
Query: 207 PGPEAFVESKERG 219
+A + KE G
Sbjct: 413 --VDAQPQQKEEG 423
>Glyma20g28460.1
Length = 439
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 9/193 (4%)
Query: 28 PFNLFSKRPIFSNEYGRLFEVGQNPSEDKSGLQGLNLMVTFANITNGCMSTLFYNTHSTP 87
PFNL S+ PI+SN +G+ FE+ E L+ L++ ++ +I G + +N+ +
Sbjct: 239 PFNLRSRNPIYSNNFGKFFEIT---PEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIV 295
Query: 88 IAMVVEGEGHFEMACPHLXXXXXXXXXXXXXXYQKISARLRPGTVFVVPAGHPFVTIASN 147
I ++ EG+ + E+ Q+ A L VFV+PA +PFV A+
Sbjct: 296 ILVINEGDANIELVGIK-EQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAYPFVVNAT- 353
Query: 148 KSNLMILRFEVNAKNNKKLTFAG-KGNIVSALDKTAKELSFDYPADKVDKIFERDEEFFF 206
SNL L F +NA+NN++ AG K N+V +++ +EL+F A V+++ ++ E +F
Sbjct: 354 -SNLNFLAFGINAENNQRNFLAGEKDNVVRQIERQVQELAFPGSAQDVERLLKKQRESYF 412
Query: 207 PGPEAFVESKERG 219
+A + KE G
Sbjct: 413 --VDAQPQQKEEG 423
>Glyma10g03390.2
Length = 370
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Query: 1 MFRIPKQHVHALAP--KRTIWPFGGQSMAPFNLFSKRPIFSNEYGRLFEVGQNPSEDKSG 58
+F I ++ V ALAP K + WPFGG+S FN+FSKRP SN YGRL EVG + E KS
Sbjct: 282 IFAISREQVRALAPTKKSSWWPFGGESKPQFNIFSKRPTISNGYGRLTEVGPDDDE-KSW 340
Query: 59 LQGLNLMVTFANITN 73
LQ LNLM+TF NIT
Sbjct: 341 LQRLNLMLTFTNITQ 355
>Glyma20g28660.1
Length = 605
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 19/227 (8%)
Query: 1 MFRIPKQHVHALA------PKRTIWPFGGQSMAPFNLFSKRPIFSNEYGRLFEVGQNPSE 54
+ I K+ + AL+ ++TI PFNL S+ PI+SN+ G+ FE+ E
Sbjct: 376 IVEISKEQIRALSKRAKSSSRKTI----SSEDKPFNLRSRDPIYSNKLGKFFEIT---PE 428
Query: 55 DKSGLQGLNLMVTFANITNGCMSTLFYNTHSTPIAMVVEGEGHFEMACPHLXXXXXXXXX 114
L+ L++ ++ ++ G + +N+ + I ++ EG+ + E+
Sbjct: 429 KNPQLRDLDIFLSIVDMNEGALLLPHFNSKAIVILVINEGDANIELVGLK-EQQQEQQQE 487
Query: 115 XXXXXYQKISARLRPGTVFVVPAGHPFVTIASNKSNLMILRFEVNAKNNKKLTFAG-KGN 173
+K A L +FV+PAG+P V A+ SNL +NA+NN++ AG + N
Sbjct: 488 EQPLEVRKYRAELSEQDIFVIPAGYPVVVNAT--SNLNFFAIGINAENNQRNFLAGSQDN 545
Query: 174 IVSALDKTAKELSFDYPADKVDKIFERDEEFFFPGPEAFVESKERGH 220
++S + +EL+F A V+K+ + E +F +A + KE G+
Sbjct: 546 VISQIPSQVQELAFPGSAQAVEKLLKNQRESYF--VDAQPKKKEEGN 590
>Glyma20g28650.1
Length = 605
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 19/227 (8%)
Query: 1 MFRIPKQHVHALA------PKRTIWPFGGQSMAPFNLFSKRPIFSNEYGRLFEVGQNPSE 54
+ I K+ + AL+ ++TI PFNL S+ PI+SN+ G+ FE+ E
Sbjct: 376 IVEISKEQIRALSKRAKSSSRKTI----SSEDKPFNLRSRDPIYSNKLGKFFEIT---PE 428
Query: 55 DKSGLQGLNLMVTFANITNGCMSTLFYNTHSTPIAMVVEGEGHFEMACPHLXXXXXXXXX 114
L+ L++ ++ ++ G + +N+ + I ++ EG+ + E+
Sbjct: 429 KNPQLRDLDIFLSIVDMNEGALLLPHFNSKAIVILVINEGDANIELVGLK-EQQQEQQQE 487
Query: 115 XXXXXYQKISARLRPGTVFVVPAGHPFVTIASNKSNLMILRFEVNAKNNKKLTFAG-KGN 173
+K A L +FV+PAG+P V A+ SNL +NA+NN++ AG + N
Sbjct: 488 EQPLEVRKYRAELSEQDIFVIPAGYPVVVNAT--SNLNFFAIGINAENNQRNFLAGSQDN 545
Query: 174 IVSALDKTAKELSFDYPADKVDKIFERDEEFFFPGPEAFVESKERGH 220
++S + +EL+F A V+K+ + E +F +A + KE G+
Sbjct: 546 VISQIPSQVQELAFPGSAQAVEKLLKNQRESYF--VDAQPKKKEEGN 590
>Glyma10g39150.1
Length = 621
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 99/194 (51%), Gaps = 9/194 (4%)
Query: 28 PFNLFSKRPIFSNEYGRLFEVGQNPSEDKSGLQGLNLMVTFANITNGCMSTLFYNTHSTP 87
PFNL S+ PI+SN+ G+LFE+ E L+ L++ ++ ++ G + +N+ +
Sbjct: 421 PFNLRSRDPIYSNKLGKLFEIT---PEKNPQLRDLDVFLSVVDMNEGALFLPHFNSKAIV 477
Query: 88 IAMVVEGEGHFEMACPHLXXXXXXXXXXXXXXYQKISARLRPGTVFVVPAGHPFVTIASN 147
+ ++ EGE + E+ +K A L +FV+PAG+P V A+
Sbjct: 478 VLVINEGEANIELVGIK-EQQQRQQQEEQPLEVRKYRAELSEQDIFVIPAGYPVVVNAT- 535
Query: 148 KSNLMILRFEVNAKNNKKLTFAG-KGNIVSALDKTAKELSFDYPADKVDKIFERDEEFFF 206
S+L F +NA+NN++ AG K N++S + +EL+F A ++ + + E +F
Sbjct: 536 -SDLNFFAFGINAENNQRNFLAGSKDNVISQIPSQVQELAFPGSAKDIENLIKSQSESYF 594
Query: 207 PGPEAFVESKERGH 220
+A + KE G+
Sbjct: 595 --VDAQPQQKEEGN 606
>Glyma10g39170.1
Length = 584
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 12/172 (6%)
Query: 37 IFSNEYGRLFEVGQNPSEDKSGLQGLNLMVTFANITNGCMSTLFYNTHSTPIAMVVEGEG 96
I SN +G+ +E+ E L+ ++++ +I G + YN+ + I MV EGE
Sbjct: 405 ISSNNFGKFYEIT---PEKNPQLRDFDILLNTVDINEGGLLLPHYNSKAIVILMVTEGEA 461
Query: 97 HFEMACPHLXXXXXXXXXXXXXXYQKISARLRPGTVFVVPAGHPFVTIASNKSNLMILRF 156
+ E L +K A L +FV+PA +PFV A+ SNL + F
Sbjct: 462 NIE-----LVGLKEQQQGEETREVRKYRAELSEDDIFVIPAAYPFVVNAT--SNLNFVAF 514
Query: 157 EVNAKNNKKLTFAG-KGNIVSALDKTAKELSFDY-PADKVDKIFERDEEFFF 206
+NA+NN++ AG K N++ + K KEL+F A ++ + + E +F
Sbjct: 515 GINAENNQRNFLAGSKDNVIRQIQKQVKELAFPAGSAQDIENLIKNQRESYF 566
>Glyma20g28650.2
Length = 542
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 1 MFRIPKQHVHALA------PKRTIWPFGGQSMAPFNLFSKRPIFSNEYGRLFEVGQNPSE 54
+ I K+ + AL+ ++TI PFNL S+ PI+SN+ G+ FE+ E
Sbjct: 376 IVEISKEQIRALSKRAKSSSRKTI----SSEDKPFNLRSRDPIYSNKLGKFFEIT---PE 428
Query: 55 DKSGLQGLNLMVTFANITNGCMSTLFYNTHSTPIAMVVEGEGHFEMACPHLXXXXXXXXX 114
L+ L++ ++ ++ G + +N+ + I ++ EG+ + E+
Sbjct: 429 KNPQLRDLDIFLSIVDMNEGALLLPHFNSKAIVILVINEGDANIELVGLK-EQQQEQQQE 487
Query: 115 XXXXXYQKISARLRPGTVFVVPAGHPFVTIASNKSNLMILRFEVNAKNNKKLTFAG 170
+K A L +FV+PAG+P V A+ SNL +NA+NN++ AG
Sbjct: 488 EQPLEVRKYRAELSEQDIFVIPAGYPVVVNAT--SNLNFFAIGINAENNQRNFLAG 541
>Glyma10g39170.2
Length = 532
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 10/138 (7%)
Query: 37 IFSNEYGRLFEVGQNPSEDKSGLQGLNLMVTFANITNGCMSTLFYNTHSTPIAMVVEGEG 96
I SN +G+ +E+ E L+ ++++ +I G + YN+ + I MV EGE
Sbjct: 405 ISSNNFGKFYEIT---PEKNPQLRDFDILLNTVDINEGGLLLPHYNSKAIVILMVTEGEA 461
Query: 97 HFEMACPHLXXXXXXXXXXXXXXYQKISARLRPGTVFVVPAGHPFVTIASNKSNLMILRF 156
+ E L +K A L +FV+PA +PFV A+ SNL + F
Sbjct: 462 NIE-----LVGLKEQQQGEETREVRKYRAELSEDDIFVIPAAYPFVVNAT--SNLNFVAF 514
Query: 157 EVNAKNNKKLTFAGKGNI 174
+NA+NN++ AG +I
Sbjct: 515 GINAENNQRNFLAGTIHI 532
>Glyma11g07020.1
Length = 706
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 74/180 (41%), Gaps = 11/180 (6%)
Query: 24 QSMAPFNLFSKRPIFSNEYGRLFEVGQNPSEDKSGLQGLNLMVTFANITNGCMSTLFYNT 83
+ + +N+F P F N G + + KS L+ N+ N+ G + +N
Sbjct: 245 KKLETYNIFEHDPDFKNPIG--WSTAVTKKQLKS-LKRTNIGFLMVNLNMGSILGPHWNA 301
Query: 84 HSTPIAMVVEGEGHFEMACPHLXXXXXXXXXXXXXXYQKISARLRPGTVFVVPAGHPFVT 143
+T + + V+GEG + C Q + +++ G F+VP HP
Sbjct: 302 KATELTVGVDGEGMVRVVC--------GSGNENETECQNMRFKVKEGDAFLVPRFHPMAQ 353
Query: 144 IASNKSNLMILRFEVNAKNNKKLTFAGKGNIVSALDKTAKELSFDYPADKVDKIFERDEE 203
++ N + L F +AK N AGKG+++ LDK S +D++ E+
Sbjct: 354 MSFNNGPFVFLGFSTSAKKNHPQFLAGKGSVLHILDKKILARSLGVSNRTIDELLRSPED 413
>Glyma01g38340.1
Length = 521
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 88/224 (39%), Gaps = 25/224 (11%)
Query: 9 VHALAPKRTIWP------------FGGQS--MAPFNLFSKRPIFSNEYGRLFEVGQNPSE 54
VHA+ KR I G S + +N+F P F N G + +
Sbjct: 112 VHAVPEKRNILQELEASFLKNFLGIGSNSKKLKTYNIFDHDPDFKNPNG--WSTAVTKKQ 169
Query: 55 DKSGLQGLNLMVTFANITNGCMSTLFYNTHSTPIAMVVEGEGHFEMACPHLXXXXXXXXX 114
KS L+ N+ N+ G + +N +T + + V+G G + C
Sbjct: 170 LKS-LKRTNIGFLMVNLAMGSILGPHWNPKATELVVGVDGGGMVRVVC--------GSSN 220
Query: 115 XXXXXYQKISARLRPGTVFVVPAGHPFVTIASNKSNLMILRFEVNAKNNKKLTFAGKGNI 174
Q + +++ G F+VP HP ++ N + L F +AK N AGKG++
Sbjct: 221 EDETECQNMRFKVKEGDAFLVPRFHPMAQMSFNDGPFVFLGFSTSAKKNHPQFLAGKGSV 280
Query: 175 VSALDKTAKELSFDYPADKVDKIFERDEEFFFPGPEAFVESKER 218
+ LDK SF +D++ E+ G + E +E+
Sbjct: 281 LHILDKRILATSFGVSNRTIDQLLRSPEDSIIFGCSSCAEEEEK 324