Miyakogusa Predicted Gene

Lj5g3v0998610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0998610.1 Non Chatacterized Hit- tr|I1JNW0|I1JNW0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.50958
PE,63.16,0.0000000002, ,NODE_39624_length_518_cov_156.405411.path2.1
         (57 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g31200.1                                                        70   7e-13
Glyma19g34040.1                                                        65   2e-11
Glyma10g03330.1                                                        58   3e-09
Glyma02g16500.1                                                        56   9e-09

>Glyma03g31200.1 
          Length = 191

 Score = 69.7 bits (169), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 36/57 (63%), Positives = 39/57 (68%), Gaps = 6/57 (10%)

Query: 3  MLVVAQHR------SKSQGHGGFGYPSPSRHFRGMNCRAFQTGSGILPTPLKSCTTP 53
          ++VVAQHR      SKSQ H  FG  SPS  FRG+NCR FQTG GILPTPLK   TP
Sbjct: 7  LVVVAQHRNQCYTRSKSQRHAEFGSSSPSNDFRGINCRTFQTGCGILPTPLKRPKTP 63


>Glyma19g34040.1 
          Length = 187

 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/57 (57%), Positives = 39/57 (68%), Gaps = 6/57 (10%)

Query: 3  MLVVAQHRS------KSQGHGGFGYPSPSRHFRGMNCRAFQTGSGILPTPLKSCTTP 53
          ++VVAQHR+      K QGH  FG  S SR FR +NCR+FQTG G+LPTPLK   TP
Sbjct: 4  LVVVAQHRNQCYTRPKPQGHAEFGSSSHSRDFRAINCRSFQTGYGVLPTPLKRPKTP 60


>Glyma10g03330.1 
          Length = 201

 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 33/55 (60%), Positives = 38/55 (69%), Gaps = 9/55 (16%)

Query: 3  MLVVAQH-------RSKSQGHGGFGYPSPSRHFRGMNCRAFQTG-SGILPTPLKS 49
          + VV QH       RSKSQGH  FG  SPSR FR +NCR F++G +GILPTPLKS
Sbjct: 4  LFVVEQHNKNQYYNRSKSQGHARFGG-SPSRGFRDINCRTFESGRTGILPTPLKS 57


>Glyma02g16500.1 
          Length = 198

 Score = 55.8 bits (133), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 33/59 (55%), Positives = 40/59 (67%), Gaps = 8/59 (13%)

Query: 3  MLVVAQH------RSKSQGHGGFGYPSPSRHFRGMNCRAFQTG-SGILPTPLKSCTTPE 54
          + VV QH      RSKSQGH  FG  SPS  FR +NCR F++G +GILPTPLKS  +P+
Sbjct: 4  LFVVEQHKNQYCSRSKSQGHARFGG-SPSMGFRDINCRTFESGRTGILPTPLKSHGSPK 61