Miyakogusa Predicted Gene

Lj5g3v0976250.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0976250.2 tr|D7L1P0|D7L1P0_ARALL Time for coffee
OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479750
PE=4,30.92,5e-18,seg,NULL,CUFF.54476.2
         (475 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g16580.1                                                       404   e-112
Glyma10g03250.1                                                       353   2e-97
Glyma20g28260.1                                                       101   2e-21
Glyma10g39490.1                                                        83   6e-16
Glyma06g10030.1                                                        65   1e-10
Glyma17g17670.1                                                        64   3e-10

>Glyma02g16580.1 
          Length = 1158

 Score =  404 bits (1038), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 258/489 (52%), Positives = 299/489 (61%), Gaps = 53/489 (10%)

Query: 1   MKAIEAEPETLKLASSDIEIEIAELLTGLRSSKGHEFSSQKLEASMDHHALESCHSKDIE 60
           MK IE   +  K +SSD+EIEIAELL                              K +E
Sbjct: 187 MKEIEPVSKPSKSSSSDLEIEIAELL---------------------------YEKKKME 219

Query: 61  KNKLEEFKDPKYSCEDLLRIQGQEQPADVDCHENGSSAVPKEDIGEDKVNPXXXXXXXXX 120
            N       P  S ++L RI   EQ ADVD H   S   PKEDIGED++N          
Sbjct: 220 DNDNSSTLVPNNSTKELSRIP-IEQHADVDYHVCPSLEAPKEDIGEDRMN-SSAGFGDAS 277

Query: 121 XXXRFDAPTNESQSCSKLDADKQDSASTRMMCDVPDANTKRVGKFEIDLMATPPMMLSLE 180
              R  +PT ES SCSKLDA+K  S+S R+M   P+A  +RVGKFEIDLMA PPM LS E
Sbjct: 278 ADGRSVSPTKESPSCSKLDAEKPYSSSNRVMSAFPEAKAQRVGKFEIDLMAPPPMGLSPE 337

Query: 181 GDDLSKSQLTSETKALAPDVEMKRIDSIEVEDKAERPVNQEKTPEEIEEANMIEFKKKLN 240
            DDLS+    SETKALAPDVEMK+ DS++V    ERPV +EKTPEEIEEA M+ FK+K +
Sbjct: 338 VDDLSRGDFISETKALAPDVEMKKEDSVKV----ERPVKKEKTPEEIEEAKMVTFKEKFD 393

Query: 241 VLKHDLVTPNNDNDIMTNNKLEKQDRNKEQPSISSNPK-----VQKIDHS--SSVPLPAG 293
           VLKHD    NN NDI TNNKLE+QD N+E  +ISSNPK     +    HS  S + L  G
Sbjct: 394 VLKHDFEKQNNANDIKTNNKLEEQDGNRELATISSNPKEEITGICPFHHSYTSRILLYVG 453

Query: 294 VSGRPSNLTSIGC----KPLLQKVGETDKTKGGSSKSPQGVNSVLSQPKRKRCATHYYIA 349
                + L SI      KP LQ V +TDKT G  S + +  N VLSQ + KRCATHYYIA
Sbjct: 454 YINNVTLLRSITMIGRHKPPLQPVSKTDKTTG--SLTLKHANFVLSQRQPKRCATHYYIA 511

Query: 350 RNILHQQYTKMSPPLPAAIGPGSLCGIKPNNVDCVPSS-----SKQSQKHFPGVNQKGAQ 404
            NILHQQ TKM PPLPAAIG GS+C  K NNV+CVP +      KQSQKH P VNQ  +Q
Sbjct: 512 CNILHQQCTKMKPPLPAAIGSGSVCDTKHNNVNCVPYAESMAFGKQSQKHLPIVNQNASQ 571

Query: 405 EKVLVATSDPSLAAFRSSNNANPMDSTH-MQLVLQQGPYPGSIGTLV-GPAFVFGPGQHQ 462
           EK   ATS PSL A + SNN  PMDS H +QLVLQQGP PG  G LV GPAF++ PGQHQ
Sbjct: 572 EKGWAATSIPSLTAAKGSNNVKPMDSAHRVQLVLQQGPNPGPTGNLVHGPAFLYPPGQHQ 631

Query: 463 ASVAAPTNQ 471
           ASV A +NQ
Sbjct: 632 ASVTATSNQ 640


>Glyma10g03250.1 
          Length = 1217

 Score =  353 bits (906), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 257/520 (49%), Positives = 303/520 (58%), Gaps = 105/520 (20%)

Query: 1   MKAIEAEPETLKLASSDIEIEIAELLTGLRSSKGHEFSSQKLEASMDHHALESCHSKDIE 60
           MK IE   +T K +SSDIEIEIAELL GL++SK HE SS KLEAS+         S D E
Sbjct: 187 MKEIEPVSKTSKSSSSDIEIEIAELLYGLKTSKNHE-SSIKLEASVSP-------SDDAE 238

Query: 61  KNKLEEFKDPKY-----SCEDLLRIQGQEQPADVDCHENGSSAVPKEDIGEDKVNPXXXX 115
           K K+E+  +        S E+L RIQ  EQPADVD H   S   PKE+IG+   +     
Sbjct: 239 KKKMEDNNNSSTLFSNNSTEELSRIQ-IEQPADVDYHVGPSIEAPKENIGDASAD----- 292

Query: 116 XXXXXXXXRFDAPTNESQSCSKLDADKQDSASTRMMCD---------------VPDANTK 160
                   R  +PT ES SCS   A    SA   ++CD               VPDAN +
Sbjct: 293 -------GRSVSPTRESPSCSDFFAL---SAKLILICDQYPNFVMVQFIRISAVPDANAQ 342

Query: 161 RVGKFEIDLMATPPMMLSLEGDDLSKSQLTSETKALAPDVEMKRIDSIEVEDKAERPVNQ 220
            VGKFEIDLMA PPM LS EGDDLS+     ETKALA DVEMK+ +S++VE    RPV +
Sbjct: 343 LVGKFEIDLMAPPPMGLSPEGDDLSRGDFILETKALALDVEMKKENSVKVE----RPVKK 398

Query: 221 EKTPEEIEEANMIEFKKKLNVLKHDLVTPNNDNDIMTNNKLEKQDRNKEQPSISSNPKVQ 280
           EK PEEIEEA M+ F +KL+VLKHDL   NN +DI TNNKLE+QDRNKE  SISSNPK +
Sbjct: 399 EKIPEEIEEAKMVTFMEKLDVLKHDLEKKNNVHDIKTNNKLEEQDRNKELASISSNPKEE 458

Query: 281 KIDHSS----------------------SVPLPAGVS-----GRPSNLTSIGCKPLLQKV 313
           K + S+                      +V LP G+S       P N+      P    +
Sbjct: 459 KTEVSNVSFHLQFNLLQCLYQHLNQDGRAVSLPLGISLLLDNHFPRNM------PFSSFL 512

Query: 314 GETDKTKGGSSKSPQGVNSVLSQPKRKRCATHYYIARNILHQQYTKMSPPLPAAIGPGSL 373
              + T           N VLSQ K KRCATHYYIA NILHQQ+TKM+P LPAAIG GSL
Sbjct: 513 YFPNSTLC------LHANFVLSQRKPKRCATHYYIACNILHQQFTKMNPSLPAAIGSGSL 566

Query: 374 CGIKPNNVDCVPSSSKQSQKHFPGVNQKGAQEKVLVATSDPSLAAFRSSNNANPMDSTH- 432
           C  KPNNV+CVPS                A++K    TS+PSL A + SNN+NPMDS H 
Sbjct: 567 CSTKPNNVNCVPS----------------AEKKGWAVTSNPSLTAAKCSNNSNPMDSAHR 610

Query: 433 MQLVLQQGPYPGSIGTLV-GPAFVFGPGQHQASVAAPTNQ 471
           +QLVLQQGP PG  G LV GPAF++ PGQHQASV A TNQ
Sbjct: 611 VQLVLQQGPNPGPTGNLVHGPAFLYPPGQHQASVTATTNQ 650


>Glyma20g28260.1 
          Length = 1747

 Score =  101 bits (251), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 172/347 (49%), Gaps = 31/347 (8%)

Query: 128 PTNESQSCSKLDADKQDSASTRMMCDVPDANTKRVGKFEIDLMATPPMM----------- 176
           P  ES      D D++D  +T+    + +++ +R  KF+IDLMA PP             
Sbjct: 482 PKKESPVRQVADDDREDVKATKANHSISESDNQREEKFQIDLMAPPPPSRSSPERDVENN 541

Query: 177 --LSLEGDDLSKSQLTSETKALAPDVEMKRIDSIE-VEDKAERPVNQEKTPEEIEEANMI 233
             + ++ +   K     + K L  + E+  +  +E V+ KAE   +Q+  P  +++   I
Sbjct: 542 NNMVIDAEKEVKPMTKEDEKVLRMNKEVAMVIEMEKVKAKAEETDSQK--PSFVQKERGI 599

Query: 234 EFKKKLNVLKHDLVTPNNDNDIMTNNKLEKQDRNKEQPSISSNPKVQKIDHSSSVPLPAG 293
           + +  L++ K D V  + +   M N K + Q+  ++    +S   VQ    S+S+PLP  
Sbjct: 600 DLQ--LDLEKVDRVDTSGNVGSMVNKKQQHQNVQRQ--QTNSEKNVQ----SNSLPLPLS 651

Query: 294 VSGRPSNLTSIGCKPLLQKVGETDKTKGGSSKSPQGVNSVLSQPKRKRCATHYYIARNIL 353
           V   P  L  +G    LQ V   D T   S+  P   + + +QP+ KRCATH YIARNIL
Sbjct: 652 VPSWPGGLPPMGYMTPLQGVVSMDGTPVTSAAIPP-PHLLFNQPRPKRCATHCYIARNIL 710

Query: 354 -HQQYTKMSPPLPAAIGPGSLCGIKPNNVDCVPSSSKQSQKHFPGVNQKGAQEKVL-VAT 411
            HQQ  +M+   PAA G  SL G KP+N++ VPS+  +   + PG     +Q+K   +A 
Sbjct: 711 CHQQIARMNSFWPAAAGSASLYGAKPSNLNVVPST--ELHGNVPGRAANSSQDKGHGIAM 768

Query: 412 SDPSLAAFRSSNNANPMDSTHMQLVLQQGPYPGSI--GTLVGPAFVF 456
               +   ++S  A   +S+  Q++LQQ   PG+     L GPAF+F
Sbjct: 769 FPGHIGKDKASQPAIVDNSSRKQILLQQALPPGAAPSNILHGPAFIF 815


>Glyma10g39490.1 
          Length = 1507

 Score = 83.2 bits (204), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 90/163 (55%), Gaps = 5/163 (3%)

Query: 285 SSSVPLPAGVSGRPSNLTSIGCKPLLQKVGETDKTKGGSSKSPQGVNSVLSQPKRKRCAT 344
           S+S+PLP  V   P  L  +G    LQ V   D T   S+  P   + + +QP+ KRCAT
Sbjct: 578 SNSLPLPLSVPSWPGGLPPMGYMTPLQGVVSMDGTPVTSAAIPP-PHLLFNQPRPKRCAT 636

Query: 345 HYYIARNIL-HQQYTKMSPPLPAAIGPGSLCGIKPNNVDCVPSSSKQSQKHFPGVNQKGA 403
           H YIARNIL HQQ  +M+P  PAA G  SL G KP+N++  PS+  +   + P  +   +
Sbjct: 637 HCYIARNILYHQQIARMNPFWPAAAGSASLYGAKPSNLNVAPST--ELHGNVPCRSANSS 694

Query: 404 QEKVL-VATSDPSLAAFRSSNNANPMDSTHMQLVLQQGPYPGS 445
           Q+K   +A     +   ++S  AN  +S+  Q++LQQ   PG+
Sbjct: 695 QDKGHGIAMFPGHIGKDKASQPANVDNSSRKQILLQQALPPGA 737


>Glyma06g10030.1 
          Length = 230

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/111 (42%), Positives = 62/111 (55%), Gaps = 6/111 (5%)

Query: 298 PSNLTSIGCKPLLQKVGETDKTKGGSSK-SPQGVNSVLSQPKRKRCATHYYIARNIL-HQ 355
           PS L  +G    LQ V   D T   S+  SP  +  + +QP  KRCATH YIARNIL HQ
Sbjct: 1   PSGLPLMGYMTPLQGVVSMDGTPVKSTTISPPHL--LFNQPWPKRCATHCYIARNILCHQ 58

Query: 356 QYTKMSPPLPAAIGPGSLCGIKPNNVDCVPSSSKQSQKHFPGVNQKGAQEK 406
           Q  +M+   P   G  SL G KPNN++ VPS+  +  ++ PG     +Q+K
Sbjct: 59  QIARMNSFWPTTAGSASLYGGKPNNLNVVPST--ELHENVPGRAANSSQDK 107


>Glyma17g17670.1 
          Length = 87

 Score = 64.3 bits (155), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/108 (50%), Positives = 62/108 (57%), Gaps = 27/108 (25%)

Query: 171 ATPPMMLSLEGDDLSKSQLTSETKALAPDVEMKRIDSIEVEDKAERPVNQEKTPEEIEEA 230
           A PPM LS E DDL    LT E                       RPV +EK PEEIEEA
Sbjct: 6   APPPMGLSPEVDDL----LTEE-----------------------RPVKKEKIPEEIEEA 38

Query: 231 NMIEFKKKLNVLKHDLVTPNNDNDIMTNNKLEKQDRNKEQPSISSNPK 278
            ++ FK+K +VLKHDL   NN NDI TNNKLE+QD N+E  +I SNPK
Sbjct: 39  KIVTFKEKFDVLKHDLEKQNNANDIKTNNKLEEQDGNRELATILSNPK 86