Miyakogusa Predicted Gene

Lj5g3v0975430.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0975430.1 Non Chatacterized Hit- tr|I3T1V6|I3T1V6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4 SV=1,99.13,0,snRNP Sm
proteins,Ribonucleoprotein LSM domain, eukaryotic/archaea-type;
LSM,Ribonucleoprotein LSM d,CUFF.54415.1
         (115 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma19g33700.1                                                       187   2e-48
Glyma03g30880.1                                                       187   2e-48
Glyma18g52210.1                                                       186   5e-48
Glyma02g10640.1                                                       186   5e-48
Glyma02g10640.2                                                       119   8e-28
Glyma08g15260.1                                                        52   1e-07
Glyma05g31950.1                                                        52   1e-07
Glyma05g31950.2                                                        49   9e-07

>Glyma19g33700.1 
          Length = 114

 Score =  187 bits (476), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 93/98 (94%), Positives = 96/98 (97%)

Query: 1  MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKAVKLTLKGKNPVTLDHLSV 60
          MKLVRFLMKLNNETVSIELKNGT+VHGTITGVDISMNTHLK VKLTLKGKNPVTLDHLSV
Sbjct: 1  MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 61 RGTNIRYYILPDSLNLETLLVEEAPRVKPKKPTAGKPL 98
          RG NIRYYILPDSLNLETLLVEEAP++KPKKPTAGKPL
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEEAPKIKPKKPTAGKPL 98


>Glyma03g30880.1 
          Length = 114

 Score =  187 bits (476), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 93/98 (94%), Positives = 96/98 (97%)

Query: 1  MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKAVKLTLKGKNPVTLDHLSV 60
          MKLVRFLMKLNNETVSIELKNGT+VHGTITGVDISMNTHLK VKLTLKGKNPVTLDHLSV
Sbjct: 1  MKLVRFLMKLNNETVSIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 61 RGTNIRYYILPDSLNLETLLVEEAPRVKPKKPTAGKPL 98
          RG NIRYYILPDSLNLETLLVEEAP++KPKKPTAGKPL
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEEAPKIKPKKPTAGKPL 98


>Glyma18g52210.1 
          Length = 115

 Score =  186 bits (472), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 93/98 (94%), Positives = 95/98 (96%)

Query: 1  MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKAVKLTLKGKNPVTLDHLSV 60
          MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLK VKLTLKGKNPVTLDHLSV
Sbjct: 1  MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 61 RGTNIRYYILPDSLNLETLLVEEAPRVKPKKPTAGKPL 98
          RG NIRYYILPDSLNLETLLVEE P++KPKKPTAGKPL
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEETPKIKPKKPTAGKPL 98


>Glyma02g10640.1 
          Length = 116

 Score =  186 bits (472), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 93/98 (94%), Positives = 95/98 (96%)

Query: 1  MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKAVKLTLKGKNPVTLDHLSV 60
          MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLK VKLTLKGKNPVTLDHLSV
Sbjct: 1  MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV 60

Query: 61 RGTNIRYYILPDSLNLETLLVEEAPRVKPKKPTAGKPL 98
          RG NIRYYILPDSLNLETLLVEE P++KPKKPTAGKPL
Sbjct: 61 RGNNIRYYILPDSLNLETLLVEETPKIKPKKPTAGKPL 98


>Glyma02g10640.2 
          Length = 81

 Score =  119 bits (297), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 58/63 (92%), Positives = 60/63 (95%)

Query: 36 MNTHLKAVKLTLKGKNPVTLDHLSVRGTNIRYYILPDSLNLETLLVEEAPRVKPKKPTAG 95
          MNTHLK VKLTLKGKNPVTLDHLSVRG NIRYYILPDSLNLETLLVEE P++KPKKPTAG
Sbjct: 1  MNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSLNLETLLVEETPKIKPKKPTAG 60

Query: 96 KPL 98
          KPL
Sbjct: 61 KPL 63


>Glyma08g15260.1 
          Length = 131

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 49/92 (53%)

Query: 4   VRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKAVKLTLKGKNPVTLDHLSVRGT 63
           V+ L + +   V++ELK+G +  G++   + + N  L+++  T K      L+H+ +RG+
Sbjct: 9   VKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGS 68

Query: 64  NIRYYILPDSLNLETLLVEEAPRVKPKKPTAG 95
            +R+ ++PD L    +      R+K K  + G
Sbjct: 69  KVRFMVIPDMLKNAPMFKRLDARIKGKGASLG 100


>Glyma05g31950.1 
          Length = 131

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 49/92 (53%)

Query: 4   VRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKAVKLTLKGKNPVTLDHLSVRGT 63
           V+ L + +   V++ELK+G +  G++   + + N  L+++  T K      L+H+ +RG+
Sbjct: 9   VKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGS 68

Query: 64  NIRYYILPDSLNLETLLVEEAPRVKPKKPTAG 95
            +R+ ++PD L    +      R+K K  + G
Sbjct: 69  KVRFMVIPDMLKNAPMFKRLDARIKGKGASLG 100


>Glyma05g31950.2 
          Length = 117

 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 42/71 (59%)

Query: 4  VRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKAVKLTLKGKNPVTLDHLSVRGT 63
          V+ L + +   V++ELK+G +  G++   + + N  L+++  T K      L+H+ +RG+
Sbjct: 9  VKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQLEHVFIRGS 68

Query: 64 NIRYYILPDSL 74
           +R+ ++PD L
Sbjct: 69 KVRFMVIPDML 79