Miyakogusa Predicted Gene

Lj5g3v0962840.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0962840.1 tr|A8HMH0|A8HMH0_CHLRE Predicted protein
(Fragment) OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_14670,33.93,4e-18,R3H domain,NULL;
R3H-assoc,R3H-associated N-terminal domain; seg,NULL,CUFF.54379.1
         (246 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g03070.1                                                       410   e-115

>Glyma10g03070.1 
          Length = 244

 Score =  410 bits (1055), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 198/245 (80%), Positives = 217/245 (88%), Gaps = 1/245 (0%)

Query: 2   VLLHRELDLLLSTHLADPLKGDGAKSKGMSIEKKIEFLESFTGKVTNRRSRRWLNDRLLM 61
           ++LHRELD L S+   DP K D AKS GMSIEKKIEFLES TGKVTNRRSRRWLNDRLLM
Sbjct: 1   MVLHRELDHLFSSPFVDPPKDD-AKSSGMSIEKKIEFLESLTGKVTNRRSRRWLNDRLLM 59

Query: 62  ELVPRLNAEEIRGLFAPPPWGDEVPPSTFSMTNVEEWDRFRNIDMDKEVNIIHALENTLD 121
           ELVPRLNAEEIRGLFAPPPWGDEVPPSTFSMTN+EEWDRFRNIDMDKEVNIIH+LEN+++
Sbjct: 60  ELVPRLNAEEIRGLFAPPPWGDEVPPSTFSMTNMEEWDRFRNIDMDKEVNIIHSLENSIE 119

Query: 122 KKKGHVDADKLAVLNAWHRVDCKTRDALRRSSLSELIEGYEECVRTFITEKTDGDVLELQ 181
           K+KGH+DADK+AVLN WHR+DC+TRDALRRS LSELIEGYEECVR FITE TDGD+LELQ
Sbjct: 120 KRKGHIDADKMAVLNGWHRIDCRTRDALRRSCLSELIEGYEECVRAFITESTDGDILELQ 179

Query: 182 IQDPFHRLLLHGVCEFYNLASDTVTDFNGGESSXXXXXXXXXRGSPEILKITLSHFLKMT 241
           IQDPFHRLLLHGVCEFYNLASDTV+ +NG ESS         +GSP +  ITLSHFLKM+
Sbjct: 180 IQDPFHRLLLHGVCEFYNLASDTVSGYNGVESSRITKIKRKKKGSPVLPNITLSHFLKMS 239

Query: 242 KEGSW 246
           KEGSW
Sbjct: 240 KEGSW 244