Miyakogusa Predicted Gene

Lj5g3v0962410.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0962410.2 Non Chatacterized Hit- tr|D8T3E5|D8T3E5_SELML
Putative uncharacterized protein OS=Selaginella
moelle,52.58,0.0000000000001,seg,NULL; coiled-coil,NULL,CUFF.54353.2
         (168 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g02950.1                                                       101   5e-22
Glyma02g16830.1                                                        95   4e-20
Glyma10g02950.2                                                        69   2e-12

>Glyma10g02950.1 
          Length = 312

 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 66/124 (53%), Positives = 72/124 (58%)

Query: 45  GAGLRRCVSKEKEEDVLLEGMPDHYYDDEWQAKQXXXXXXXXXXXXXXXXXXXXXXXXXX 104
           GA LRRCV +EKEE+ LLEGMP  YYDDEWQA+Q                          
Sbjct: 34  GAVLRRCVKEEKEEEQLLEGMPKEYYDDEWQAQQREKTKELHRLRIQEEEEEERKIGEYR 93

Query: 105 XIGMRLKGYPEEDVRKARKLVSSFIRXXXXXXXXXXXXXXXXXLDELVLMVIWNRLDLAR 164
            IGMRLK YPE+DV KARKLVSSF+R                 L ELVLMVIWNRLDLAR
Sbjct: 94  EIGMRLKEYPEDDVIKARKLVSSFLRAAEEVEERIEEAAEKGELTELVLMVIWNRLDLAR 153

Query: 165 RDDE 168
           RD+E
Sbjct: 154 RDEE 157


>Glyma02g16830.1 
          Length = 286

 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/121 (51%), Positives = 67/121 (55%)

Query: 48  LRRCVSKEKEEDVLLEGMPDHYYDDEWQAKQXXXXXXXXXXXXXXXXXXXXXXXXXXXIG 107
           LRRCV +EKEE+ LLEGMP  YYDDEWQ +Q                           IG
Sbjct: 1   LRRCVKEEKEEEELLEGMPKEYYDDEWQTQQREKTKELHPLRKQEEEEEERKIEEYREIG 60

Query: 108 MRLKGYPEEDVRKARKLVSSFIRXXXXXXXXXXXXXXXXXLDELVLMVIWNRLDLARRDD 167
           MRLK YPEEDV KARKLVSSF+R                   ELVLMVIWNRLDLAR D+
Sbjct: 61  MRLKEYPEEDVIKARKLVSSFLRAAEEVEERIEEAAKKGEFTELVLMVIWNRLDLARHDE 120

Query: 168 E 168
           E
Sbjct: 121 E 121


>Glyma10g02950.2 
          Length = 216

 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/61 (62%), Positives = 41/61 (67%)

Query: 108 MRLKGYPEEDVRKARKLVSSFIRXXXXXXXXXXXXXXXXXLDELVLMVIWNRLDLARRDD 167
           MRLK YPE+DV KARKLVSSF+R                 L ELVLMVIWNRLDLARRD+
Sbjct: 1   MRLKEYPEDDVIKARKLVSSFLRAAEEVEERIEEAAEKGELTELVLMVIWNRLDLARRDE 60

Query: 168 E 168
           E
Sbjct: 61  E 61