Miyakogusa Predicted Gene

Lj5g3v0962370.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0962370.1 Non Chatacterized Hit- tr|C4JBA6|C4JBA6_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,67.61,1e-16,seg,NULL;
coiled-coil,NULL; PGBD-like,Peptidoglycan binding-like; no
description,Peptidoglycan bindi,CUFF.54343.1
         (390 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g33590.2                                                       331   9e-91
Glyma10g33590.1                                                       331   9e-91
Glyma20g34000.2                                                       247   2e-65
Glyma20g34000.1                                                       247   2e-65

>Glyma10g33590.2 
          Length = 385

 Score =  331 bits (848), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 164/216 (75%), Positives = 183/216 (84%), Gaps = 3/216 (1%)

Query: 175 TLRVGSEGEEVRQMQEALLKLGFYSGEEDMEFSSFSSGTERAVKTWQASLGAPEDGIMTS 234
           +LR+GSEGEEVRQMQEALLKLGFYSGEEDME+SSFSSGTERAVKTWQA+LGAPEDGIMT+
Sbjct: 173 SLRIGSEGEEVRQMQEALLKLGFYSGEEDMEYSSFSSGTERAVKTWQAALGAPEDGIMTA 232

Query: 235 ELIERLYLEIATPTNDKGSTNENKISTTVLRKESENGSAVASVTEISDIQQKVVGGGVKE 294
           EL+ERLYLEI       GS  ++K STTVL KE ENG+AVASV E S++QQK V    KE
Sbjct: 233 ELLERLYLEIRNKGT--GSATQDKQSTTVLPKEVENGAAVASVAENSEVQQKDVKND-KE 289

Query: 295 TEASRPRVFLLGENRWEDSSKLGASDGVDRSKNKDGTTKCVQCRGEGRLLCTECDGGGEP 354
           TE S   VFLLGENRWE+ S+L A DGVD+SKNKD TTKC+QCRGEGRL+CTECDG GEP
Sbjct: 290 TEVSHRGVFLLGENRWEEPSRLVARDGVDKSKNKDMTTKCLQCRGEGRLMCTECDGSGEP 349

Query: 355 NIEPQFMELVEDGTKCPYCEGLGYTPCDLCGGIPTV 390
           NIEPQF+E VE+GTKCPYC+GLGYT CDLCGG   V
Sbjct: 350 NIEPQFIEWVEEGTKCPYCKGLGYTVCDLCGGKTMV 385



 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 50/96 (52%), Gaps = 3/96 (3%)

Query: 4  SSLVPFTVTATILFNRTLSLPKPHFISLSYKSKPSS-VCYCSNSDREDXXXXXXXXXXXX 62
          S L+P  VTAT +   T +LP  +   LSYK K +S V +CS SDRE+            
Sbjct: 3  SILLP--VTATPISTLTKTLPLSNHYLLSYKFKFNSLVRHCSLSDREEQRWLREEQRWLR 60

Query: 63 XXXXXXXXXXXXTRDREELLREISELKLQIQTLEHR 98
                       R+R++LLREI++L LQIQ LE R
Sbjct: 61 DERRWLREEQRWARERDQLLREIADLNLQIQALERR 96


>Glyma10g33590.1 
          Length = 385

 Score =  331 bits (848), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 164/216 (75%), Positives = 183/216 (84%), Gaps = 3/216 (1%)

Query: 175 TLRVGSEGEEVRQMQEALLKLGFYSGEEDMEFSSFSSGTERAVKTWQASLGAPEDGIMTS 234
           +LR+GSEGEEVRQMQEALLKLGFYSGEEDME+SSFSSGTERAVKTWQA+LGAPEDGIMT+
Sbjct: 173 SLRIGSEGEEVRQMQEALLKLGFYSGEEDMEYSSFSSGTERAVKTWQAALGAPEDGIMTA 232

Query: 235 ELIERLYLEIATPTNDKGSTNENKISTTVLRKESENGSAVASVTEISDIQQKVVGGGVKE 294
           EL+ERLYLEI       GS  ++K STTVL KE ENG+AVASV E S++QQK V    KE
Sbjct: 233 ELLERLYLEIRNKGT--GSATQDKQSTTVLPKEVENGAAVASVAENSEVQQKDVKND-KE 289

Query: 295 TEASRPRVFLLGENRWEDSSKLGASDGVDRSKNKDGTTKCVQCRGEGRLLCTECDGGGEP 354
           TE S   VFLLGENRWE+ S+L A DGVD+SKNKD TTKC+QCRGEGRL+CTECDG GEP
Sbjct: 290 TEVSHRGVFLLGENRWEEPSRLVARDGVDKSKNKDMTTKCLQCRGEGRLMCTECDGSGEP 349

Query: 355 NIEPQFMELVEDGTKCPYCEGLGYTPCDLCGGIPTV 390
           NIEPQF+E VE+GTKCPYC+GLGYT CDLCGG   V
Sbjct: 350 NIEPQFIEWVEEGTKCPYCKGLGYTVCDLCGGKTMV 385



 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 50/96 (52%), Gaps = 3/96 (3%)

Query: 4  SSLVPFTVTATILFNRTLSLPKPHFISLSYKSKPSS-VCYCSNSDREDXXXXXXXXXXXX 62
          S L+P  VTAT +   T +LP  +   LSYK K +S V +CS SDRE+            
Sbjct: 3  SILLP--VTATPISTLTKTLPLSNHYLLSYKFKFNSLVRHCSLSDREEQRWLREEQRWLR 60

Query: 63 XXXXXXXXXXXXTRDREELLREISELKLQIQTLEHR 98
                       R+R++LLREI++L LQIQ LE R
Sbjct: 61 DERRWLREEQRWARERDQLLREIADLNLQIQALERR 96


>Glyma20g34000.2 
          Length = 338

 Score =  247 bits (630), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 131/178 (73%), Positives = 145/178 (81%), Gaps = 3/178 (1%)

Query: 175 TLRVGSEGEEVRQMQEALLKLGFYSGEEDMEFSSFSSGTERAVKTWQASLGAPEDGIMTS 234
           +LR+GSEGEEVRQMQEALLKLGFYSGEEDME+SSFSSGTERAVKTWQA+LGAPEDGIMT+
Sbjct: 156 SLRIGSEGEEVRQMQEALLKLGFYSGEEDMEYSSFSSGTERAVKTWQAALGAPEDGIMTA 215

Query: 235 ELIERLYLEIATPTNDKGSTNENKISTTVLRKESENGSAVASVTEISDIQQKVVGGGVKE 294
           EL+ERLYLEI     D GS  ++K STTVL KE ENG+AVASV E S+ QQK V    K 
Sbjct: 216 ELLERLYLEIR--NKDTGSATQDKQSTTVLPKEVENGAAVASVAENSEGQQKDVKSD-KG 272

Query: 295 TEASRPRVFLLGENRWEDSSKLGASDGVDRSKNKDGTTKCVQCRGEGRLLCTECDGGG 352
           TE S   VFLLGENRWE+ S+L   +GVDRSKNKD TTKC+QCRGEGRLLCT    GG
Sbjct: 273 TEVSHRGVFLLGENRWEEPSRLFTRNGVDRSKNKDVTTKCLQCRGEGRLLCTVFGMGG 330



 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 13/96 (13%)

Query: 3  SSSLVPFTVTATILFNRTLSLPKPHFISLSYKSKPSSVCYCSNSDREDXXXXXXXXXXXX 62
          SS+L+P T T      +TL LPKP+   LSYK K +++ +     R              
Sbjct: 2  SSTLLPVTATPIFTLTKTLPLPKPYL--LSYKFKFNTLRWLREEQR-----------WLR 48

Query: 63 XXXXXXXXXXXXTRDREELLREISELKLQIQTLEHR 98
                       R+R++LLREI++LKLQIQ LE R
Sbjct: 49 DEHRWLREEQRWARERDQLLREIADLKLQIQALERR 84


>Glyma20g34000.1 
          Length = 338

 Score =  247 bits (630), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 131/178 (73%), Positives = 145/178 (81%), Gaps = 3/178 (1%)

Query: 175 TLRVGSEGEEVRQMQEALLKLGFYSGEEDMEFSSFSSGTERAVKTWQASLGAPEDGIMTS 234
           +LR+GSEGEEVRQMQEALLKLGFYSGEEDME+SSFSSGTERAVKTWQA+LGAPEDGIMT+
Sbjct: 156 SLRIGSEGEEVRQMQEALLKLGFYSGEEDMEYSSFSSGTERAVKTWQAALGAPEDGIMTA 215

Query: 235 ELIERLYLEIATPTNDKGSTNENKISTTVLRKESENGSAVASVTEISDIQQKVVGGGVKE 294
           EL+ERLYLEI     D GS  ++K STTVL KE ENG+AVASV E S+ QQK V    K 
Sbjct: 216 ELLERLYLEIR--NKDTGSATQDKQSTTVLPKEVENGAAVASVAENSEGQQKDVKSD-KG 272

Query: 295 TEASRPRVFLLGENRWEDSSKLGASDGVDRSKNKDGTTKCVQCRGEGRLLCTECDGGG 352
           TE S   VFLLGENRWE+ S+L   +GVDRSKNKD TTKC+QCRGEGRLLCT    GG
Sbjct: 273 TEVSHRGVFLLGENRWEEPSRLFTRNGVDRSKNKDVTTKCLQCRGEGRLLCTVFGMGG 330



 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 13/96 (13%)

Query: 3  SSSLVPFTVTATILFNRTLSLPKPHFISLSYKSKPSSVCYCSNSDREDXXXXXXXXXXXX 62
          SS+L+P T T      +TL LPKP+   LSYK K +++ +     R              
Sbjct: 2  SSTLLPVTATPIFTLTKTLPLPKPYL--LSYKFKFNTLRWLREEQR-----------WLR 48

Query: 63 XXXXXXXXXXXXTRDREELLREISELKLQIQTLEHR 98
                       R+R++LLREI++LKLQIQ LE R
Sbjct: 49 DEHRWLREEQRWARERDQLLREIADLKLQIQALERR 84