Miyakogusa Predicted Gene

Lj5g3v0920980.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0920980.1 Non Chatacterized Hit- tr|A2YZ98|A2YZ98_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,33.89,1e-18,coiled-coil,NULL; seg,NULL,CUFF.54228.1
         (337 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma02g29410.1                                                       374   e-104
Glyma09g17240.1                                                       368   e-102
Glyma11g04480.1                                                       108   8e-24
Glyma11g04480.2                                                        96   5e-20

>Glyma02g29410.1 
          Length = 326

 Score =  374 bits (961), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 207/337 (61%), Positives = 234/337 (69%), Gaps = 30/337 (8%)

Query: 1   MKASLKFRDEQKKPLFRAKVPLSVLGMPFQSGIVAGDSKELTLNLATFFQSGPSIRASYR 60
           MKASLKFR+E KKPLFRAKVPLS+LG PFQSGIVAG+SKELTLNL TFF+SGPS++ +YR
Sbjct: 1   MKASLKFREEHKKPLFRAKVPLSILGKPFQSGIVAGESKELTLNLCTFFESGPSLKVAYR 60

Query: 61  PNDSKNPFSVVVKTGTGPFGSPLSGSMLMSCEFNLLARSGGPLFMLHFKPRFGDFTFKKT 120
           PNDSKNPFS++VKTGTGPFGSPL  SMLMSCEF++  R+G PLFMLHFKPRFGDFTFKKT
Sbjct: 61  PNDSKNPFSLIVKTGTGPFGSPLKSSMLMSCEFSVPGRTGSPLFMLHFKPRFGDFTFKKT 120

Query: 121 QXXXXX----XXXXXXXXXXXXXXXVVEKPVIGSFSAGKVPIFGSDSPAAGAIVSAFSGM 176
           Q                         VE P++ S    KV I G    A+GA+   FSG+
Sbjct: 121 QSSIFDGKGFGSLNTQNDAVELENGTVETPLMES---AKVSILGDG--ASGAVAGMFSGV 175

Query: 177 EVAARTTLPVRGRAAVNFRWGVRVPAEVKAIGNNSSGAFQRIPFLVMDKIGFELLPELNG 236
           EVAARTTLPVRGRAAV FRWGVRVP+E K  GNN   AFQ+IPFLVMDKIG E + E   
Sbjct: 176 EVAARTTLPVRGRAAVKFRWGVRVPSEFK--GNN---AFQKIPFLVMDKIGVEHMMECG- 229

Query: 237 ELKKGNGGASEGSGFVAGSDVAEACLAVKRQMEVLQLENGSLRSAVEDLRREIGGGRYRK 296
            + K    A E S   A +DVAEAC AVKRQMEVLQ ENG LR+AVEDLRREI G R   
Sbjct: 230 -VSKEKVSAGEKSRVPASADVAEACFAVKRQMEVLQAENGLLRNAVEDLRREIVGVR--- 285

Query: 297 IEKSVVKGKNTDGRKNEKKTAPDFSGFPGKSLESDVA 333
                          NEKKT  D+  FPGKS E++ +
Sbjct: 286 -----------TSSSNEKKTTSDYGNFPGKSTEAEAS 311


>Glyma09g17240.1 
          Length = 314

 Score =  368 bits (944), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 205/336 (61%), Positives = 230/336 (68%), Gaps = 41/336 (12%)

Query: 1   MKASLKFRDEQKKPLFRAKVPLSVLGMPFQSGIVAGDSKELTLNLATFFQSGPSIRASYR 60
           MKASLKFR+EQ+KPL RAKVPL +LGMPFQSGIVAG+SKELTLNL+TFF+SGPS++ +YR
Sbjct: 1   MKASLKFREEQQKPLLRAKVPLGILGMPFQSGIVAGESKELTLNLSTFFESGPSLKVAYR 60

Query: 61  PNDSKNPFSVVVKTGTGPFGSPLSGSMLMSCEFNLLARSGGPLFMLHFKPRFGDFTFKKT 120
           PNDSKNPFS +VKTGTGPFGSPL  SMLMSCEFNL   +G PLFMLHFKPRFGDFTFKKT
Sbjct: 61  PNDSKNPFSFIVKTGTGPFGSPLKSSMLMSCEFNLPGTTGTPLFMLHFKPRFGDFTFKKT 120

Query: 121 QXXXXXXX---XXXXXXXXXXXXXVVEKPVIGSFSAGKVPIFGSDSPAAGAIVSAFSGME 177
           Q                         E P++ S    KV I  S +       S FSGME
Sbjct: 121 QSSIFDGKGFGSFNTQNDAVENGNNAETPLMES---AKVSILDSGA-------SMFSGME 170

Query: 178 VAARTTLPVRGRAAVNFRWGVRVPAEVKAIGNNSSGAFQRIPFLVMDKIGFELLPELNGE 237
           VAARTTLPVRGRAAV FRWGVR+PAE K  GNN   AFQ+IPFLVMDKIG E + E  G+
Sbjct: 171 VAARTTLPVRGRAAVKFRWGVRIPAEFK--GNN---AFQKIPFLVMDKIGVEHMMEC-GD 224

Query: 238 LKKGNGGASEGSGFVAGSDVAEACLAVKRQMEVLQLENGSLRSAVEDLRREIGGGRYRKI 297
            KKG G A E     A +DVAEAC AVKRQMEVLQ ENG LR+AVEDLRREI        
Sbjct: 225 SKKGKGDAGEKPRVPASADVAEACFAVKRQMEVLQAENGLLRNAVEDLRREI-------- 276

Query: 298 EKSVVKGKNTDGRKNEKKTAPDFSGFPGKSLESDVA 333
                         NE+KT  D+  FPGKS E++ +
Sbjct: 277 --------------NERKTTSDYGNFPGKSTEAEAS 298


>Glyma11g04480.1 
          Length = 370

 Score =  108 bits (270), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 142/326 (43%), Gaps = 44/326 (13%)

Query: 1   MKASLKFRDEQKKP----------LFRAKVPLSVLGMPFQSGIVAG----DSKELTLNLA 46
           MK SLK   E +K           +  AKVP+S+L  PF SG+ A        E + +L+
Sbjct: 1   MKLSLKLDGENEKQNLQQQQHSSQIMTAKVPISILNKPFLSGVTASTGTHSPSEFSFSLS 60

Query: 47  TFFQSGPSIRASYRPNDSKNPFSVVVKTGTGPFGSPLSGSMLMSCEFNLLARSGGPLFML 106
           T F SGPS+R SY P  S  PFS+ +K+G G  GSP    ++ S  F+L   S  P F L
Sbjct: 61  TNFPSGPSLRLSYSPTASA-PFSLSLKSGLGLLGSPAHSPLVFSANFSL---SPTPSFFL 116

Query: 107 HFKPRFGDFTFKKTQXXXXXXXXXXXXXXXXXXXXVVEK--PVIGSFSAGKVPIFGSDSP 164
           HFKPRFG F+  KT                     +V       G  +    P   SD  
Sbjct: 117 HFKPRFGHFSLHKTVFSDTITHTHSLSTSFPPTPEIVPHGSSTTGWHNLKLEPSANSDQS 176

Query: 165 AAGAIVSAFS---------GMEVAARTTLPVRGRAAVNFRWGVRVPAEVKAIGNNSSGAF 215
                   F          G+ V ART +PV     +NFRWGV  P    +         
Sbjct: 177 NNNTYFENFKNDAKNALSPGVRVMARTVMPVTKGFLLNFRWGVNFPRNFGS--------- 227

Query: 216 QRIPFLVMDKIGFELLPELNGELKKGNGGASEGSGFVAGSDVAE---ACLAVKRQMEVLQ 272
            ++P L ++KIG E + E  G+ KK N    +     +G D+      C  + R +E+++
Sbjct: 228 -KMPSLTVNKIGLERVEE--GKEKKNNNDDKKQMRDSSGIDLKLLKGMCFWMGRDLEIME 284

Query: 273 LENGSLRSAVEDLRREIGGGRYRKIE 298
            EN  ++  +++++  I   R  + E
Sbjct: 285 KENREMKRLLDEMKLGISSTRNSREE 310


>Glyma11g04480.2 
          Length = 310

 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 135/313 (43%), Gaps = 78/313 (24%)

Query: 1   MKASLKFRDEQKKP----------LFRAKVPLSVLGMPFQSGIVAG----DSKELTLNLA 46
           MK SLK   E +K           +  AKVP+S+L  PF SG+ A        E + +L+
Sbjct: 1   MKLSLKLDGENEKQNLQQQQHSSQIMTAKVPISILNKPFLSGVTASTGTHSPSEFSFSLS 60

Query: 47  TFFQSGPSIRASYRPNDSKNPFSVVVKTGTGPFGSPLSGSMLMSCEFNLLARSGGPLFML 106
           T F SGPS+R SY P  S  PFS+ +K+G G  GSP    ++ S  F+L   S  P F L
Sbjct: 61  TNFPSGPSLRLSYSPTASA-PFSLSLKSGLGLLGSPAHSPLVFSANFSL---SPTPSFFL 116

Query: 107 HFKPRFGDFTFKKTQXXXXXXXXXXXXXXXXXXXXVVEKPVIGSFSAGKVPIFGSDSPAA 166
           HFKPRFG F+  KT                             S S    P     +P  
Sbjct: 117 HFKPRFGHFSLHKTVFSDTITH-------------------THSLSTSFPP-----TPEI 152

Query: 167 GAIVSAFS-GMEVAARTTLPVRGRAAVNFRWGVRVPAEVKAIGNNSSGAFQRIPFLVMDK 225
               +A S G+ V ART +PV     +NFRWGV  P   +  G+       ++P L ++K
Sbjct: 153 NDAKNALSPGVRVMARTVMPVTKGFLLNFRWGVNFP---RNFGS-------KMPSLTVNK 202

Query: 226 IGFELLPELNGELKKGNGGASEGSGFVAGSDVAEACLAVKRQMEVLQLENGSLRSAVEDL 285
           IG E L  L G                        C  + R +E+++ EN  ++  ++++
Sbjct: 203 IGLERL--LKG-----------------------MCFWMGRDLEIMEKENREMKRLLDEM 237

Query: 286 RREIGGGRYRKIE 298
           +  I   R  + E
Sbjct: 238 KLGISSTRNSREE 250