Miyakogusa Predicted Gene

Lj5g3v0875710.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0875710.1 tr|Q8H2U6|Q8H2U6_ORYSJ Os07g0661700 protein
OS=Oryza sativa subsp. japonica GN=P0453E03.109 PE=4
SV=,52.81,0.00000000000001,coiled-coil,NULL,CUFF.54141.1
         (113 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g15860.1                                                       163   5e-41
Glyma10g15860.2                                                       155   1e-38

>Glyma10g15860.1 
          Length = 116

 Score =  163 bits (412), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 85/113 (75%), Positives = 94/113 (83%)

Query: 1   MVESVKLCDLELTLKPFYQRASEAEDRLSRLEAAFNSRKDTGNEEESKVINDLQSKLKDA 60
           M E  K  D ELTLKPFYQRASEAE+RLSRLEAA NS+K TGNEE  KVINDLQSKL+ A
Sbjct: 1   MAERAKPIDFELTLKPFYQRASEAEERLSRLEAALNSKKGTGNEENLKVINDLQSKLEVA 60

Query: 61  NAELISEKEKVQMLAAENEKLQNRIIHLVRALKDADLKLEQVSAGEQLESLKL 113
           N ELISEKEK QML AEN KLQ RIIHL+RALK+ADLKLE+ +  EQL+S+KL
Sbjct: 61  NVELISEKEKAQMLVAENAKLQYRIIHLLRALKEADLKLEKATVHEQLQSMKL 113


>Glyma10g15860.2 
          Length = 106

 Score =  155 bits (391), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 81/103 (78%), Positives = 87/103 (84%)

Query: 1   MVESVKLCDLELTLKPFYQRASEAEDRLSRLEAAFNSRKDTGNEEESKVINDLQSKLKDA 60
           M E  K  D ELTLKPFYQRASEAE+RLSRLEAA NS+K TGNEE  KVINDLQSKL+ A
Sbjct: 1   MAERAKPIDFELTLKPFYQRASEAEERLSRLEAALNSKKGTGNEENLKVINDLQSKLEVA 60

Query: 61  NAELISEKEKVQMLAAENEKLQNRIIHLVRALKDADLKLEQVS 103
           N ELISEKEK QML AEN KLQ RIIHL+RALK+ADLKLE+VS
Sbjct: 61  NVELISEKEKAQMLVAENAKLQYRIIHLLRALKEADLKLEKVS 103