Miyakogusa Predicted Gene
- Lj5g3v0868340.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0868340.1 Non Chatacterized Hit- tr|I1JGE1|I1JGE1_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,80.31,0,SAP,DNA-binding SAP;
AP_NUCLEASE_F1_4,Exodeoxyribonuclease III xth; Putative DNA-binding
(bihelical),CUFF.54085.1
(544 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g34700.1 812 0.0
Glyma10g16340.1 257 3e-68
Glyma10g16370.1 200 3e-51
Glyma02g34660.1 150 4e-36
Glyma04g36610.2 107 5e-23
Glyma04g36610.1 107 5e-23
Glyma10g16330.1 88 3e-17
Glyma02g05430.1 87 4e-17
Glyma16g23850.1 54 4e-07
>Glyma02g34700.1
Length = 512
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/513 (76%), Positives = 434/513 (84%), Gaps = 7/513 (1%)
Query: 38 MGSQRLFSNSSQPMLPFVEEKKDMKLNKGLEASPGSKKHVIKGNDANSYSIEIERLRNDP 97
MGS+R FSNSS+P+ PFVE+ K++KL KGLEASPGSKK V++ ND NSYSIEI+RLRNDP
Sbjct: 1 MGSKRPFSNSSKPLSPFVEDTKNVKL-KGLEASPGSKKLVVEENDVNSYSIEIQRLRNDP 59
Query: 98 SIVDTMTVQELRKTLKSIRVPAKGRKEDLLSTLKSFMDNNMGEQHPQIEEEHGLLISSEN 157
+IVDTMTV ELRKTLK +VPAKGRK+DLLS LKSFMDNNM EQ ++E+ GLLISSEN
Sbjct: 60 TIVDTMTVHELRKTLKRFKVPAKGRKDDLLSALKSFMDNNMCEQDSHLQEKQGLLISSEN 119
Query: 158 TSVEVKTKKV-DEDHVDDINDNPEVFEHSRGKRRLKQSGXXXXXXXXXXXXXXXXXXD-- 214
SVEVK K V DEDH++++N+ PE+ E ++GKRRL QS
Sbjct: 120 ASVEVKAKTVLDEDHIENVNETPEISELNQGKRRLNQSESERKTIKVTTKKKLRINHQYY 179
Query: 215 ---EVSDFKPSRAKXXXXXXXXXXXXXXDEISTTTIPTEPWTVLAHKKPQKDWIAYNPKT 271
DFKPSRAK +EIST TI TEPWTVLAHKKPQK WIAYNP+T
Sbjct: 180 MVFSPPDFKPSRAKKKVSSDFASIVVQSEEISTATIQTEPWTVLAHKKPQKGWIAYNPRT 239
Query: 272 MRPQPLTRDTKFVKLLSWNVNGLRALLKLEGFSALELAQREDFDVLCLQETKLQEKDINE 331
MRP L +DTKFVKLLSWNVNGLRALLKLEGFSAL+LAQREDFDVLCLQETKLQEKDI E
Sbjct: 240 MRPPSLAQDTKFVKLLSWNVNGLRALLKLEGFSALQLAQREDFDVLCLQETKLQEKDIEE 299
Query: 332 IKRQLIDGYENSFWTCSVSKLGYSGTAIISRIKPLSVRYGLGISDHDTEGRLVTAEFDTF 391
IK++LIDGY NSFWTCSVSKLGYSGTAIISRIKPLSVRYGLGI DHD+EGRLVTAEFDTF
Sbjct: 300 IKQRLIDGYANSFWTCSVSKLGYSGTAIISRIKPLSVRYGLGIPDHDSEGRLVTAEFDTF 359
Query: 392 YLICGYIPNSGDGLKRLSYRVTQWDPSLSNYLKELEKTKPVVLTGDLNCAHEEIDIYNPA 451
YLICGY+PNSGDGLKRLSYRVT+WDPSLSNYLKELEK+KPV+LTGDLNCAHEEIDIYNPA
Sbjct: 360 YLICGYVPNSGDGLKRLSYRVTEWDPSLSNYLKELEKSKPVILTGDLNCAHEEIDIYNPA 419
Query: 452 GNKKSAGFTDEERKSFAANFLSRGFVDTFRRQHPDVVGYTYWGYRHGGRKTNRGWRLDYF 511
GNK+SAGFTDEERKSFA NFLSRGFVDTFRRQHP V+GYTYWGYRHGGRK NRGWRLDYF
Sbjct: 420 GNKRSAGFTDEERKSFAKNFLSRGFVDTFRRQHPGVIGYTYWGYRHGGRKFNRGWRLDYF 479
Query: 512 LVSESIADKVHDSYILPDVMGSDHCPVGLIIKL 544
LVSESIADKVHDSYILPDV GSDHCP+GL++KL
Sbjct: 480 LVSESIADKVHDSYILPDVTGSDHCPIGLVVKL 512
>Glyma10g16340.1
Length = 201
Score = 257 bits (656), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 121/142 (85%), Positives = 127/142 (89%), Gaps = 11/142 (7%)
Query: 363 IKPLSVRYGLGISDHDTEGRLVTAEFDTFYLICGYIPNSGDGLKRLSYRVTQWDPSLSNY 422
IKPLSVRYGLGISDHD+EGRLVTAEFDTFYLICGY SYRVT+WDPSLSNY
Sbjct: 62 IKPLSVRYGLGISDHDSEGRLVTAEFDTFYLICGY-----------SYRVTEWDPSLSNY 110
Query: 423 LKELEKTKPVVLTGDLNCAHEEIDIYNPAGNKKSAGFTDEERKSFAANFLSRGFVDTFRR 482
LKELEK+KPV+LTGDLNCAHEEIDIYNPAGNK+SAG TDEERKSFA NFLSRGFVDTFRR
Sbjct: 111 LKELEKSKPVILTGDLNCAHEEIDIYNPAGNKRSAGLTDEERKSFATNFLSRGFVDTFRR 170
Query: 483 QHPDVVGYTYWGYRHGGRKTNR 504
QHP V+GYTYWGYRHGGRK NR
Sbjct: 171 QHPGVIGYTYWGYRHGGRKFNR 192
>Glyma10g16370.1
Length = 129
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 98/123 (79%), Positives = 103/123 (83%), Gaps = 10/123 (8%)
Query: 240 DEISTTTIPTEPWTVLAHKKPQKDWIAYNPKTMRPQPLTRDTKFVKLLSWNVNGLRALLK 299
+EIST TI TEPWTVLAHKKPQK WIAYNP+TMRP PL +DTKFVKLLSWN NGLRALLK
Sbjct: 17 EEISTATIQTEPWTVLAHKKPQKGWIAYNPRTMRPPPLAQDTKFVKLLSWNANGLRALLK 76
Query: 300 LEGFSALELAQREDFDVLCLQETKLQEKDINEIKRQLIDGYENSFWTCSVSKLGYSGTAI 359
LEGFSAL+LAQREDFD EKDI EIK LIDGY+NSFWT SVSKLGYSGTAI
Sbjct: 77 LEGFSALQLAQREDFD----------EKDIEEIKHHLIDGYDNSFWTFSVSKLGYSGTAI 126
Query: 360 ISR 362
ISR
Sbjct: 127 ISR 129
>Glyma02g34660.1
Length = 131
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/149 (53%), Positives = 94/149 (63%), Gaps = 39/149 (26%)
Query: 260 PQKDWIAYNPKTMRPQPLTRDTKFVKLLSWNVNGLRALLKLEGFSALELAQREDFDVLCL 319
PQK WI+YNP+T+R PL ++TKFVKL NVNGLRALLKLEGF A++L+QREDFDV L
Sbjct: 1 PQKGWISYNPRTVRLPPLAQETKFVKLCPGNVNGLRALLKLEGFPAVQLSQREDFDVFLL 60
Query: 320 QETKLQEKDINEIKRQLIDGYENSFWTCSVSKLGYSGTAIISRIKPLSVRYGLGISDHDT 379
+++ SVRYGLGISDHD+
Sbjct: 61 VLLQIKLL---------------------------------------SVRYGLGISDHDS 81
Query: 380 EGRLVTAEFDTFYLICGYIPNSGDGLKRL 408
EGRLV+ EFDTFYLICGY+PNSGDGLKRL
Sbjct: 82 EGRLVSTEFDTFYLICGYVPNSGDGLKRL 110
>Glyma04g36610.2
Length = 355
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 143/310 (46%), Gaps = 57/310 (18%)
Query: 284 VKLLSWNVNGLRALLKLEGFSALELAQREDFDVLCLQETKLQE---KDINEIKRQLID-- 338
+K ++WN N +K L D D++ +QE ++ K ++I+ ++ D
Sbjct: 36 LKFMTWNANSFLLRVKNNWPDFTNLITTFDPDLIAIQEVRMPAAGAKGASKIQGEIKDDT 95
Query: 339 -------------------GYENSFWTCSVSKLGYSGTAIISR--IKPLSVRYGLG--IS 375
G + +W+ + SK Y+GTA++ + KP SV + L S
Sbjct: 96 SAAREEKKILTRALSAPPFGNYHVWWSLADSK--YAGTALLVKKCFKPKSVVFNLDKLAS 153
Query: 376 DHDTEGRLVTAEFDTFYLICGYIPNSGDGLKRLSY-RVTQWDPSLSNYLKELEKTKPVVL 434
H+ +GR++ EF+T L+ Y+PN+G + S+ R +WD + ++ + KP++
Sbjct: 154 KHEPDGRVILVEFETLRLLNTYVPNNGWKEEANSFQRRRKWDKRILEFVTQ-SSDKPLIW 212
Query: 435 TGDLNCAHEEIDIYNP------------AGNKKSA---GFTDEERKSFAANFLSRGFVDT 479
GDLN +HEEID+ +P NK+ GFT ERK F VD
Sbjct: 213 CGDLNVSHEEIDVSHPDFFSVAKLNGYIPPNKEDCGQPGFTLSERKRFGTILREGKLVDA 272
Query: 480 FRRQHPDV---VGYTYWGYRHGGRKTNRGWRLDYFLVSESIADKVHDSYI------LPDV 530
+R H D G++ W GR + R+DYFLVSE + +++ + L
Sbjct: 273 YRFLHEDKDMERGFS-WSGNPVGRYRGKRMRIDYFLVSEKLKERIAACEMRGHGIELEGF 331
Query: 531 MGSDHCPVGL 540
GSDHCPV L
Sbjct: 332 YGSDHCPVTL 341
>Glyma04g36610.1
Length = 355
Score = 107 bits (266), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 143/310 (46%), Gaps = 57/310 (18%)
Query: 284 VKLLSWNVNGLRALLKLEGFSALELAQREDFDVLCLQETKLQE---KDINEIKRQLID-- 338
+K ++WN N +K L D D++ +QE ++ K ++I+ ++ D
Sbjct: 36 LKFMTWNANSFLLRVKNNWPDFTNLITTFDPDLIAIQEVRMPAAGAKGASKIQGEIKDDT 95
Query: 339 -------------------GYENSFWTCSVSKLGYSGTAIISR--IKPLSVRYGLG--IS 375
G + +W+ + SK Y+GTA++ + KP SV + L S
Sbjct: 96 SAAREEKKILTRALSAPPFGNYHVWWSLADSK--YAGTALLVKKCFKPKSVVFNLDKLAS 153
Query: 376 DHDTEGRLVTAEFDTFYLICGYIPNSGDGLKRLSY-RVTQWDPSLSNYLKELEKTKPVVL 434
H+ +GR++ EF+T L+ Y+PN+G + S+ R +WD + ++ + KP++
Sbjct: 154 KHEPDGRVILVEFETLRLLNTYVPNNGWKEEANSFQRRRKWDKRILEFVTQ-SSDKPLIW 212
Query: 435 TGDLNCAHEEIDIYNP------------AGNKKSA---GFTDEERKSFAANFLSRGFVDT 479
GDLN +HEEID+ +P NK+ GFT ERK F VD
Sbjct: 213 CGDLNVSHEEIDVSHPDFFSVAKLNGYIPPNKEDCGQPGFTLSERKRFGTILREGKLVDA 272
Query: 480 FRRQHPDV---VGYTYWGYRHGGRKTNRGWRLDYFLVSESIADKVHDSYI------LPDV 530
+R H D G++ W GR + R+DYFLVSE + +++ + L
Sbjct: 273 YRFLHEDKDMERGFS-WSGNPVGRYRGKRMRIDYFLVSEKLKERIAACEMRGHGIELEGF 331
Query: 531 MGSDHCPVGL 540
GSDHCPV L
Sbjct: 332 YGSDHCPVTL 341
>Glyma10g16330.1
Length = 55
Score = 87.8 bits (216), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/40 (90%), Positives = 39/40 (97%)
Query: 505 GWRLDYFLVSESIADKVHDSYILPDVMGSDHCPVGLIIKL 544
GWRLDYFLVSESIADKVHDSYILPDV GSDHCP+GL++KL
Sbjct: 16 GWRLDYFLVSESIADKVHDSYILPDVTGSDHCPIGLVVKL 55
>Glyma02g05430.1
Length = 566
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 126/285 (44%), Gaps = 52/285 (18%)
Query: 284 VKLLSWNVNGLRALLKLEGFSALELAQREDFDVLCLQETKLQEKDINEIKRQLIDGYENS 343
+K++S+NVNGLR + G S L D D++C QETKL+ +++ + DGYE S
Sbjct: 1 MKIVSYNVNGLRQRIAQFG-SLRNLLNSFDADIICFQETKLRRQEVT-ADLVMADGYE-S 57
Query: 344 FWTCSVS----KLGYSGTAIISRIK----------PLSVRYG----LGISDH-------- 377
F++C+ + + GYSG R+K PL+ G LG S
Sbjct: 58 FFSCTRTSQKGRTGYSGVITFCRVKSAFSSNEVVLPLAAEEGFTGLLGNSQTSNDKLPFL 117
Query: 378 ---------------DTEGRLVTAEFDTFYLICGYIPNS-GDGLKRLSYRVTQWDPSLSN 421
D+EGR + + F L Y P + GD +R+ ++ +
Sbjct: 118 MEDLEEFSKDELLSLDSEGRCIITDHTHFVLFNLYGPRAGGDDTERIQFKQKFYRILQKR 177
Query: 422 YLKELEKTKPVVLTGDLNCAHEEIDIYNPAGNKKSAGFTDEERKSFAANFLSRG--FVDT 479
+ L + + + + GDLN A ID + + ++ +E RK F + + G F D
Sbjct: 178 WESLLHQGRRIFVVGDLNIAPFAIDRCDAGPDFEN----NEFRKWFKSMLIENGGRFSDV 233
Query: 480 FRRQHPDVV-GYTYWGYRHGGRKTNRGWRLDYFLVSESIADKVHD 523
FR +HPD YT W G N G R+D+ L + S ++ D
Sbjct: 234 FRAKHPDRREAYTCWSQNTGAEVFNFGSRIDHILFAGSCLHELDD 278
>Glyma16g23850.1
Length = 482
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 27/179 (15%)
Query: 284 VKLLSWNVNGLRALLKLEGFSALELAQREDFDVLCLQETKLQEKDINEIKRQLIDGYENS 343
+K++S+NVNGLR + G S L D D++C QET+L+ +++ + GYE S
Sbjct: 1 MKIVSYNVNGLRQRIAQFG-SLRNLLNSFDADIVCFQETELRRQEVTA-DLVMAGGYE-S 57
Query: 344 FWTCSVS----KLGYSGTAIISRIKP--------LSVRYGLGISDH----DTEGRLVTAE 387
F++C+ + + GYSG R+K L + G +D D+EGR + +
Sbjct: 58 FFSCTRTSQKGRTGYSGVITFCRVKSAFLSNEVVLQLAEKEGFTDELLSLDSEGRCIITD 117
Query: 388 FDTFYLICGYIPNSGDGLKRLSYRVTQWDPSLSNYLKELEKTKPVVLTGDLNCAHEEID 446
F GD +R+ ++ + + L + + + + DLN A ID
Sbjct: 118 HTHF--------AGGDDTERIQFKQIFYRILQKRWGSLLHQGRRIFVVVDLNIAPFAID 168