Miyakogusa Predicted Gene

Lj5g3v0845680.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0845680.1 Non Chatacterized Hit- tr|C6T2Q7|C6T2Q7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.32174 PE,64.56,2e-16,
,NODE_47039_length_881_cov_189.098755.path2.1
         (76 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g36230.1                                                        90   7e-19
Glyma19g38880.1                                                        61   3e-10

>Glyma03g36230.1 
          Length = 182

 Score = 89.7 bits (221), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 51/79 (64%), Positives = 58/79 (73%), Gaps = 8/79 (10%)

Query: 1   MERSLFGGVSRFFDAAEEMKNGFFDVFG---NVLDAESPSSSSMRRGIPIEEYNRQEASP 57
           MER+L  G+S FFDAA    NGFFDVF    ++ DAES SS S+RRGIPIEEY R EA P
Sbjct: 109 MERNLLSGLSHFFDAA----NGFFDVFSKSPSIFDAES-SSPSVRRGIPIEEYRRPEAYP 163

Query: 58  KPQEKEPVDTDFAALAKDV 76
           K +EKE  DTDF A+AKDV
Sbjct: 164 KSKEKESGDTDFVAMAKDV 182


>Glyma19g38880.1 
          Length = 135

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 38/60 (63%), Gaps = 3/60 (5%)

Query: 19  MKNGFFDVFGNV---LDAESPSSSSMRRGIPIEEYNRQEASPKPQEKEPVDTDFAALAKD 75
           +K GF   F ++    DAES S  S+RRGIPIEEY R E  PK  E E  DTDF A+AKD
Sbjct: 76  LKMGFLMFFLSLQASFDAESSSVPSVRRGIPIEEYRRPETYPKSNENESGDTDFVAMAKD 135