Miyakogusa Predicted Gene
- Lj5g3v0837720.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0837720.1 tr|G7K6A2|G7K6A2_MEDTR F-box/kelch-repeat protein
OS=Medicago truncatula GN=MTR_5g069760 PE=4 SV=1,40.32,2e-17,
,CUFF.54017.1
(125 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g04720.1 81 2e-16
Glyma08g29710.1 74 4e-14
Glyma19g06560.1 73 7e-14
Glyma19g06670.1 72 1e-13
Glyma08g24680.1 72 1e-13
Glyma08g46490.1 72 1e-13
Glyma19g06700.1 72 2e-13
Glyma19g06660.1 69 2e-12
Glyma08g14340.1 66 9e-12
Glyma15g10840.1 58 2e-09
Glyma08g46770.1 58 3e-09
Glyma13g28210.1 56 8e-09
Glyma10g36430.1 56 1e-08
Glyma20g18420.2 54 3e-08
Glyma20g18420.1 54 3e-08
Glyma18g33960.1 50 4e-07
Glyma05g06310.1 50 6e-07
Glyma18g34080.1 49 8e-07
Glyma08g46730.1 49 9e-07
Glyma0146s00210.1 49 1e-06
Glyma18g33950.1 48 2e-06
Glyma18g33890.1 47 6e-06
Glyma18g33990.1 47 7e-06
>Glyma02g04720.1
Length = 423
Score = 81.3 bits (199), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 62/104 (59%), Gaps = 9/104 (8%)
Query: 30 YDRKTGNLVVWQMKEFGVHKSWTQLLNIIFYG----KFSQWPYFPMCMSDNGDALLLQDY 85
+D + NLVVW M+EFG KSWTQLLN+ ++ F P P+C S+N D LLL+DY
Sbjct: 317 HDHRRTNLVVWLMREFGAEKSWTQLLNVSYHHLQVLDFPPCPVVPLCKSENDDVLLLEDY 376
Query: 86 -CGSQAVLYTLKDNKIES----TMISSSIAGFYLNDYIESLVSP 124
G++ VL +DN I+ SS + F +DY++SLV P
Sbjct: 377 GGGAEFVLVDKRDNSIDRMEGFNNGLSSFSAFVSHDYVQSLVLP 420
>Glyma08g29710.1
Length = 393
Score = 73.6 bits (179), Expect = 4e-14, Method: Composition-based stats.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 7/102 (6%)
Query: 30 YDRKTGNLVVWQMKEFGVHKSWTQLLNIIF--YGKFSQWPYF----PMCMSDNGDALLLQ 83
+D++ + VVW +EFGV +SWT+LLN+ + + PY+ P+CMS+N D LLL
Sbjct: 289 HDQRRTHFVVWLTREFGVERSWTRLLNVSYEHFRNHGCPPYYRFVTPLCMSENEDVLLLA 348
Query: 84 DYCGSQAVLYTLKDNKIESTM-ISSSIAGFYLNDYIESLVSP 124
+ GS+ V Y L+DN+I+ S F +DY+ SLV P
Sbjct: 349 NDEGSEFVFYNLRDNRIDRIQDFDSYKFSFLSHDYVPSLVLP 390
>Glyma19g06560.1
Length = 339
Score = 72.8 bits (177), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
Query: 11 EQFKFPLFPVCVLEELQFMYDRKTGNLVVWQMKEFGVHKSWTQLLNIIFYGKFSQWPYF- 69
E FK+ L P L ++ + + VVW M+EFGV SWTQLLN+ + P
Sbjct: 227 ETFKYLLMPNG-LSQVPRGPELGRTHFVVWLMREFGVENSWTQLLNVTLELLQAPLPCVI 285
Query: 70 --PMCMSDNGDALLLQDYCGSQAVLYTLKDNKIESTMISSSIAGFYLNDYIESL 121
P+C+S+NGD LLL +Y S+ +LY KDN+I T ++ +DYI+SL
Sbjct: 286 LKPLCISENGDVLLLANYISSKFILYNKKDNRIVYTQDFNNQVPMSSHDYIQSL 339
>Glyma19g06670.1
Length = 385
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 10/99 (10%)
Query: 32 RKTGNLVVWQMKEFGVHKSWTQLLNIIFYGKFSQWPYFP------MCMSDNGDALLLQDY 85
R+T + VVW M+EFGV SWTQLLN+ + Q P P +C+S+NGD LLL +Y
Sbjct: 288 RRT-HFVVWLMREFGVENSWTQLLNVTL--ELLQAP-LPCVILKLLCISENGDVLLLANY 343
Query: 86 CGSQAVLYTLKDNKIESTMISSSIAGFYLNDYIESLVSP 124
S+ +LY KDN+I T ++ +DYI+SLV P
Sbjct: 344 ISSKFILYNKKDNRIVYTQDFNNQVPMSSHDYIQSLVLP 382
>Glyma08g24680.1
Length = 387
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 31 DRKTGNLVVWQMKEFGVHKSWTQLLNIIFYGKFSQWPYFPMCMSDNGDALLLQDYCGSQA 90
D + VVW M+EFGV SWT+LLN+ + + P+CMS + D +LL Y G++
Sbjct: 293 DHMKTHCVVWLMREFGVENSWTKLLNVNYEQLLNH--DRPLCMSQDEDVVLLTSYAGARF 350
Query: 91 VLYTLKDNKIESTMISSSIAGFYLNDYIESLVSP 124
VLY + N+ E + FY DY++SLVSP
Sbjct: 351 VLYNRRYNRSERMEHFKNKFSFYCYDYVQSLVSP 384
>Glyma08g46490.1
Length = 395
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 8/111 (7%)
Query: 20 VCVLEELQFMYDRKTGNLVVWQMKEFGVHKSWTQLLNIIFYGKFSQWPY------FPMCM 73
V + + L +DR + VVWQMKEFGV KSWT L+ + + Q PY P C+
Sbjct: 284 VELRDRLCLYHDRNATHFVVWQMKEFGVEKSWTLLMKVTY--NHLQIPYPPDRPLLPFCI 341
Query: 74 SDNGDALLLQDYCGSQAVLYTLKDNKIESTMISSSIAGFYLNDYIESLVSP 124
S+NG+ L+L + Y ++N++E I ++ A + +YI SLVSP
Sbjct: 342 SENGEVLMLVNNDVLNMTFYNRRNNRVEVIPIPNNNAWWQATNYIPSLVSP 392
>Glyma19g06700.1
Length = 364
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 60/99 (60%), Gaps = 10/99 (10%)
Query: 32 RKTGNLVVWQMKEFGVHKSWTQLLNIIFYGKFSQWPYFP------MCMSDNGDALLLQDY 85
R+T + VVW M+EFGV SWTQLLN+ + Q P P +C+S+NGD LLL +Y
Sbjct: 267 RRT-HFVVWLMREFGVENSWTQLLNVTL--ELLQAP-LPCVILKLLCISENGDVLLLANY 322
Query: 86 CGSQAVLYTLKDNKIESTMISSSIAGFYLNDYIESLVSP 124
S+ +LY KDN+I T ++ +DYI+SLV P
Sbjct: 323 ISSKFILYNKKDNRIVYTQDFNNQVPMSSHDYIQSLVLP 361
>Glyma19g06660.1
Length = 322
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 32 RKTGNLVVWQMKEFGVHKSWTQLLNIIFYGKFSQWPYF---PMCMSDNGDALLLQDYCGS 88
R+T + VVW M+EFGV SWTQLLN+ + P P+C+S+NGD LLL +Y S
Sbjct: 252 RRT-HFVVWLMREFGVENSWTQLLNVTLELLQAHLPCVILKPLCISENGDVLLLANYISS 310
Query: 89 QAVLYTLKDNKI 100
+ +LY KDN+I
Sbjct: 311 KFILYNKKDNRI 322
>Glyma08g14340.1
Length = 372
Score = 65.9 bits (159), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 25 ELQFMYDRKTGNLVVWQMKEFGVHKSWTQLLNIIFY-------GKFSQWPYFPMCMSDNG 77
L + + R+T + VVW M++FGV KSWT+LLN+ + + P P+C+S+N
Sbjct: 264 SLSYTHRRRT-HFVVWLMRQFGVEKSWTRLLNVSYLNFQLSPTNELDWLPTTPLCISEND 322
Query: 78 DALLLQDYCGSQAVLYTLKDNKIESTMISSSIAGFYLNDYIESLVSP 124
D +LL + + VL+ +DN+I+S DY+ SLV P
Sbjct: 323 DMMLLANCVYDEFVLHNRRDNRIDSIGSFDGKVPMCSYDYVPSLVLP 369
>Glyma15g10840.1
Length = 405
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 30 YDRKTGNLVVWQMKEFGVHKSWTQLLNIIFYGKFSQWPYF-PMCMSDNGDALLLQDYCGS 88
YD K + VVW MK++G +SW +L++I + + Y P +S+NG+ LL+ ++
Sbjct: 310 YDYKKTHFVVWMMKDYGARESWVKLVSIPYVPNPENFSYSGPYYISENGEVLLMFEF--- 366
Query: 89 QAVLYTLKDNKIESTMISSSIAGFYLNDYIESLVSP 124
+LY +DN + I S F Y+E+LVSP
Sbjct: 367 DLILYNPRDNSFKYPKIESGKGWFDAEVYVETLVSP 402
>Glyma08g46770.1
Length = 377
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 31 DRKTGNLVVWQMKEFGVHKSWTQLLNIIF-YGKFSQWPY-----FPMCMSDNGDALLLQD 84
D + VVW M+EFGV KSWTQLLN+ + + + Q+P+ P+CMS++ D +LL
Sbjct: 283 DHGRTHFVVWLMREFGVEKSWTQLLNVSYEHLQLDQFPFPSTSMIPLCMSEDEDVMLLAS 342
Query: 85 YCGSQAVLYTLKDNKIESTMI 105
Y + VL ++ + + MI
Sbjct: 343 YGRKEFVLVSMVNIIGRTPMI 363
>Glyma13g28210.1
Length = 406
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 4/96 (4%)
Query: 30 YDRKTGNLVVWQMKEFGVHKSWTQLLNIIFYGKFSQWPYF-PMCMSDNGDALLLQDYCGS 88
YD K + VVW MK++GV +SW +L++I + + Y P +S+NG LL+ ++
Sbjct: 311 YDYKKTHFVVWMMKDYGVRESWVKLVSIPYVPNPEDFSYSGPYYISENGKVLLMFEF--- 367
Query: 89 QAVLYTLKDNKIESTMISSSIAGFYLNDYIESLVSP 124
+LY ++N + I S F Y+E+LVSP
Sbjct: 368 DLILYDPRNNSFKYPKIESGKGWFDAEVYVETLVSP 403
>Glyma10g36430.1
Length = 343
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
Query: 31 DRKTGNLVVWQMKEFGVHKSWTQLLNIIFYG-KFSQWPYF--PMCMSDNGDALLLQDYCG 87
D + G+ +VW MKE+GV SWT+L+ I + +W + P+C+S+NG +LL
Sbjct: 253 DCRKGHWIVWLMKEYGVPNSWTKLVTIPYIKLGICRWSHLFVPLCISENG--VLLLKTTS 310
Query: 88 SQAVLYTLKDNKIESTMISSSIAGFYLNDYIESL 121
S+ V+Y L D +++ I + GF ++ Y ESL
Sbjct: 311 SKLVIYNLNDGRMDYLRIVDEL-GFDIHVYHESL 343
>Glyma20g18420.2
Length = 390
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 40 WQMKEFGVHKSWTQLLNIIF-----YGKFSQWPYFPMCMSDNGDALLLQDYCGSQAVLYT 94
W MKEFGV KSWT+ LNI + +G F P +CMS++ +LL++ + +LY
Sbjct: 300 WLMKEFGVEKSWTRFLNISYDQLHIHGGFLDHPVI-LCMSEDDGVVLLENGGHGKFILYN 358
Query: 95 LKDNKIES-TMISSSIAGFYLNDYIESLVSP 124
+DN IE + F DY +S V P
Sbjct: 359 KRDNTIECYGELDKGRFQFLSYDYAQSFVMP 389
>Glyma20g18420.1
Length = 390
Score = 54.3 bits (129), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 40 WQMKEFGVHKSWTQLLNIIF-----YGKFSQWPYFPMCMSDNGDALLLQDYCGSQAVLYT 94
W MKEFGV KSWT+ LNI + +G F P +CMS++ +LL++ + +LY
Sbjct: 300 WLMKEFGVEKSWTRFLNISYDQLHIHGGFLDHPVI-LCMSEDDGVVLLENGGHGKFILYN 358
Query: 95 LKDNKIES-TMISSSIAGFYLNDYIESLVSP 124
+DN IE + F DY +S V P
Sbjct: 359 KRDNTIECYGELDKGRFQFLSYDYAQSFVMP 389
>Glyma18g33960.1
Length = 274
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 11/82 (13%)
Query: 36 NLVVWQMKEFGVHKSWTQLLNIIFYGKFSQWPY------FPMCMSDNGDALLLQDYCGS- 88
NL +WQM++FG KSW QL+N Y + PY P+CMS+NGD +L+ +
Sbjct: 176 NLGLWQMRKFGDDKSWIQLIN-FSYLHLNICPYEEKSMILPLCMSNNGDFFMLKFTRNAD 234
Query: 89 ---QAVLYTLKDNKIESTMISS 107
Q +LY +D K + +++ S
Sbjct: 235 DEYQTILYNQRDGKSQVSVVPS 256
>Glyma05g06310.1
Length = 309
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 31 DRKTGNLVVWQMKEFGVHKSWTQLLNIIF-YGKFSQWPY-----FPMCMSDNGDALLLQD 84
D + VVW M+EFGV KSWTQLLN+ + + + Q+ + P+ MS++ D +LL
Sbjct: 242 DHGRTHFVVWLMREFGVEKSWTQLLNVSYEHLQLDQFSFPSTLMIPLFMSEDEDVMLLAS 301
Query: 85 YCGSQAVL 92
Y + VL
Sbjct: 302 YGRKEFVL 309
>Glyma18g34080.1
Length = 284
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 10/76 (13%)
Query: 36 NLVVWQMKEFGVHKSWTQLLNIIFYGKFSQWPYFPMCMSDNGDALLLQDYCGS----QAV 91
+L +WQM++FG KSW QL+N F + P CMS+NGD +L+ + Q +
Sbjct: 188 HLGLWQMRKFGDDKSWIQLIN------FKKSMILPFCMSNNGDFFMLKFTRNADDEYQTI 241
Query: 92 LYTLKDNKIESTMISS 107
LY +D K + +++ S
Sbjct: 242 LYNQRDGKSQVSVVPS 257
>Glyma08g46730.1
Length = 385
Score = 49.3 bits (116), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 15/119 (12%)
Query: 20 VCVLEELQFMYDRKTGNLVVWQMKEFGVHKSWTQLLNIIFYGKFSQWPY------FPMCM 73
+ V +L ++ +L +WQM++FG KSW QL+N Y + PY P+CM
Sbjct: 267 IGVFRDLLCVWQDSNTHLGLWQMRKFGDDKSWIQLIN-FSYLHLNIRPYEEKSMILPLCM 325
Query: 74 SDNGDALLLQDYCGS----QAVLYTLKDNKIESTMISS----SIAGFYLNDYIESLVSP 124
S+NGD +L+ + Q +LY D K + +++ S ++ L + +SLV P
Sbjct: 326 SNNGDFFMLKFTRNADDEYQTILYNQGDGKSQVSVVPSYSFRTMLRRNLKIFTKSLVIP 384
>Glyma0146s00210.1
Length = 367
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 16/103 (15%)
Query: 20 VCVLEELQFMYDRKTGNLVVWQMKEFGVHKSWTQLLNIIFYGKFSQWPY------FPMCM 73
+ V+ +L ++ +L VWQM++FG KSW QL+N Y + PY P+CM
Sbjct: 267 IGVVRDLLCVWQDSNTHLGVWQMRKFGDDKSWIQLIN-FSYLHLNIRPYEEKSMILPLCM 325
Query: 74 SDNGDALLLQDYCGSQAVLYTLKDNKIESTMISSSIAGFYLND 116
S+NGD +L+ +T + T++ + + GF L+D
Sbjct: 326 SNNGDFFMLK---------FTRNADDEYQTILYNQMDGFILSD 359
>Glyma18g33950.1
Length = 375
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 34 TGNLVVWQMKEFGVHKSWTQLLNIIFYGKFSQWPY------FPMCMSDNGDALLLQDYCG 87
+L +WQM++FG KSW QL+N Y + PY P+CMS+NGD +L+
Sbjct: 256 NAHLGLWQMRKFGEDKSWIQLINFS-YLHLNIRPYEEKSMILPLCMSNNGDFFMLKFTRN 314
Query: 88 S----QAVLYTLKDNKIESTMISS 107
+ Q +LY D K + +++ S
Sbjct: 315 ADDEYQTILYNQGDGKSQVSVVPS 338
>Glyma18g33890.1
Length = 385
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 11/84 (13%)
Query: 34 TGNLVVWQMKEFGVHKSWTQLLNIIFYGKFSQWPY------FPMCMSDNGDALLLQDYCG 87
+L +WQM+ FG KSW QL+N Y + PY P+CMS+NGD +L+
Sbjct: 281 NAHLGLWQMRRFGDDKSWIQLINFS-YLHLNIRPYEEKSMILPLCMSNNGDFFMLKFTRN 339
Query: 88 S----QAVLYTLKDNKIESTMISS 107
+ Q +LY D K +++ S
Sbjct: 340 ADDEYQTILYNQGDGKSPVSVVPS 363
>Glyma18g33990.1
Length = 352
Score = 46.6 bits (109), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 11/82 (13%)
Query: 36 NLVVWQMKEFGVHKSWTQLLNIIFYGKFSQWPY------FPMCMSDNGDALLLQDYCGS- 88
+L +WQM++FG KSW +L+N Y + PY P+CMS+NGD +L+ +
Sbjct: 250 HLGLWQMRKFGDDKSWIKLIN-FSYLHLNIRPYEEKSMILPLCMSNNGDFFMLKFTRNAN 308
Query: 89 ---QAVLYTLKDNKIESTMISS 107
Q +LY D K + ++I S
Sbjct: 309 DEYQTILYNEGDGKSQVSVIPS 330