Miyakogusa Predicted Gene
- Lj5g3v0709830.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0709830.3 Non Chatacterized Hit- tr|B9FEM7|B9FEM7_ORYSJ
Putative uncharacterized protein OS=Oryza sativa subsp,41.88,5e-18,no
description,DNA glycosylase; ENDONUCLEASE III-RELATED,NULL;
A/G-SPECIFIC ADENINE GLYCOSYLASE/ENDO,CUFF.53869.3
(599 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma13g21460.1 634 0.0
Glyma03g34860.2 535 e-152
Glyma03g34860.1 534 e-151
Glyma20g32960.1 201 3e-51
Glyma10g34600.1 196 6e-50
Glyma12g30640.1 93 1e-18
Glyma15g30630.1 82 2e-15
Glyma05g01820.1 57 6e-08
>Glyma13g21460.1
Length = 1569
Score = 634 bits (1635), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/637 (58%), Positives = 430/637 (67%), Gaps = 99/637 (15%)
Query: 26 KRNRKKGNPSSSAYPSTSEILQNYNLALTNHFLPLGKSSDV----------DIEALAEQF 75
KRNRKK PSSSA+ +T+E+LQN+N L N+ LP+GK SD+ +I+AL QF
Sbjct: 494 KRNRKKSVPSSSAHSTTNEMLQNHNFTLENYPLPMGKPSDIVPEVLWNTMNNIDALTLQF 553
Query: 76 RQLNISTD--------QHALVPF--QGSFI-----------KKHHPRPKVDLDEETDKVW 114
RQLN++T+ Q+ALVP+ Q S I KK H RPKVDLD+ETD+VW
Sbjct: 554 RQLNLNTEVRDLAFHEQNALVPYKQQNSLIHGDGVIVPFHIKKQHLRPKVDLDDETDRVW 613
Query: 115 KLLMLDINSHGVDGTDEDKAKWWEEERNVFRGRADSFIARMHLVQGDRRFSRWKGSVVDS 174
KLL+LDINSHG+DGTDEDKAKWWEEERNVFRGRADSFIARMHLVQGDRRFSRWKGSVVDS
Sbjct: 614 KLLLLDINSHGIDGTDEDKAKWWEEERNVFRGRADSFIARMHLVQGDRRFSRWKGSVVDS 673
Query: 175 VVGVFLTQNVSDHLSSSAYMSLAARFPPKPSSMRKTCHGEGTSLEVNEPQVQIVEPEENT 234
VVGVFLTQNV+DHLSSSA+MSLAARFP SSM KT H E T L VN+PQV IVEPEE+T
Sbjct: 674 VVGVFLTQNVTDHLSSSAFMSLAARFPKISSSMCKTHHAEDTRLVVNKPQVHIVEPEEST 733
Query: 235 ECDVKLLNQSLHDQSFTTIDIAKHSGEKEAVESNDSCRITSSV---TDESNCRLPDSSQR 291
E DVKLLNQS++DQ TIDI +HS EKEA SN+SC TSSV TDESN R
Sbjct: 734 EWDVKLLNQSVYDQPSPTIDIVEHSREKEAFNSNESCGTTSSVISLTDESNSRF------ 787
Query: 292 NIKEHQSPMRSGLISTSIEELEDKSCYDSAGLEXX-XXXXXXXXXXXXXXGDFSNDQNPE 350
SIEE E+KSCYD E GDFSNDQNPE
Sbjct: 788 ---------------ASIEEGEEKSCYDGDRKELNDIVSSQGSVISSQISGDFSNDQNPE 832
Query: 351 KIGSSSDSNSEIEDLSSTAMYNSVYSGTSFSKLLEIVSSTKFHEVNSEKSPTEPNT---- 406
KIGS SDSNSE+E ++N TSFSKLLE+VSSTKF+ NS+KS + N
Sbjct: 833 KIGSCSDSNSEVE------VFN-----TSFSKLLEMVSSTKFYADNSQKSESIENLRDAY 881
Query: 407 -AQIALGHSQTIASQVYPQEQSSHMQQSFFN---ISEQTQDLVNKE-------------- 448
I H+ TI S ++S + + F+ T D + K+
Sbjct: 882 DQHIHRQHNNTIES----LKKSRMLDVNCFDPFKTEASTSDFLKKKDENSMNRSSLQTTE 937
Query: 449 ------RGLDLGDHKDTARSETNEISSTPITLKSXXXXXXXXXXVDWDSLRLTAQAKAGK 502
RG DLG+ K+ R+ TNEISS PI KS DWDSLR+ AQAKAGK
Sbjct: 938 PGGQKGRGSDLGEQKNAMRNGTNEISSAPIKFKSKEQEKEKKDDFDWDSLRIEAQAKAGK 997
Query: 503 RERTENTMDTLDWDAVRCADVNEIANTIKERGMNNRLAERIQGFLNRLVEKHGSIDLEWL 562
RE+T+NTMD+LDWDAVRCADV+EIA TIKERGMNNRLA+RI+ FLNRLVE+HGSIDLEWL
Sbjct: 998 REKTDNTMDSLDWDAVRCADVSEIAETIKERGMNNRLADRIKNFLNRLVEEHGSIDLEWL 1057
Query: 563 RDVPPDQAKEYLLSFRGLGLKSVECVRLLTLHHLAFP 599
RDVPPD+AKEYLLS RGLGLKSVECVRLLTLHHLAFP
Sbjct: 1058 RDVPPDKAKEYLLSIRGLGLKSVECVRLLTLHHLAFP 1094
>Glyma03g34860.2
Length = 1285
Score = 535 bits (1377), Expect = e-152, Method: Compositional matrix adjust.
Identities = 315/636 (49%), Positives = 389/636 (61%), Gaps = 111/636 (17%)
Query: 26 KRNRKKGNPSSSAYPSTSEILQNYNLALTNHFL-----PLGKSS-DV-----DIEALAEQ 74
KR RK+ P +S Y T+E+ Q++ + L NH + LG + D+ ++ L EQ
Sbjct: 294 KRTRKRSIPVNSKYSCTNEMQQHHKVVLENHSISHSHNALGVACEDIWKNIHTVDTLTEQ 353
Query: 75 FRQLNISTDQHALV----------------------------PFQGSF--IKKHHPRPKV 104
F +LNI + +V PF+G F I+K PRPKV
Sbjct: 354 FERLNIYREAREIVLHGQNMLVPYNQQNQKNKRLVHEYGTIIPFEGPFDPIRKQRPRPKV 413
Query: 105 DLDEETDKVWKLLMLDINSHGVDGTDEDKAKWWEEERNVFRGRADSFIARMHLVQGDRRF 164
DLDEET++VWKLLMLDINSHG++GTDEDKAKWWE+ERNVFRGRA+SFIARMHLVQGDRRF
Sbjct: 414 DLDEETNRVWKLLMLDINSHGINGTDEDKAKWWEDERNVFRGRAESFIARMHLVQGDRRF 473
Query: 165 SRWKGSVVDSVVGVFLTQNVSDHLSSSAYMSLAARFPPKPSSMRKTCHGEGTSLEVNEPQ 224
S WKGSVVDSV+GVFLTQNVSDHLSSSA+MSLAARFP + SS KTC E TSL +NEPQ
Sbjct: 474 SPWKGSVVDSVIGVFLTQNVSDHLSSSAFMSLAARFPLRSSSNYKTCPEESTSLVINEPQ 533
Query: 225 VQIVEPEENTECDVKLLNQSLHDQSFTTIDIAKHSGEKEAVESNDSCRITSSVTDESNCR 284
V IVEPEEN + D K+ +QS++ ESN +
Sbjct: 534 VIIVEPEENEKLDEKISDQSVY---------------------------------ESNSK 560
Query: 285 LPDSSQRNIKEHQSPMRSGLISTSIEELEDKSCYDSAGLEXXXXXXXXXXXXXX--XXGD 342
L +S+QR+ EH SP+ SG IS E C+ S G E D
Sbjct: 561 LLESAQRHNSEH-SPVESGAISAVTGEGPKNLCHGSLGKEISFSELLEMASSTMLHESID 619
Query: 343 FSNDQNPEKIGSSSDSNSEIEDLSSTAMYNSVYSGTSF-----SKLLEI----------- 386
+D E N E D++ + + +G +F S +LE+
Sbjct: 620 MKHDNLAE--------NLEKSDVTQGSAEAPITNGYTFKITPNSGVLEVNCYDPLKIEVP 671
Query: 387 -VSSTKFHEVNSEKS--PTEPNTAQIALGHSQTIASQVYPQEQSSHMQQSFFNISEQTQD 443
S+K + N +S PTE + Q A+ HSQ + SQ +PQ+QS+H Q + F+IS QT+D
Sbjct: 672 SSGSSKGKDENDNRSSFPTESD-CQAAIVHSQGMLSQSHPQQQSNHEQHNVFHISGQTED 730
Query: 444 LVNKERGLDLGDHKDTARSETNEISSTPITLKSXXXXXXXXXXVDWDSLRLTAQAKAGKR 503
+ K RGLD G R+E+++I S+P+ L+S DWDSLR+ A+AKAGKR
Sbjct: 731 PMQKARGLDFG------RNESSKIDSSPVKLRSREHGKEKKNNFDWDSLRIQAEAKAGKR 784
Query: 504 ERTENTMDTLDWDAVRCADVNEIANTIKERGMNNRLAERIQGFLNRLVEKHGSIDLEWLR 563
E+TENTMD+LDWDAVR ADV+EIAN IKERGMNN LAERIQ FLN LV+KHG IDLEWLR
Sbjct: 785 EKTENTMDSLDWDAVRRADVSEIANAIKERGMNNMLAERIQSFLNLLVDKHGGIDLEWLR 844
Query: 564 DVPPDQAKEYLLSFRGLGLKSVECVRLLTLHHLAFP 599
DVPPDQAKE+LLS RGLGLKSVECVRLLTLHHLAFP
Sbjct: 845 DVPPDQAKEFLLSIRGLGLKSVECVRLLTLHHLAFP 880
>Glyma03g34860.1
Length = 1351
Score = 534 bits (1375), Expect = e-151, Method: Compositional matrix adjust.
Identities = 315/636 (49%), Positives = 389/636 (61%), Gaps = 111/636 (17%)
Query: 26 KRNRKKGNPSSSAYPSTSEILQNYNLALTNHFL-----PLGKSS-DV-----DIEALAEQ 74
KR RK+ P +S Y T+E+ Q++ + L NH + LG + D+ ++ L EQ
Sbjct: 294 KRTRKRSIPVNSKYSCTNEMQQHHKVVLENHSISHSHNALGVACEDIWKNIHTVDTLTEQ 353
Query: 75 FRQLNISTDQHALV----------------------------PFQGSF--IKKHHPRPKV 104
F +LNI + +V PF+G F I+K PRPKV
Sbjct: 354 FERLNIYREAREIVLHGQNMLVPYNQQNQKNKRLVHEYGTIIPFEGPFDPIRKQRPRPKV 413
Query: 105 DLDEETDKVWKLLMLDINSHGVDGTDEDKAKWWEEERNVFRGRADSFIARMHLVQGDRRF 164
DLDEET++VWKLLMLDINSHG++GTDEDKAKWWE+ERNVFRGRA+SFIARMHLVQGDRRF
Sbjct: 414 DLDEETNRVWKLLMLDINSHGINGTDEDKAKWWEDERNVFRGRAESFIARMHLVQGDRRF 473
Query: 165 SRWKGSVVDSVVGVFLTQNVSDHLSSSAYMSLAARFPPKPSSMRKTCHGEGTSLEVNEPQ 224
S WKGSVVDSV+GVFLTQNVSDHLSSSA+MSLAARFP + SS KTC E TSL +NEPQ
Sbjct: 474 SPWKGSVVDSVIGVFLTQNVSDHLSSSAFMSLAARFPLRSSSNYKTCPEESTSLVINEPQ 533
Query: 225 VQIVEPEENTECDVKLLNQSLHDQSFTTIDIAKHSGEKEAVESNDSCRITSSVTDESNCR 284
V IVEPEEN + D K+ +QS++ ESN +
Sbjct: 534 VIIVEPEENEKLDEKISDQSVY---------------------------------ESNSK 560
Query: 285 LPDSSQRNIKEHQSPMRSGLISTSIEELEDKSCYDSAGLEXXXXXXXXXXXXXX--XXGD 342
L +S+QR+ EH SP+ SG IS E C+ S G E D
Sbjct: 561 LLESAQRHNSEH-SPVESGAISAVTGEGPKNLCHGSLGKEISFSELLEMASSTMLHESID 619
Query: 343 FSNDQNPEKIGSSSDSNSEIEDLSSTAMYNSVYSGTSF-----SKLLEI----------- 386
+D E N E D++ + + +G +F S +LE+
Sbjct: 620 MKHDNLAE--------NLEKSDVTQGSAEAPITNGYTFKITPNSGVLEVNCYDPLKIEVP 671
Query: 387 -VSSTKFHEVNSEKS--PTEPNTAQIALGHSQTIASQVYPQEQSSHMQQSFFNISEQTQD 443
S+K + N +S PTE + Q A+ HSQ + SQ +PQ+QS+H Q + F+IS QT+D
Sbjct: 672 SSGSSKGKDENDNRSSFPTESD-CQAAIVHSQGMLSQSHPQQQSNHEQHNVFHISGQTED 730
Query: 444 LVNKERGLDLGDHKDTARSETNEISSTPITLKSXXXXXXXXXXVDWDSLRLTAQAKAGKR 503
+ K RGLD G R+E+++I S+P+ L+S DWDSLR+ A+AKAGKR
Sbjct: 731 PMQKARGLDFG------RNESSKIDSSPVKLRSREHGKEKKNNFDWDSLRIQAEAKAGKR 784
Query: 504 ERTENTMDTLDWDAVRCADVNEIANTIKERGMNNRLAERIQGFLNRLVEKHGSIDLEWLR 563
E+TENTMD+LDWDAVR ADV+EIAN IKERGMNN LAERIQ FLN LV+KHG IDLEWLR
Sbjct: 785 EKTENTMDSLDWDAVRRADVSEIANAIKERGMNNMLAERIQSFLNLLVDKHGGIDLEWLR 844
Query: 564 DVPPDQAKEYLLSFRGLGLKSVECVRLLTLHHLAFP 599
DVPPDQAKE+LLS RGLGLKSVECVRLLTLHHLAFP
Sbjct: 845 DVPPDQAKEFLLSIRGLGLKSVECVRLLTLHHLAFP 880
>Glyma20g32960.1
Length = 1645
Score = 201 bits (510), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 125/180 (69%), Gaps = 12/180 (6%)
Query: 84 QHALVPFQG----------SFIKKHHPRPKVDLDEETDKVWKLLMLDINSHGVDGTDEDK 133
Q ALVP+ G +KKH PRPKVDLD ET++ WKLLM S G++GTD++K
Sbjct: 583 QKALVPYNGDRSVVPYQEFELLKKHKPRPKVDLDAETERTWKLLMGKGGSEGLEGTDKEK 642
Query: 134 AKWWEEERNVFRGRADSFIARMHLVQGDRRFSRWKGSVVDSVVGVFLTQNVSDHLSSSAY 193
KWW+EERNVF GR DSFIARMHL+QGDRRFS+WKGSVVDSV+GVFLTQNVSDHLSSSA+
Sbjct: 643 EKWWDEERNVFHGRVDSFIARMHLIQGDRRFSKWKGSVVDSVIGVFLTQNVSDHLSSSAF 702
Query: 194 MSLAARFPPKPSSMRKTCHGEGTSLEVNEPQVQIVEPEEN-TECDVKLLNQSLHDQSFTT 252
MSLA+RFP + S +K+ + +L + E + IV P + T LNQ + F T
Sbjct: 703 MSLASRFPLQSKSSKKSYDVDTNTL-LKEAGLCIVNPADTITPYGSGTLNQPTYHLCFET 761
Score = 179 bits (453), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 81/112 (72%), Positives = 95/112 (84%)
Query: 488 DWDSLRLTAQAKAGKRERTENTMDTLDWDAVRCADVNEIANTIKERGMNNRLAERIQGFL 547
DWD LR Q ++ER+ +TMD+LD++A+RCA V EI+ TIKERGMNN LAERI+ FL
Sbjct: 1068 DWDKLRKEVQINRIEKERSTDTMDSLDYEAIRCASVKEISKTIKERGMNNMLAERIKEFL 1127
Query: 548 NRLVEKHGSIDLEWLRDVPPDQAKEYLLSFRGLGLKSVECVRLLTLHHLAFP 599
NRLV +HGSIDLEWLR VP D+AK+YLLSFRGLGLKSVECVRLLTLHH+AFP
Sbjct: 1128 NRLVTEHGSIDLEWLRHVPQDKAKDYLLSFRGLGLKSVECVRLLTLHHIAFP 1179
>Glyma10g34600.1
Length = 1100
Score = 196 bits (498), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 101/183 (55%), Positives = 125/183 (68%), Gaps = 12/183 (6%)
Query: 86 ALVPFQG----------SFIKKHHPRPKVDLDEETDKVWKLLMLDINSHGVDGTDEDKAK 135
ALVP+ G +KKH PRPKVDLD ET++ WKLLM + S G++ TD++K K
Sbjct: 171 ALVPYNGDRSVVPYQEFELLKKHKPRPKVDLDAETERTWKLLMGKVGSEGLEETDKEKEK 230
Query: 136 WWEEERNVFRGRADSFIARMHLVQGDRRFSRWKGSVVDSVVGVFLTQNVSDHLSSSAYMS 195
WW++ERNVF GR DSFIARMHL+QGDRRFS+WKGSVVDSV+GVFLTQNVSDHLSSSA+MS
Sbjct: 231 WWDKERNVFHGRVDSFIARMHLIQGDRRFSKWKGSVVDSVIGVFLTQNVSDHLSSSAFMS 290
Query: 196 LAARFPPKPSSMRKTCHGEGTSLEVNEPQVQIVEPEEN-TECDVKLLNQSLHDQSFTTID 254
LA+RFP + S +KT + +L E + I+ P + T LNQ + F T
Sbjct: 291 LASRFPLQSKSSKKTYDVDTNTL-FKEAGLNILNPADTITSYGYGTLNQPTYHLGFETPH 349
Query: 255 IAK 257
AK
Sbjct: 350 HAK 352
Score = 169 bits (429), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 78/112 (69%), Positives = 94/112 (83%)
Query: 488 DWDSLRLTAQAKAGKRERTENTMDTLDWDAVRCADVNEIANTIKERGMNNRLAERIQGFL 547
DWD LR Q ++ER+ +TMD+LD++AVRCA V EI+ TIKERGMNN LAERI+ FL
Sbjct: 578 DWDKLRKEVQVNGTEKERSMDTMDSLDYEAVRCASVKEISKTIKERGMNNLLAERIKEFL 637
Query: 548 NRLVEKHGSIDLEWLRDVPPDQAKEYLLSFRGLGLKSVECVRLLTLHHLAFP 599
+RLV +HGSIDLEWLR VP D+AK++LLSFRGLGLKSVECVRLLTL ++AFP
Sbjct: 638 DRLVTEHGSIDLEWLRHVPQDKAKDFLLSFRGLGLKSVECVRLLTLQNIAFP 689
>Glyma12g30640.1
Length = 388
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 52/67 (77%)
Query: 130 DEDKAKWWEEERNVFRGRADSFIARMHLVQGDRRFSRWKGSVVDSVVGVFLTQNVSDHLS 189
DE K K+WE+ R +F + + FI M + QGDRRF WKGSV+DSVVG FLTQNVSDHLS
Sbjct: 37 DEMKHKYWEDIRKMFWYKVEPFIQHMRVFQGDRRFLPWKGSVLDSVVGAFLTQNVSDHLS 96
Query: 190 SSAYMSL 196
+SA+M+L
Sbjct: 97 TSAFMTL 103
>Glyma15g30630.1
Length = 116
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 62/99 (62%), Gaps = 3/99 (3%)
Query: 160 GDRRFSRWKGSVVDSVVGVFLTQNVSDHLSSSAYMSLAARFPPKPSSMRKTCHGEGTSLE 219
GDRRFS+WK SVVDSV+G+FLT+NVSDHLSSSA+MSLA+RF + S + + T+
Sbjct: 1 GDRRFSKWKRSVVDSVIGIFLTRNVSDHLSSSAFMSLASRFSLQSKSNKS--YDVDTNRL 58
Query: 220 VNEPQVQIVEPEEN-TECDVKLLNQSLHDQSFTTIDIAK 257
E ++ IV P + T LNQ + F T AK
Sbjct: 59 FKEARLCIVNPADTITSYGYGTLNQPTYHLGFKTPHHAK 97
>Glyma05g01820.1
Length = 284
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%)
Query: 515 WDAVRCADVNEIANTIKERGMNNRLAERIQGFLNRLVEKHGSIDLEWLRDVPPDQAKEYL 574
W+ V A+ ++ N I+ G+ A I+ L L E+ G + LE+LRD+ D+ K L
Sbjct: 117 WEQVLWAESKDVENAIRCGGLAPTKASCIKNVLRCLRERRGELCLEYLRDLSVDEVKAEL 176
Query: 575 LSFRGLGLKSVECVRLLTLHHLAFP 599
F+G+G K+V CV + L FP
Sbjct: 177 SLFKGIGPKTVACVLMFNLQQDDFP 201