Miyakogusa Predicted Gene

Lj5g3v0706670.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0706670.1 tr|A9SW65|A9SW65_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_136271,46.99,0.000000000000003,Nucleopor_Nup85,
Nucleoporin Nup85-like; SUBFAMILY NOT NAMED,NULL; FROUNT
PROTEIN-RELATED,NULL,CUFF.53819.1
         (97 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g27490.1                                                       169   5e-43

>Glyma17g27490.1 
          Length = 698

 Score =  169 bits (429), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 81/93 (87%), Positives = 84/93 (90%)

Query: 1   MKQGMSLLENLLYRQSVQHNDTLLKNIEICRLYELDHISSKIMKVAGVFHWKHGPKGAGV 60
           MKQGM LLENLLYRQS QHND LLKNIEICRLYELDHISS IMK+AGV HWKHG KGAGV
Sbjct: 470 MKQGMGLLENLLYRQSAQHNDVLLKNIEICRLYELDHISSNIMKIAGVHHWKHGHKGAGV 529

Query: 61  FWLQQAQDASCLGRIALQLFDAVGKLISDESFK 93
           FWLQQAQDASCL +IA QLFD+VGK ISDESFK
Sbjct: 530 FWLQQAQDASCLDKIAQQLFDSVGKSISDESFK 562