Miyakogusa Predicted Gene

Lj5g3v0655950.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0655950.1 Non Chatacterized Hit- tr|I1L8Y1|I1L8Y1_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,63.48,2e-18,seg,NULL,CUFF.53625.1
         (121 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g06270.1                                                        82   9e-17

>Glyma10g06270.1 
          Length = 154

 Score = 82.4 bits (202), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 66/115 (57%), Positives = 70/115 (60%), Gaps = 3/115 (2%)

Query: 3   TLTPLFFKALTTAHTLCPLS--WPXXXXXXXXXXXXLPPIPISGSSVFSRIASTSPTDAA 60
           TLTPLF KA TTA T  PLS  +              PP P SG+SVFSRIA+TSPT AA
Sbjct: 11  TLTPLFLKARTTAQTASPLSTLFFSISLSASKWTPPPPPTPSSGASVFSRIANTSPTHAA 70

Query: 61  AFTLKLLPQSNAFAIACSTVDALATTLPPPFQSTTFAVMCFAPRNTRKTNLLAIL 115
           A      P SNA   ACSTVDA ATTL   F STTFAVMCF   NT KT LL I+
Sbjct: 71  ALASHPFPHSNAPLSACSTVDAPATTL-SRFPSTTFAVMCFPDTNTLKTYLLIII 124