Miyakogusa Predicted Gene

Lj5g3v0641470.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0641470.2 Non Chatacterized Hit- tr|I1L8X8|I1L8X8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51038 PE,79.58,0,NUCLEAR
PORE COMPLEX PROTEIN NUP160,NULL; Nup160,Nucleoporin Nup120/160;
seg,NULL,CUFF.53610.2
         (1460 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g06230.1                                                      2291   0.0  
Glyma13g20540.1                                                      1210   0.0  
Glyma18g38840.1                                                        71   1e-11

>Glyma10g06230.1 
          Length = 1464

 Score = 2291 bits (5937), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1137/1465 (77%), Positives = 1247/1465 (85%), Gaps = 45/1465 (3%)

Query: 1    MGTGWTLDAKEVPIIGSDAVRWIDLSVPSSANIAVGSGATPLAPPTTDNRASCSAIGDPP 60
            MGTG TL  KEVPI+GSDAVRWIDLSVPSS+NIA   G   L  PTTD+RASC  IGDPP
Sbjct: 1    MGTGSTLAGKEVPIVGSDAVRWIDLSVPSSSNIAAVDGVAAL--PTTDDRASCFVIGDPP 58

Query: 61   TYLIWRIHKDHSQSLELLEVSASKEFPRFGLRFTFPDALCPFAFICKNENSGSSRFPYLL 120
            TYLIWRIHK   QSLELLE++ASKEFPR GLRFTFPDALCPFAFI KNE SG+SRFPYLL
Sbjct: 59   TYLIWRIHKAQPQSLELLELAASKEFPRVGLRFTFPDALCPFAFIGKNEISGASRFPYLL 118

Query: 121  YVLTVSGLAYLLRIRNVSAYASCSIIPVDELFEFDVRGYVSNNXXXXXXXXXXXXXXXX- 179
            YVLTVSG+AYLL+IRNVSAY S S+ PVDEL E +VR Y+ N+                 
Sbjct: 119  YVLTVSGVAYLLKIRNVSAYTSVSVFPVDELLEVNVRDYIPNHATAITTVMATVGGLVVG 178

Query: 180  XSDGSVCCFQLGVLDPSAPGFLHELRDEAGISRLWGLISGGKMVASAQDLVICELHEKKF 239
             SDGSV CFQLGV+DPSAPGF+HELRDEAGISRL      GKMV + Q+LVI ELHEKKF
Sbjct: 179  TSDGSVFCFQLGVVDPSAPGFMHELRDEAGISRL------GKMVGTVQELVILELHEKKF 232

Query: 240  LFVLHLDGTLRIWDLASHARVFTHNMGVMTMA-GANFQRLWVGQSYPELSRIPLAILYGH 298
            +FVLHLDGTLRIWDLAS +RVF++NMG +TMA GA F +LWVGQ YP+ + IPLA+LY  
Sbjct: 233  VFVLHLDGTLRIWDLASRSRVFSNNMGTVTMAAGATFVKLWVGQPYPDSNIIPLAVLYRD 292

Query: 299  SPDENLGMISLHGILYNVGDRIIFSMEPSVQNLSLEEGRCLDVKLMSNKIWILKDDELVS 358
            + DENL MISL+ ILYN GDRI+FSM+PSVQ++ LEEGRCLDVKL  +KIWILKDDELVS
Sbjct: 293  TSDENLEMISLYSILYNFGDRIVFSMDPSVQSIPLEEGRCLDVKLTLDKIWILKDDELVS 352

Query: 359  HLLSTDIYEAEAFSLALQEEFVAEQLFQNSEHLVDEILRITHSIFSSSKEDILSFVSSIF 418
            H +       EAFS ALQEEFVA+QLFQ+SEHL DEILRITHSIF SSK+DI  FVSSIF
Sbjct: 353  HTV-------EAFSYALQEEFVADQLFQSSEHLADEILRITHSIFKSSKDDIFPFVSSIF 405

Query: 419  LRRLLLPGVHLNAALYATLVEYNRHLAESELQTLTADGLKKEILSLIEHEVASEKVSILH 478
            LRRLLLPGVH NA LYATL+EY+RHL ESELQTLTADGLKKEILSLIEHE          
Sbjct: 406  LRRLLLPGVHHNATLYATLLEYSRHLGESELQTLTADGLKKEILSLIEHE---------- 455

Query: 479  CWKCFFTRYFHNWCKNNALYGLLFDSSSGAVGLIRKNSVSLFRSLEDIERIVE-GSSDEV 537
                           NNALYGLL DSSS A+GLIRKNS+SLFRSLEDIERIVE GSS+EV
Sbjct: 456  ---------------NNALYGLLVDSSSDAIGLIRKNSISLFRSLEDIERIVEVGSSEEV 500

Query: 538  NELTGLAXXXXXXXXXXXXXXXXRCVIGFSQQLGKTASSIFYESLLTASVISSEDIVHCI 597
            +ELTGL                 RCVI FSQQLGKTASSIFYESLLT SVISSEDIV  I
Sbjct: 501  SELTGLVDIFNDDLDCDILIELLRCVISFSQQLGKTASSIFYESLLTTSVISSEDIVRYI 560

Query: 598  MKILETGYCISGPVLQTSTSGDNIIVLEKELADHKSLRKLSVDMFLSLQGLFRKASEWGK 657
            +KILETGYC+SGPVLQTSTSGD+I+VLEKELADHKSLRKLS+DMFLSLQGL +KAS WG+
Sbjct: 561  VKILETGYCMSGPVLQTSTSGDHIVVLEKELADHKSLRKLSIDMFLSLQGLHKKASAWGR 620

Query: 658  VLNVIEGFLKFLVPQKIMHKFDTEXXXXXXXXXXVHTAYQIAKVMFETAWDFLLFLSYLV 717
            +L VIEGFLKFLVPQK++  F+TE          VHT +QIAKVMFE+AWDFLLFLSYLV
Sbjct: 621  ILKVIEGFLKFLVPQKVIQNFNTEVSSNINSSVIVHTTFQIAKVMFESAWDFLLFLSYLV 680

Query: 718  EISGQIHLSPDDITKIQLELVPMLQETIFEWLVIIFFAITPATPAVTEDFNSKLSSLQID 777
            +ISGQ+HL  DDI KIQL+LVPMLQE IFEWL+IIFF ITP+ PAVTEDFNSKLSSLQID
Sbjct: 681  DISGQVHLLHDDINKIQLDLVPMLQEIIFEWLIIIFFTITPSAPAVTEDFNSKLSSLQID 740

Query: 778  NNLGKQLWNEKLGRCDFTLAFMFLLNVKSASVVHSYLWTERFSDMQSYINRMRDFISLII 837
            NN+GK+LWNEKLGR DFTLA+ FLLNV S+S+ HS+  +E FS++QS+IN+ RDFIS II
Sbjct: 741  NNMGKRLWNEKLGRYDFTLAYTFLLNVGSSSLDHSHYSSEHFSNVQSFINKTRDFISWII 800

Query: 838  WGQAGGSSTFLSRSIDLAFILFKHDQYGAAEQLLMMVEGHLLKEKTSHSIQDTDGGWCIR 897
            WGQ GGSSTFL+RSIDLAFILFKHDQYGAAEQLLM+ E HLLKEKTS SIQD DGGWCIR
Sbjct: 801  WGQTGGSSTFLTRSIDLAFILFKHDQYGAAEQLLMIAEAHLLKEKTSQSIQDDDGGWCIR 860

Query: 898  HHLLGCCLLAQVQGGLHATKKDKKVSDAIRCFFRFSSGNGASEALQSLSADIGIPYLGFS 957
            HHLLGCCLLAQVQ GLHAT+KDKKVS+AIRCFFR SSGNGASEALQSLS D+GIPYLGF+
Sbjct: 861  HHLLGCCLLAQVQCGLHATQKDKKVSEAIRCFFRSSSGNGASEALQSLSDDLGIPYLGFN 920

Query: 958  GYTSIAIWRLQYYQWAMQLFERYNVSEGASQFALAALEQVDEALQTQDEKCIGSSVNESV 1017
            G TSIA W+LQYYQWAMQLFERY++SEGA QFALAALEQVDEAL  +D+KC  +SVNESV
Sbjct: 921  GCTSIAAWKLQYYQWAMQLFERYSISEGACQFALAALEQVDEALYMKDDKCTNNSVNESV 980

Query: 1018 TTIKGRLWANVFIFALDLGRFHDAYCAIISNPDEESKYICLRRFIIVLYEQGAIKILCSN 1077
            TTIKGRLWANVFIF LDLGR++DAYCAIISNPDEESKYICLRRFIIVLYEQGAIKILCSN
Sbjct: 981  TTIKGRLWANVFIFVLDLGRYYDAYCAIISNPDEESKYICLRRFIIVLYEQGAIKILCSN 1040

Query: 1078 KLPLIGLVEKVEQELAWKAERSDISAKPNLYKLLYAFQFHQHNWRRAASYIYLYSARLRT 1137
            KLPLIGLVEKVEQELAWKAERSDISAKPNLYKLLYAFQ H+HNWRRAASY+YLYSARLRT
Sbjct: 1041 KLPLIGLVEKVEQELAWKAERSDISAKPNLYKLLYAFQLHRHNWRRAASYMYLYSARLRT 1100

Query: 1138 EAALKDNQGSSMILQERLNALSAAVNALHLVHPAYAWIDPLAERSSPLSEHNPTKKAKRT 1197
            EAALKD+ GSS++LQERLNALS+AVNALHLVHPAYAWID LAE S  ++E+ P+KKAKRT
Sbjct: 1101 EAALKDSVGSSLMLQERLNALSSAVNALHLVHPAYAWIDSLAEGSYLVNEYYPSKKAKRT 1160

Query: 1198 PDEHT--DNDAEPQSWQSSIDIEKLEDEYALTLAEYMLSLVNVKWAFSGKHGALSELADL 1255
            PDEH+  DNDAEPQ WQSSIDIEKLE+E+ LT AEYMLSLVN KW FSGKHGALS+LADL
Sbjct: 1161 PDEHSAADNDAEPQGWQSSIDIEKLENEFVLTSAEYMLSLVNFKWTFSGKHGALSDLADL 1220

Query: 1256 LVQNNLYDMAFTILLRFFKGSGLKRELERCLSDMALKCCFDKVESNWVEEHGHLLTSSKL 1315
            LVQNNLYDMAFTILLRFFKGSGLKRELER LS ++LKCC DKVES+WVEEH HLLTSSK 
Sbjct: 1221 LVQNNLYDMAFTILLRFFKGSGLKRELERVLSAISLKCCLDKVESSWVEEHSHLLTSSKH 1280

Query: 1316 EMVVHGSPVRLPTAPQTDRNSRWATLKLYLEKYKEFHGRLPVIVAETLLRADSKIELPLW 1375
            EMV HGSP  + T PQTDRNS WATLKLYLEKYKEFHGRLP+IVAETLLR D KIELPLW
Sbjct: 1281 EMVAHGSPATVSTTPQTDRNSCWATLKLYLEKYKEFHGRLPIIVAETLLRTDPKIELPLW 1340

Query: 1376 LVQLFKESQKDRMWGMTGRESTPASLFQLYVNYGRYAEATYLLLEYIESFASTRPADIIR 1435
            LVQLFKE QK+R+WGM GRES PASLFQLYV+Y RYAEATYLLL+ I+SFAS RPADIIR
Sbjct: 1341 LVQLFKEGQKERLWGMAGRESNPASLFQLYVSYDRYAEATYLLLDCIDSFASMRPADIIR 1400

Query: 1436 RKRPFAAWFPYTTIERLLYQLEELI 1460
            RKRP A WFPYTTIERLLYQL+ELI
Sbjct: 1401 RKRPLAVWFPYTTIERLLYQLDELI 1425


>Glyma13g20540.1 
          Length = 1252

 Score = 1210 bits (3130), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 592/728 (81%), Positives = 648/728 (89%), Gaps = 2/728 (0%)

Query: 514  KNSVSLFRSLEDIERIVEGSSDEVNELTGLAXXXXXXXXXXXXXXXXRCVIGFSQQLGKT 573
            K S+SLFRSLEDIERIVEGSSDEV+ELTGL                 RCVI FSQQLGKT
Sbjct: 375  KKSISLFRSLEDIERIVEGSSDEVSELTGLVDIFDDDLECEILIELLRCVISFSQQLGKT 434

Query: 574  ASSIFYESLLTASVISSEDIVHCIMKILETGYCISGPVLQTSTSGDNIIVLEKELADHKS 633
            ASSIFYESLLT S+ISSEDIV  I+KILETGYC+SGPVLQTSTSG++I+VLEKELADHKS
Sbjct: 435  ASSIFYESLLTTSLISSEDIVCYIVKILETGYCMSGPVLQTSTSGNHIVVLEKELADHKS 494

Query: 634  LRKLSVDMFLSLQGLFRKASEWGKVLNVIEGFLKFLVPQKIMHKFDTEXXXXXXXXXXVH 693
            LRKLSVDMFLSLQGL +KASEWG++L VIEGFLKFLVPQK++  F+TE          VH
Sbjct: 495  LRKLSVDMFLSLQGLHKKASEWGRILKVIEGFLKFLVPQKVIQNFNTEVSSNINSSVIVH 554

Query: 694  TAYQIAKVMFETAWDFLLFLSYLVEISGQIHLSPDDITKIQLELVPMLQETIFEWLVIIF 753
            T YQIAKVMFE+AWDFLLFLSYLV+ISGQ+HLS DDI K+QLELVPMLQE IFEWL+IIF
Sbjct: 555  TTYQIAKVMFESAWDFLLFLSYLVDISGQVHLSHDDINKVQLELVPMLQEIIFEWLIIIF 614

Query: 754  FAITPATPAVTEDFNSKLSSLQIDNNLGKQLWNEKLGRCDFTLAFMFLLNVKSASVVHSY 813
            F ITP+ PAVTEDFNSKLSSLQIDNN+GKQLWNEKLGRCDFTLAF+FLLNV S+S+ HS+
Sbjct: 615  FTITPSAPAVTEDFNSKLSSLQIDNNMGKQLWNEKLGRCDFTLAFIFLLNVGSSSIDHSH 674

Query: 814  LWTERFSDMQSYINRMRDFISLIIWGQAGGSSTFLSRSIDLAFILFKHDQYGAAEQLLMM 873
            + +E FS++QS+IN+ RDFIS IIWGQAGGSSTFLSRSIDLAFILFKH QYGAAEQLLM+
Sbjct: 675  VSSEHFSNVQSFINKTRDFISWIIWGQAGGSSTFLSRSIDLAFILFKHGQYGAAEQLLMI 734

Query: 874  VEGHLLKEKTSHSIQDTDGGWCIRHHLLGCCLLAQVQGGLHATKKDKKVSDAIRCFFRFS 933
             E HLLKEKTS SIQD DGGWCIRHHLLGCCLLAQVQ GLHAT+KDKKVS+AIRCFFR S
Sbjct: 735  AEAHLLKEKTSQSIQDDDGGWCIRHHLLGCCLLAQVQCGLHATQKDKKVSEAIRCFFRSS 794

Query: 934  SGNGASEALQSLSADIGIPYLGFSGYTSIAIWRLQYYQWAMQLFERYNVSEGASQFALAA 993
            SGNGASEALQSLS D+GIPYLGFSG TSIA W+LQYYQWAMQLFERY++SEGA QFALAA
Sbjct: 795  SGNGASEALQSLSDDLGIPYLGFSGCTSIAAWKLQYYQWAMQLFERYSISEGACQFALAA 854

Query: 994  LEQVDEALQTQDEKCIGSSVNESVTTIKGRLWANVFIFALDLGRFHDAYCAIISNPDEES 1053
            LEQVDEAL  +D+KC  +SVNESVTTIKGRLWANVFIFALDLGRF+DAYCAIISNPDEES
Sbjct: 855  LEQVDEALYMKDDKCTNNSVNESVTTIKGRLWANVFIFALDLGRFYDAYCAIISNPDEES 914

Query: 1054 KYICLRRFIIVLYEQGAIKILCSNKLPLIGLVEKVEQELAWKAERSDISAKPNLYKLLYA 1113
            KYICLRRFIIVLYEQGAIKILCS+KLPLIGLVEKVEQEL WKA+RSDIS KPNLYKLLYA
Sbjct: 915  KYICLRRFIIVLYEQGAIKILCSDKLPLIGLVEKVEQELVWKADRSDISVKPNLYKLLYA 974

Query: 1114 FQFHQHNWRRAASYIYLYSARLRTEAALKDNQGSSMILQERLNALSAAVNALHLVHPAYA 1173
            FQ H+HNWR+AASY+Y+YSARLRTEAALKD  GSS++LQERLNALSAAVNALHLVHPAYA
Sbjct: 975  FQLHRHNWRQAASYMYMYSARLRTEAALKDCVGSSLMLQERLNALSAAVNALHLVHPAYA 1034

Query: 1174 WIDPLAERSSPLSEHNPTKKAKRTPDEHT--DNDAEPQSWQSSIDIEKLEDEYALTLAEY 1231
            WID LAE SS ++EH P+KKAKRTPDEH+  DNDAEPQ WQSSIDIEKLE+E+ LT AEY
Sbjct: 1035 WIDSLAEGSSIVNEHYPSKKAKRTPDEHSAADNDAEPQGWQSSIDIEKLENEFVLTSAEY 1094

Query: 1232 MLSLVNVK 1239
            MLSL   K
Sbjct: 1095 MLSLEKYK 1102



 Score =  545 bits (1405), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 276/404 (68%), Positives = 315/404 (77%), Gaps = 12/404 (2%)

Query: 1   MGTGWTLDAKEVPIIGSDAVRWIDLSVPSSANIA-VGSGATPLAPPTTDNRASCSAIGDP 59
           MGTG TL +KEVPI+GSDAVRWIDLSVPSS+NIA V  G    AP TTD+RASC  IGDP
Sbjct: 1   MGTGSTLASKEVPIVGSDAVRWIDLSVPSSSNIAAVDDGGA--APLTTDDRASCFVIGDP 58

Query: 60  PTYLIWRIHKDHSQSLELLEVSASKEFPRFGLRFTFPDALCPFAFICKNENSGSSRFPYL 119
           PTYLIWRIHK    SLELLE++ASKEFPR GLRFTFPDALCPFAFICKNE SG+SR PYL
Sbjct: 59  PTYLIWRIHKAQPHSLELLELAASKEFPRVGLRFTFPDALCPFAFICKNEISGASRVPYL 118

Query: 120 LYVLTVSGLAYLLRIRNVSAYASCSIIPVDELFEFDVRGYVSNNXXXXXXXXXXX-XXXX 178
           LYVLTVSG+AYLL+IRNVS YAS S+ PVDEL E +VRGY+ N+                
Sbjct: 119 LYVLTVSGVAYLLKIRNVSVYASVSVFPVDELLEVNVRGYIPNHAATITAVTATVGGLVV 178

Query: 179 XXSDGSVCCFQLGVLDPSAPGFLHELRDEAGISRLWGLISGGKMVASAQDLVICELHEKK 238
             SDGSV CFQLGVLD SAPGF+HELRD+AGISRLWGLIS GKMV + Q+L I ELHEKK
Sbjct: 179 GTSDGSVFCFQLGVLDSSAPGFMHELRDDAGISRLWGLISRGKMVGTVQELAILELHEKK 238

Query: 239 FLFVLHLDGTLRIWDLASHARVFTHNMGVMTMAGANFQRLWVGQSYPELSRIPLAILYGH 298
           F+FVLHLDGTLRIWDLASH+RVF++NMG M MAGA F RLWVGQ YP+ S IPLA+LY  
Sbjct: 239 FVFVLHLDGTLRIWDLASHSRVFSNNMGTMAMAGATFVRLWVGQPYPDSSVIPLAVLYRD 298

Query: 299 S-------PDENLGMISLHGILYNVGDRIIFSMEPSVQNLSLEEGRCLDVKLMSNKIWIL 351
           +        DE+L MISL+ +L+N GDRI+FSMEPSVQN+ LEEGRCLDVKL  +KIWIL
Sbjct: 299 TLFLGLIVKDESLEMISLYSVLFNFGDRIVFSMEPSVQNIPLEEGRCLDVKLTLDKIWIL 358

Query: 352 KDDELVSHLLSTDIYEAEAFSLALQEEFVAEQLFQNSEHLVDEI 395
           KDDELVSH LST+I E ++ SL    E + E++ + S   V E+
Sbjct: 359 KDDELVSHTLSTNIDEKKSISLFRSLEDI-ERIVEGSSDEVSEL 401



 Score =  216 bits (550), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 103/122 (84%), Positives = 108/122 (88%)

Query: 1339 ATLKLYLEKYKEFHGRLPVIVAETLLRADSKIELPLWLVQLFKESQKDRMWGMTGRESTP 1398
            A   L LEKYKE HGRLP+IVAETLLR+D KIELPLWLVQLFKE QK+R WGMTGRES P
Sbjct: 1092 AEYMLSLEKYKELHGRLPIIVAETLLRSDPKIELPLWLVQLFKEGQKERSWGMTGRESNP 1151

Query: 1399 ASLFQLYVNYGRYAEATYLLLEYIESFASTRPADIIRRKRPFAAWFPYTTIERLLYQLEE 1458
            ASLFQLYV+Y RYAEATYLLLE I+SFAS RPADIIRRKRP A WFPYTTIERLLYQLEE
Sbjct: 1152 ASLFQLYVSYDRYAEATYLLLECIDSFASMRPADIIRRKRPLAVWFPYTTIERLLYQLEE 1211

Query: 1459 LI 1460
            LI
Sbjct: 1212 LI 1213


>Glyma18g38840.1 
          Length = 77

 Score = 70.9 bits (172), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/37 (86%), Positives = 33/37 (89%)

Query: 740 MLQETIFEWLVIIFFAITPATPAVTEDFNSKLSSLQI 776
           MLQE IFEWL+IIFF ITP  PAVTEDFNSKLSSLQI
Sbjct: 1   MLQEIIFEWLIIIFFTITPYAPAVTEDFNSKLSSLQI 37