Miyakogusa Predicted Gene

Lj5g3v0641470.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0641470.1 Non Chatacterized Hit- tr|I1L8X8|I1L8X8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51038 PE,77.68,0,NUCLEAR
PORE COMPLEX PROTEIN NUP160,NULL; Nup160,Nucleoporin Nup120/160;
seg,NULL,CUFF.53610.1
         (1323 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g06230.1                                                      1966   0.0  
Glyma13g20540.1                                                      1194   0.0  
Glyma18g38840.1                                                        71   9e-12

>Glyma10g06230.1 
          Length = 1464

 Score = 1966 bits (5092), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 990/1313 (75%), Positives = 1089/1313 (82%), Gaps = 73/1313 (5%)

Query: 1    MGTGWTLDAKEVPIIGSDAVRWIDLSVPSSANIAVGSGATPLAPPTTDNRASCSAIGDPP 60
            MGTG TL  KEVPI+GSDAVRWIDLSVPSS+NIA   G   L  PTTD+RASC  IGDPP
Sbjct: 1    MGTGSTLAGKEVPIVGSDAVRWIDLSVPSSSNIAAVDGVAAL--PTTDDRASCFVIGDPP 58

Query: 61   TYLIWRIHKDHSQSLELLEVSASKEFPRFGLRFTFPDALCPFAFICKNENSGSSRFPYLL 120
            TYLIWRIHK   QSLELLE++ASKEFPR GLRFTFPDALCPFAFI KNE SG+SRFPYLL
Sbjct: 59   TYLIWRIHKAQPQSLELLELAASKEFPRVGLRFTFPDALCPFAFIGKNEISGASRFPYLL 118

Query: 121  YVLTVSGLAYLLRIRNVSAYASCSIIPVDELFEFDVRGYVSNNXXXXXXXXXXXXXXXX- 179
            YVLTVSG+AYLL+IRNVSAY S S+ PVDEL E +VR Y+ N+                 
Sbjct: 119  YVLTVSGVAYLLKIRNVSAYTSVSVFPVDELLEVNVRDYIPNHATAITTVMATVGGLVVG 178

Query: 180  XSDGSVCCFQLGVLDPSAPGFLHELRDEAGISRLWGLISGGKMVASAQDLVICELHEKKF 239
             SDGSV CFQLGV+DPSAPGF+HELRDEAGISRL      GKMV + Q+LVI ELHEKKF
Sbjct: 179  TSDGSVFCFQLGVVDPSAPGFMHELRDEAGISRL------GKMVGTVQELVILELHEKKF 232

Query: 240  LFVLHLDGTLRIWDLASHARVFTHNMGVMTMA-GANFQRLWVGQSYPELSRIPLAILYGH 298
            +FVLHLDGTLRIWDLAS +RVF++NMG +TMA GA F +LWVGQ YP+ + IPLA+LY  
Sbjct: 233  VFVLHLDGTLRIWDLASRSRVFSNNMGTVTMAAGATFVKLWVGQPYPDSNIIPLAVLYRD 292

Query: 299  SPDENLGMISLHGILYNVGDRIIFSMEPSVQNLSLEEGRCLDVKLMSNKIWILKDDELVS 358
            + DENL MISL+ ILYN GDRI+FSM+PSVQ++ LEEGRCLDVKL  +KIWILKDDELVS
Sbjct: 293  TSDENLEMISLYSILYNFGDRIVFSMDPSVQSIPLEEGRCLDVKLTLDKIWILKDDELVS 352

Query: 359  HLLSTDIYEAEAFSLALQEEFVAEQLFQNSEHLVDEILRITHSIFSSSKEDILSFVSSIF 418
            H +       EAFS ALQEEFVA+QLFQ+SEHL DEILRITHSIF SSK+DI  FVSSIF
Sbjct: 353  HTV-------EAFSYALQEEFVADQLFQSSEHLADEILRITHSIFKSSKDDIFPFVSSIF 405

Query: 419  LRRLLLPGVHLNAALYATLVEYNRHLAESELQTLTADGLKKEILSLIEHEVASEKVSILH 478
            LRRLLLPGVH NA LYATL+EY+RHL ESELQTLTADGLKKEILSLIEHE          
Sbjct: 406  LRRLLLPGVHHNATLYATLLEYSRHLGESELQTLTADGLKKEILSLIEHE---------- 455

Query: 479  CWKCFFTRYFHNWCKNNALYGLLFDSSSGAVGLIRKNSVSLFRSLEDIERIVE-GSSDEV 537
                           NNALYGLL DSSS A+GLIRKNS+SLFRSLEDIERIVE GSS+EV
Sbjct: 456  ---------------NNALYGLLVDSSSDAIGLIRKNSISLFRSLEDIERIVEVGSSEEV 500

Query: 538  NELTGLAXXXXXXXXXXXXXXXXRCVIGFSQQLGKTASSIFYESLLTASVISSEDIVHCI 597
            +ELTGL                 RCVI FSQQLGKTASSIFYESLLT SVISSEDIV  I
Sbjct: 501  SELTGLVDIFNDDLDCDILIELLRCVISFSQQLGKTASSIFYESLLTTSVISSEDIVRYI 560

Query: 598  MKILETGYCISGPVLQTSTSGDNIIVLEKELADHKSLRKLSVDMFLSLQGLFRKASEWGK 657
            +KILETGYC+SGPVLQTSTSGD+I+VLEKELADHKSLRKLS+DMFLSLQGL +KAS WG+
Sbjct: 561  VKILETGYCMSGPVLQTSTSGDHIVVLEKELADHKSLRKLSIDMFLSLQGLHKKASAWGR 620

Query: 658  VLNVIEGFLKFLVPQKIMHKFDTEXXXXXXXXXXVHTAYQIAKVMFETAWDFLLFLSYLV 717
            +L VIEGFLKFLVPQK++  F+TE          VHT +QIAKVMFE+AWDFLLFLSYLV
Sbjct: 621  ILKVIEGFLKFLVPQKVIQNFNTEVSSNINSSVIVHTTFQIAKVMFESAWDFLLFLSYLV 680

Query: 718  EISGQIHLSPDDITKIQLELVPMLQETIFEWLVIIFFAITPATPAVTEDFNSKLSSLQID 777
            +ISGQ+HL  DDI KIQL+LVPMLQE IFEWL+IIFF ITP+ PAVTEDFNSKLSSLQID
Sbjct: 681  DISGQVHLLHDDINKIQLDLVPMLQEIIFEWLIIIFFTITPSAPAVTEDFNSKLSSLQID 740

Query: 778  NNLGKQLWNEKLGRCDFTLAFMFLLNVKSASVVHSYLWTERFSDMQSYINRMRDFISLII 837
            NN+GK+LWNEKLGR DFTLA+ FLLNV S+S+ HS+  +E FS++QS+IN+ RDFIS II
Sbjct: 741  NNMGKRLWNEKLGRYDFTLAYTFLLNVGSSSLDHSHYSSEHFSNVQSFINKTRDFISWII 800

Query: 838  WGQAGGSSTFLSRSIDLAFILFKHDQYGAAEQLLMMVEGHLLKEKTSHSIQDTDGGWCIR 897
            WGQ GGSSTFL+RSIDLAFILFKHDQYGAAEQLLM+ E HLLKEKTS SIQD DGGWCIR
Sbjct: 801  WGQTGGSSTFLTRSIDLAFILFKHDQYGAAEQLLMIAEAHLLKEKTSQSIQDDDGGWCIR 860

Query: 898  HHLLGCCLLAQVQGGLHATKKDKKVSDAIRCFFRFSSGNGASEALQSLSADIGIPYLGFS 957
            HHLLGCCLLAQVQ GLHAT+KDKKVS+AIRCFFR SSGNGASEALQSLS D+GIPYLGF+
Sbjct: 861  HHLLGCCLLAQVQCGLHATQKDKKVSEAIRCFFRSSSGNGASEALQSLSDDLGIPYLGFN 920

Query: 958  GYLCCYVLMILNNRLFQLIINLCGFCTGGYTSIAIWRLQYYQWAMQLFERYNVSEGASQF 1017
            G  C                          TSIA W+LQYYQWAMQLFERY++SEGA QF
Sbjct: 921  G--C--------------------------TSIAAWKLQYYQWAMQLFERYSISEGACQF 952

Query: 1018 ALAALEQVDEALQTQDEKCIGSSVNESVTTIKGRLWANVFIFALDLGRFHDAYCAIISNP 1077
            ALAALEQVDEAL  +D+KC  +SVNESVTTIKGRLWANVFIF LDLGR++DAYCAIISNP
Sbjct: 953  ALAALEQVDEALYMKDDKCTNNSVNESVTTIKGRLWANVFIFVLDLGRYYDAYCAIISNP 1012

Query: 1078 DEESKYICLRRFIIVLYEQGAIKILCSNKLPLIGLVEKVEQELAWKAERSDISAKPNLYK 1137
            DEESKYICLRRFIIVLYEQGAIKILCSNKLPLIGLVEKVEQELAWKAERSDISAKPNLYK
Sbjct: 1013 DEESKYICLRRFIIVLYEQGAIKILCSNKLPLIGLVEKVEQELAWKAERSDISAKPNLYK 1072

Query: 1138 LLYAFQFHQHNWRRAASYIYLYSARLRTEAALKDNQGSSMILQERLNALSAAVNALHLVH 1197
            LLYAFQ H+HNWRRAASY+YLYSARLRTEAALKD+ GSS++LQERLNALS+AVNALHLVH
Sbjct: 1073 LLYAFQLHRHNWRRAASYMYLYSARLRTEAALKDSVGSSLMLQERLNALSSAVNALHLVH 1132

Query: 1198 PAYAWIDPLAERSSPLSEHNPTKKAKRTPDEHT--DNDAEPQSWQSSIDIEKLEDEYALT 1255
            PAYAWID LAE S  ++E+ P+KKAKRTPDEH+  DNDAEPQ WQSSIDIEKLE+E+ LT
Sbjct: 1133 PAYAWIDSLAEGSYLVNEYYPSKKAKRTPDEHSAADNDAEPQGWQSSIDIEKLENEFVLT 1192

Query: 1256 LAEYMLSLVNVKWAFSGKHGALSELADLLVQNNLYDMAFTILLRFFKGSGLKR 1308
             AEYMLSLVN KW FSGKHGALS+LADLLVQNNLYDMAFTILLRFFKGSGLKR
Sbjct: 1193 SAEYMLSLVNFKWTFSGKHGALSDLADLLVQNNLYDMAFTILLRFFKGSGLKR 1245


>Glyma13g20540.1 
          Length = 1252

 Score = 1194 bits (3089), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 593/756 (78%), Positives = 649/756 (85%), Gaps = 30/756 (3%)

Query: 514  KNSVSLFRSLEDIERIVEGSSDEVNELTGLAXXXXXXXXXXXXXXXXRCVIGFSQQLGKT 573
            K S+SLFRSLEDIERIVEGSSDEV+ELTGL                 RCVI FSQQLGKT
Sbjct: 375  KKSISLFRSLEDIERIVEGSSDEVSELTGLVDIFDDDLECEILIELLRCVISFSQQLGKT 434

Query: 574  ASSIFYESLLTASVISSEDIVHCIMKILETGYCISGPVLQTSTSGDNIIVLEKELADHKS 633
            ASSIFYESLLT S+ISSEDIV  I+KILETGYC+SGPVLQTSTSG++I+VLEKELADHKS
Sbjct: 435  ASSIFYESLLTTSLISSEDIVCYIVKILETGYCMSGPVLQTSTSGNHIVVLEKELADHKS 494

Query: 634  LRKLSVDMFLSLQGLFRKASEWGKVLNVIEGFLKFLVPQKIMHKFDTEXXXXXXXXXXVH 693
            LRKLSVDMFLSLQGL +KASEWG++L VIEGFLKFLVPQK++  F+TE          VH
Sbjct: 495  LRKLSVDMFLSLQGLHKKASEWGRILKVIEGFLKFLVPQKVIQNFNTEVSSNINSSVIVH 554

Query: 694  TAYQIAKVMFETAWDFLLFLSYLVEISGQIHLSPDDITKIQLELVPMLQETIFEWLVIIF 753
            T YQIAKVMFE+AWDFLLFLSYLV+ISGQ+HLS DDI K+QLELVPMLQE IFEWL+IIF
Sbjct: 555  TTYQIAKVMFESAWDFLLFLSYLVDISGQVHLSHDDINKVQLELVPMLQEIIFEWLIIIF 614

Query: 754  FAITPATPAVTEDFNSKLSSLQIDNNLGKQLWNEKLGRCDFTLAFMFLLNVKSASVVHSY 813
            F ITP+ PAVTEDFNSKLSSLQIDNN+GKQLWNEKLGRCDFTLAF+FLLNV S+S+ HS+
Sbjct: 615  FTITPSAPAVTEDFNSKLSSLQIDNNMGKQLWNEKLGRCDFTLAFIFLLNVGSSSIDHSH 674

Query: 814  LWTERFSDMQSYINRMRDFISLIIWGQAGGSSTFLSRSIDLAFILFKHDQYGAAEQLLMM 873
            + +E FS++QS+IN+ RDFIS IIWGQAGGSSTFLSRSIDLAFILFKH QYGAAEQLLM+
Sbjct: 675  VSSEHFSNVQSFINKTRDFISWIIWGQAGGSSTFLSRSIDLAFILFKHGQYGAAEQLLMI 734

Query: 874  VEGHLLKEKTSHSIQDTDGGWCIRHHLLGCCLLAQVQGGLHATKKDKKVSDAIRCFFRFS 933
             E HLLKEKTS SIQD DGGWCIRHHLLGCCLLAQVQ GLHAT+KDKKVS+AIRCFFR S
Sbjct: 735  AEAHLLKEKTSQSIQDDDGGWCIRHHLLGCCLLAQVQCGLHATQKDKKVSEAIRCFFRSS 794

Query: 934  SGNGASEALQSLSADIGIPYLGFSGYLCCYVLMILNNRLFQLIINLCGFCTGGYTSIAIW 993
            SGNGASEALQSLS D+GIPYLGFSG  C                          TSIA W
Sbjct: 795  SGNGASEALQSLSDDLGIPYLGFSG--C--------------------------TSIAAW 826

Query: 994  RLQYYQWAMQLFERYNVSEGASQFALAALEQVDEALQTQDEKCIGSSVNESVTTIKGRLW 1053
            +LQYYQWAMQLFERY++SEGA QFALAALEQVDEAL  +D+KC  +SVNESVTTIKGRLW
Sbjct: 827  KLQYYQWAMQLFERYSISEGACQFALAALEQVDEALYMKDDKCTNNSVNESVTTIKGRLW 886

Query: 1054 ANVFIFALDLGRFHDAYCAIISNPDEESKYICLRRFIIVLYEQGAIKILCSNKLPLIGLV 1113
            ANVFIFALDLGRF+DAYCAIISNPDEESKYICLRRFIIVLYEQGAIKILCS+KLPLIGLV
Sbjct: 887  ANVFIFALDLGRFYDAYCAIISNPDEESKYICLRRFIIVLYEQGAIKILCSDKLPLIGLV 946

Query: 1114 EKVEQELAWKAERSDISAKPNLYKLLYAFQFHQHNWRRAASYIYLYSARLRTEAALKDNQ 1173
            EKVEQEL WKA+RSDIS KPNLYKLLYAFQ H+HNWR+AASY+Y+YSARLRTEAALKD  
Sbjct: 947  EKVEQELVWKADRSDISVKPNLYKLLYAFQLHRHNWRQAASYMYMYSARLRTEAALKDCV 1006

Query: 1174 GSSMILQERLNALSAAVNALHLVHPAYAWIDPLAERSSPLSEHNPTKKAKRTPDEHT--D 1231
            GSS++LQERLNALSAAVNALHLVHPAYAWID LAE SS ++EH P+KKAKRTPDEH+  D
Sbjct: 1007 GSSLMLQERLNALSAAVNALHLVHPAYAWIDSLAEGSSIVNEHYPSKKAKRTPDEHSAAD 1066

Query: 1232 NDAEPQSWQSSIDIEKLEDEYALTLAEYMLSLVNVK 1267
            NDAEPQ WQSSIDIEKLE+E+ LT AEYMLSL   K
Sbjct: 1067 NDAEPQGWQSSIDIEKLENEFVLTSAEYMLSLEKYK 1102



 Score =  545 bits (1405), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 276/405 (68%), Positives = 315/405 (77%), Gaps = 14/405 (3%)

Query: 1   MGTGWTLDAKEVPIIGSDAVRWIDLSVPSSANIAV--GSGATPLAPPTTDNRASCSAIGD 58
           MGTG TL +KEVPI+GSDAVRWIDLSVPSS+NIA     GA PL   TTD+RASC  IGD
Sbjct: 1   MGTGSTLASKEVPIVGSDAVRWIDLSVPSSSNIAAVDDGGAAPL---TTDDRASCFVIGD 57

Query: 59  PPTYLIWRIHKDHSQSLELLEVSASKEFPRFGLRFTFPDALCPFAFICKNENSGSSRFPY 118
           PPTYLIWRIHK    SLELLE++ASKEFPR GLRFTFPDALCPFAFICKNE SG+SR PY
Sbjct: 58  PPTYLIWRIHKAQPHSLELLELAASKEFPRVGLRFTFPDALCPFAFICKNEISGASRVPY 117

Query: 119 LLYVLTVSGLAYLLRIRNVSAYASCSIIPVDELFEFDVRGYVSNNXXXXXXXXXXX-XXX 177
           LLYVLTVSG+AYLL+IRNVS YAS S+ PVDEL E +VRGY+ N+               
Sbjct: 118 LLYVLTVSGVAYLLKIRNVSVYASVSVFPVDELLEVNVRGYIPNHAATITAVTATVGGLV 177

Query: 178 XXXSDGSVCCFQLGVLDPSAPGFLHELRDEAGISRLWGLISGGKMVASAQDLVICELHEK 237
              SDGSV CFQLGVLD SAPGF+HELRD+AGISRLWGLIS GKMV + Q+L I ELHEK
Sbjct: 178 VGTSDGSVFCFQLGVLDSSAPGFMHELRDDAGISRLWGLISRGKMVGTVQELAILELHEK 237

Query: 238 KFLFVLHLDGTLRIWDLASHARVFTHNMGVMTMAGANFQRLWVGQSYPELSRIPLAILYG 297
           KF+FVLHLDGTLRIWDLASH+RVF++NMG M MAGA F RLWVGQ YP+ S IPLA+LY 
Sbjct: 238 KFVFVLHLDGTLRIWDLASHSRVFSNNMGTMAMAGATFVRLWVGQPYPDSSVIPLAVLYR 297

Query: 298 HS-------PDENLGMISLHGILYNVGDRIIFSMEPSVQNLSLEEGRCLDVKLMSNKIWI 350
            +        DE+L MISL+ +L+N GDRI+FSMEPSVQN+ LEEGRCLDVKL  +KIWI
Sbjct: 298 DTLFLGLIVKDESLEMISLYSVLFNFGDRIVFSMEPSVQNIPLEEGRCLDVKLTLDKIWI 357

Query: 351 LKDDELVSHLLSTDIYEAEAFSLALQEEFVAEQLFQNSEHLVDEI 395
           LKDDELVSH LST+I E ++ SL    E + E++ + S   V E+
Sbjct: 358 LKDDELVSHTLSTNIDEKKSISLFRSLEDI-ERIVEGSSDEVSEL 401


>Glyma18g38840.1 
          Length = 77

 Score = 70.9 bits (172), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 32/37 (86%), Positives = 33/37 (89%)

Query: 740 MLQETIFEWLVIIFFAITPATPAVTEDFNSKLSSLQI 776
           MLQE IFEWL+IIFF ITP  PAVTEDFNSKLSSLQI
Sbjct: 1   MLQEIIFEWLIIIFFTITPYAPAVTEDFNSKLSSLQI 37