Miyakogusa Predicted Gene

Lj5g3v0630280.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0630280.2 Non Chatacterized Hit- tr|J3LIJ8|J3LIJ8_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB02G4,54.22,3e-19,seg,NULL,CUFF.53613.2
         (83 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g06130.1                                                       111   2e-25
Glyma13g20430.1                                                       109   8e-25
Glyma10g06130.2                                                       107   3e-24
Glyma13g20430.3                                                       106   6e-24
Glyma13g20430.2                                                        68   2e-12

>Glyma10g06130.1 
          Length = 82

 Score =  111 bits (278), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 56/83 (67%), Positives = 65/83 (78%), Gaps = 1/83 (1%)

Query: 1  MVCVACLLPLFLVPIINLLPLLFDFLMAKIYRVFGWEYRKPERAPPACPYKPSANGVSKQ 60
          MVC+ACLLPLFLVPI+N+LPLLF F+M KIYRVFGWEYRKPERAPPACP+KP AN VS +
Sbjct: 1  MVCLACLLPLFLVPIVNILPLLFHFIMGKIYRVFGWEYRKPERAPPACPFKPPANRVS-E 59

Query: 61 XXXXXXXXXXXXVKPESVNVKED 83
                      VKP +V+VK+D
Sbjct: 60 AEADVEPVPADPVKPGNVDVKQD 82


>Glyma13g20430.1 
          Length = 82

 Score =  109 bits (272), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 56/83 (67%), Positives = 63/83 (75%), Gaps = 1/83 (1%)

Query: 1  MVCVACLLPLFLVPIINLLPLLFDFLMAKIYRVFGWEYRKPERAPPACPYKPSANGVSKQ 60
          MVC+ACLLPLFLVPI+N+LPLL+ F+M KIYRVFGWEYRKPERAPP CPYKP  N VSK 
Sbjct: 1  MVCLACLLPLFLVPIVNILPLLYYFIMGKIYRVFGWEYRKPERAPPVCPYKPPTNRVSK- 59

Query: 61 XXXXXXXXXXXXVKPESVNVKED 83
                      VKP SV+VK+D
Sbjct: 60 VEADVEPVPADPVKPGSVDVKQD 82


>Glyma10g06130.2 
          Length = 79

 Score =  107 bits (267), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 54/83 (65%), Positives = 62/83 (74%), Gaps = 4/83 (4%)

Query: 1  MVCVACLLPLFLVPIINLLPLLFDFLMAKIYRVFGWEYRKPERAPPACPYKPSANGVSKQ 60
          MVC+ACLLPLFLVPI+N+LPLLF F+M KIYRVFGWEYRKPERAPPACP+KP AN     
Sbjct: 1  MVCLACLLPLFLVPIVNILPLLFHFIMGKIYRVFGWEYRKPERAPPACPFKPPANRAEAD 60

Query: 61 XXXXXXXXXXXXVKPESVNVKED 83
                      VKP +V+VK+D
Sbjct: 61 ----VEPVPADPVKPGNVDVKQD 79


>Glyma13g20430.3 
          Length = 79

 Score =  106 bits (264), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 54/83 (65%), Positives = 61/83 (73%), Gaps = 4/83 (4%)

Query: 1  MVCVACLLPLFLVPIINLLPLLFDFLMAKIYRVFGWEYRKPERAPPACPYKPSANGVSKQ 60
          MVC+ACLLPLFLVPI+N+LPLL+ F+M KIYRVFGWEYRKPERAPP CPYKP  N V   
Sbjct: 1  MVCLACLLPLFLVPIVNILPLLYYFIMGKIYRVFGWEYRKPERAPPVCPYKPPTNRVEAD 60

Query: 61 XXXXXXXXXXXXVKPESVNVKED 83
                      VKP SV+VK+D
Sbjct: 61 ----VEPVPADPVKPGSVDVKQD 79


>Glyma13g20430.2 
          Length = 56

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/57 (63%), Positives = 38/57 (66%), Gaps = 1/57 (1%)

Query: 27 MAKIYRVFGWEYRKPERAPPACPYKPSANGVSKQXXXXXXXXXXXXVKPESVNVKED 83
          M KIYRVFGWEYRKPERAPP CPYKP  N VSK             VKP SV+VK+D
Sbjct: 1  MGKIYRVFGWEYRKPERAPPVCPYKPPTNRVSK-VEADVEPVPADPVKPGSVDVKQD 56