Miyakogusa Predicted Gene

Lj5g3v0626660.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0626660.1 Non Chatacterized Hit- tr|B9SGP8|B9SGP8_RICCO
DNA-binding protein S1FA, putative OS=Ricinus
communis,71.23,0.0000000000005,seg,NULL; S1FA,DNA binding protein
S1FA,CUFF.53558.1
         (76 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma03g33640.1                                                        49   1e-06
Glyma19g36350.1                                                        49   2e-06

>Glyma03g33640.1 
          Length = 89

 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 35/74 (47%)

Query: 3  DDVGNGINDSGSKGINPXXXXXXXXXXXXXXXXXXNYVLYIYAQKTLPPRXXXXXXXXXX 62
          D VGN I DSGSKG NP                  NYVLY YAQKTLPPR          
Sbjct: 16 DRVGNVIKDSGSKGFNPGLIVLLVVGGLLLTFLIGNYVLYSYAQKTLPPRKKKPVSKKKM 75

Query: 63 XXXXXXQGISAPGE 76
                QG+SAPGE
Sbjct: 76 KKERLKQGVSAPGE 89


>Glyma19g36350.1 
          Length = 89

 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 34/74 (45%)

Query: 3  DDVGNGINDSGSKGINPXXXXXXXXXXXXXXXXXXNYVLYIYAQKTLPPRXXXXXXXXXX 62
          D VGN I DSGSK  NP                  NYVLY YAQKTLPPR          
Sbjct: 16 DRVGNVIKDSGSKAFNPGLIVLLVVGGLLLTFLIGNYVLYTYAQKTLPPRKKKPVSKKKM 75

Query: 63 XXXXXXQGISAPGE 76
                QG+SAPGE
Sbjct: 76 KKERLKQGVSAPGE 89