Miyakogusa Predicted Gene

Lj5g3v0626540.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0626540.1 Non Chatacterized Hit- tr|D8SL01|D8SL01_SELML
Putative uncharacterized protein OS=Selaginella
moelle,31.67,0.0000000000002,seg,NULL; coiled-coil,NULL,CUFF.53543.1
         (354 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g05760.1                                                       313   1e-85
Glyma13g20120.1                                                       234   9e-62
Glyma19g36310.1                                                        74   3e-13
Glyma03g33600.1                                                        71   2e-12
Glyma04g06460.1                                                        57   4e-08
Glyma06g06500.1                                                        52   8e-07

>Glyma10g05760.1 
          Length = 402

 Score =  313 bits (803), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 184/280 (65%), Positives = 201/280 (71%), Gaps = 18/280 (6%)

Query: 93  PEGNSLFSLGLSFGIMFMMSARKAEIDELNKTMDETAKLVQELKSELNRRKSSRAHENLD 152
           P  +SLF  GL  GIM MMSA KAEI++LNKTMDETAKLVQELKSELNRRKSS A +NLD
Sbjct: 123 PSDDSLFGRGLCSGIMCMMSAGKAEINKLNKTMDETAKLVQELKSELNRRKSSHALQNLD 182

Query: 153 SVGNSDMNSRKMSGRHELMLTKTNSELR------------DSGECGSSTLTEESEPGVLE 200
           SVGN   NS K+SGR+E+ML KTNSELR            D GECGSS LTEE EP VLE
Sbjct: 183 SVGNGVTNSCKISGRNEVMLKKTNSELRDVDVKIWSPCVNDCGECGSSALTEEPEPQVLE 242

Query: 201 MDQLEAELEFELQKLSGCTIDSHRHEEIKPELEKLDSDGTDDWD-FNYSQSHGVSASELN 259
           MDQLEAELEFELQKLSG  +       I        +  +  +   +   +HGVSASEL+
Sbjct: 243 MDQLEAELEFELQKLSGALVAFFLLLWIFFLSNLFINHSSCMFALISLISNHGVSASELH 302

Query: 260 QKLSQLLIKQQEDQITELESELHQAQSKLHEKEAELQALKDCVKRLTELSLSAVSDDETQ 319
           QKLS LLIKQQE+QI ELESELHQAQS LHEKEAELQALKDCVKRLTELSLS VSDDE Q
Sbjct: 303 QKLSHLLIKQQENQIMELESELHQAQSNLHEKEAELQALKDCVKRLTELSLSTVSDDEAQ 362

Query: 320 TL-----ISDCDNNNAESKSKQSVLRAKRPLDSESGLCYM 354
            L      SD  NNN  S+SK SV+  KRPLDSES  CYM
Sbjct: 363 VLSDPKGTSDYGNNNMHSESKHSVIGTKRPLDSESFSCYM 402


>Glyma13g20120.1 
          Length = 219

 Score =  234 bits (597), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 139/218 (63%), Positives = 150/218 (68%), Gaps = 34/218 (15%)

Query: 108 MFMMSARKAEIDELNKTMDETAKLVQELKSELNRRKSSRAHENLDSVGNSDMNSRKMSGR 167
           M+MMSA KAEI++LNKTMDETAKLVQELKSELNRRKSS A + LDSVGN   NS K+SGR
Sbjct: 1   MYMMSAGKAEINKLNKTMDETAKLVQELKSELNRRKSSHALQILDSVGNGVKNSCKISGR 60

Query: 168 HELMLTKTNSELRD------------SGECGSSTLTEESEPGVLEMDQLEAELEFELQKL 215
           +E+ML  TN ELRD             GECGSS LTEE EP VLEMDQLEAELEFELQKL
Sbjct: 61  NEVMLKNTNIELRDVDVKICSPCVNDCGECGSSALTEEPEPQVLEMDQLEAELEFELQKL 120

Query: 216 SGCTIDSHRHEEIKPELEKLDSDGTDDWDFNYSQSHGVSASELNQKLSQLLIKQQEDQIT 275
           SG  +                                  ASEL+QKLS LLIKQQE+QI 
Sbjct: 121 SGLVV----------------------CRMQIVVCCQFYASELHQKLSHLLIKQQENQIA 158

Query: 276 ELESELHQAQSKLHEKEAELQALKDCVKRLTELSLSAV 313
           ELESELHQAQS LHEKEAELQALKDCVK LTELSLS +
Sbjct: 159 ELESELHQAQSNLHEKEAELQALKDCVKCLTELSLSTM 196


>Glyma19g36310.1 
          Length = 119

 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/77 (55%), Positives = 49/77 (63%), Gaps = 17/77 (22%)

Query: 238 DGTDDWDFNYSQSHGVSASELNQKLSQLLIKQQEDQITELESELHQAQSKLHEKEAELQA 297
           D  DD +FN SQ HGVS SELNQKL QLLI+QQ++QI                 EAELQA
Sbjct: 46  DRIDDLNFNSSQYHGVSPSELNQKLCQLLIEQQKNQI-----------------EAELQA 88

Query: 298 LKDCVKRLTELSLSAVS 314
           LK+CV  L+EL LS VS
Sbjct: 89  LKNCVALLSELPLSTVS 105


>Glyma03g33600.1 
          Length = 54

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 38/52 (73%), Positives = 45/52 (86%)

Query: 263 SQLLIKQQEDQITELESELHQAQSKLHEKEAELQALKDCVKRLTELSLSAVS 314
           SQLLI+QQ++QI ELESEL+ AQSKL EKEAELQALK+C+  L+EL LS VS
Sbjct: 1   SQLLIEQQKNQIAELESELNVAQSKLQEKEAELQALKNCITLLSELPLSTVS 52


>Glyma04g06460.1 
          Length = 378

 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 110/231 (47%), Gaps = 22/231 (9%)

Query: 99  FSLGLSFGIMFMMSARKAEIDELNKTMDETAKLVQELKSELNRRKSS-RAHENLDSVGNS 157
           F LG+  G++++++A K E+ ++ +   E   L+Q  K EL  + +  +  +  D++  S
Sbjct: 123 FKLGVGCGLLYLIAASKNELGKMVELRKEMEMLLQNAKGELQSKDALLKPLKQSDALALS 182

Query: 158 DMNSRKMSGRHELMLTKTNSEL---RDSGECGSSTLTE----ESEPGVLEMDQLEAELEF 210
             + +++S     +   +N++       G+   +   E    E +    E+++L+AE E 
Sbjct: 183 ITDIQEVSSSSSHLSIHSNTQYVQPESKGDMVPNCFLEYNISEQDECAEEINELQAEFEI 242

Query: 211 ELQKL-----SGCTIDSHRHEEIKPELEKLDSDGT---------DDWDFNYSQSHGVSAS 256
           ELQ+L          D  +HE +K  L+   S            +    NY  S GV   
Sbjct: 243 ELQRLQMYLDGEAGFDDAQHEGVKVALDDSSSKSHSSSFGEIIMEPQRANYDVSFGVPPI 302

Query: 257 ELNQKLSQLLIKQQEDQITELESELHQAQSKLHEKEAELQALKDCVKRLTE 307
           EL +KL +LL  + E++ITELES L     KL +KE E+   KD  + +++
Sbjct: 303 ELERKLHELLEARLEERITELESALECTTQKLIKKEIEVTWWKDTAQLISQ 353


>Glyma06g06500.1 
          Length = 429

 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 34/242 (14%)

Query: 94  EGNSLFSLGLSFGIMFMMSARKAEIDELNKTMDETAKLVQELKSELNRRKSS-RAHENLD 152
           E ++ F LG+  G++++++A K E+ ++ +   E   L+Q  K EL  + S  +  +  D
Sbjct: 146 ESDTSFKLGVGCGLLYLIAASKNELSKMIELQKEMEMLLQNAKGELQSKDSLLKPLKQSD 205

Query: 153 SVGNSDMNSRKMSGRHELMLTKTNSELRDSGECGSSTL--------TEESEPGVLEMDQL 204
           ++  S  + +++S     +   +N +     E  S T+        T E +    E+++L
Sbjct: 206 TLALSITDIQEVSSSSSHLSIHSNIQYVQP-ESKSDTVPNRFLEYNTSEQDECAEEINEL 264

Query: 205 EAELEFELQKL-----SGCTIDSHRHEEIKPELEK--------------LDSDGTDDWDF 245
            AE E ELQ+L          D  + E +K  LE               ++  G      
Sbjct: 265 RAEFEIELQRLQLYLDGEAGFDDAQQEGVKVTLEDSSSKSHSSSFGEIIMEPQGA----- 319

Query: 246 NYSQSHGVSASELNQKLSQLLIKQQEDQITELESELHQAQSKLHEKEAELQALKDCVKRL 305
            Y  S GV   EL ++L +LL  + E++I+ELES L     KL +KE E+   KD  + +
Sbjct: 320 TYDVSFGVPPIELERRLHELLEARLEERISELESALECKTQKLIKKEIEVTWWKDTAQLI 379

Query: 306 TE 307
           ++
Sbjct: 380 SQ 381