Miyakogusa Predicted Gene

Lj5g3v0615420.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0615420.1 tr|I0YSF8|I0YSF8_9CHLO Alternative oxidase
OS=Coccomyxa subellipsoidea C-169 PE=3
SV=1,30.83,0.00001,seg,NULL,CUFF.53439.1
         (267 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g19770.1                                                       328   2e-90
Glyma10g05400.1                                                       315   3e-86
Glyma13g19770.2                                                       296   2e-80
Glyma19g36000.1                                                       262   3e-70
Glyma03g33280.1                                                       251   4e-67
Glyma03g33280.2                                                       243   2e-64

>Glyma13g19770.1 
          Length = 218

 Score =  328 bits (842), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 156/218 (71%), Positives = 172/218 (78%)

Query: 48  MMSLPNSRVSVAIFLSFIFFTSFPGLMLCAVVSLNSIEVFRTHEWLKATSTVYFLCTEEN 107
           M  +PNSRV + +F+S IFFTSFPGL   A+VSL SIE+F+THEWLKAT+TVYFLC  EN
Sbjct: 1   MSLMPNSRVPLLLFISSIFFTSFPGLTFGAIVSLRSIEIFKTHEWLKATTTVYFLCKGEN 60

Query: 108 KTVLPDVKRPHVFYSFNGNESWQPLSSFSSKKCKRCGLYEEDSITSDDVFEEWEFCPSDF 167
           +TVLPDVK+PH  Y+FNG ESWQPLSSFSSKKCKRCG YEEDSITSDD F+EWEFCPSDF
Sbjct: 61  ETVLPDVKKPHAIYAFNGQESWQPLSSFSSKKCKRCGFYEEDSITSDDAFDEWEFCPSDF 120

Query: 168 TGPDGEYNRFKEKEFNATFLCQECLSLAGVSSSSDGKGMHXXXXXXXXXXXXXXXXXGVM 227
             P+GEY RFKEKEFNATFLC ECLSLAGV    DGKGMH                 GV+
Sbjct: 121 AAPNGEYIRFKEKEFNATFLCPECLSLAGVDEHDDGKGMHIAVVVLLSILVSVTLILGVV 180

Query: 228 GAYKFWLKKIREQDQTRLLKLFEDGDYMEDELGLGSAI 265
           GAYKFW KK+REQDQ RLLKLFED D + DELGLGSAI
Sbjct: 181 GAYKFWRKKLREQDQARLLKLFEDDDDIGDELGLGSAI 218


>Glyma10g05400.1 
          Length = 228

 Score =  315 bits (807), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 152/212 (71%), Positives = 167/212 (78%)

Query: 54  SRVSVAIFLSFIFFTSFPGLMLCAVVSLNSIEVFRTHEWLKATSTVYFLCTEENKTVLPD 113
           +RV + +F+S +FFTSFPGL L AVVSL SIE+F+THEWLKAT+TVYFLC  EN TVL D
Sbjct: 17  TRVPLLLFISLMFFTSFPGLTLGAVVSLRSIEIFKTHEWLKATTTVYFLCKGENMTVLLD 76

Query: 114 VKRPHVFYSFNGNESWQPLSSFSSKKCKRCGLYEEDSITSDDVFEEWEFCPSDFTGPDGE 173
           VKRPH  Y+FNG ESWQPLS+FSSKKCKRCGLYEEDSIT DDVF+EWEFCPSDF  PDGE
Sbjct: 77  VKRPHAIYAFNGQESWQPLSNFSSKKCKRCGLYEEDSITLDDVFDEWEFCPSDFAAPDGE 136

Query: 174 YNRFKEKEFNATFLCQECLSLAGVSSSSDGKGMHXXXXXXXXXXXXXXXXXGVMGAYKFW 233
           Y RFKEKEFNATFLC ECLSLAGV    DGKGMH                 GV+GA KFW
Sbjct: 137 YIRFKEKEFNATFLCPECLSLAGVDEHDDGKGMHIAVVVLLSVLVSIILILGVVGAIKFW 196

Query: 234 LKKIREQDQTRLLKLFEDGDYMEDELGLGSAI 265
            KK+REQD+ RLLKLFED D + DELGLGSAI
Sbjct: 197 RKKLREQDRARLLKLFEDDDDIGDELGLGSAI 228


>Glyma13g19770.2 
          Length = 211

 Score =  296 bits (757), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 140/193 (72%), Positives = 152/193 (78%)

Query: 73  LMLCAVVSLNSIEVFRTHEWLKATSTVYFLCTEENKTVLPDVKRPHVFYSFNGNESWQPL 132
           L   A+VSL SIE+F+THEWLKAT+TVYFLC  EN+TVLPDVK+PH  Y+FNG ESWQPL
Sbjct: 19  LTFGAIVSLRSIEIFKTHEWLKATTTVYFLCKGENETVLPDVKKPHAIYAFNGQESWQPL 78

Query: 133 SSFSSKKCKRCGLYEEDSITSDDVFEEWEFCPSDFTGPDGEYNRFKEKEFNATFLCQECL 192
           SSFSSKKCKRCG YEEDSITSDD F+EWEFCPSDF  P+GEY RFKEKEFNATFLC ECL
Sbjct: 79  SSFSSKKCKRCGFYEEDSITSDDAFDEWEFCPSDFAAPNGEYIRFKEKEFNATFLCPECL 138

Query: 193 SLAGVSSSSDGKGMHXXXXXXXXXXXXXXXXXGVMGAYKFWLKKIREQDQTRLLKLFEDG 252
           SLAGV    DGKGMH                 GV+GAYKFW KK+REQDQ RLLKLFED 
Sbjct: 139 SLAGVDEHDDGKGMHIAVVVLLSILVSVTLILGVVGAYKFWRKKLREQDQARLLKLFEDD 198

Query: 253 DYMEDELGLGSAI 265
           D + DELGLGSAI
Sbjct: 199 DDIGDELGLGSAI 211


>Glyma19g36000.1 
          Length = 223

 Score =  262 bits (669), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 126/206 (61%), Positives = 151/206 (73%), Gaps = 8/206 (3%)

Query: 68  TSFPGLMLCAVVSLNSIEVFRTHEWLKATSTVYFLCTEENKTVLPDVKRPHVFYSFNGNE 127
           T FPGL++ A V+L+SIE+F THE+LKAT TVYFLC  +NKT LPD+K+PHVFYSF G E
Sbjct: 18  TYFPGLIISADVTLSSIEIFTTHEFLKATPTVYFLCKGDNKTQLPDIKKPHVFYSFKGEE 77

Query: 128 SWQPLSSFSSKKCKRCGLYEEDSITSDDVFEEWEFCPSDFTGPDGEYNRFKEKEFNATFL 187
           SWQPL++FS KKCKRCG+YEED   SDDVF+ WEFCPSDFT PDG Y  FKEKEFNA+FL
Sbjct: 78  SWQPLTNFSGKKCKRCGIYEEDKFLSDDVFDVWEFCPSDFTTPDGRYVHFKEKEFNASFL 137

Query: 188 CQECLSLAGVSSSS--------DGKGMHXXXXXXXXXXXXXXXXXGVMGAYKFWLKKIRE 239
           C ECLS +G S S+        + KGM+                 G++GAYK+W K+ RE
Sbjct: 138 CPECLSFSGASVSAPPVENHNPNKKGMNVAVIILLSILGSTILILGMLGAYKYWQKRKRE 197

Query: 240 QDQTRLLKLFEDGDYMEDELGLGSAI 265
           QDQ R LKLFE+GD +EDELGLG+ I
Sbjct: 198 QDQARFLKLFEEGDDIEDELGLGTII 223


>Glyma03g33280.1 
          Length = 221

 Score =  251 bits (642), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 122/203 (60%), Positives = 148/203 (72%), Gaps = 9/203 (4%)

Query: 71  PGLMLCAVVSLNSIEVFRTHEWLKATSTVYFLCTEENKTVLPDVKRPHVFYSFNGNESWQ 130
           PGL++ A ++L+SIE+F THE LKAT TVYFLC  +NKT LPD+K+PH+ YSF G ESWQ
Sbjct: 20  PGLIISADMTLSSIEIFTTHELLKATPTVYFLCKGDNKTELPDIKKPHLLYSFKGEESWQ 79

Query: 131 PLSSFSSKKCKRCGLYEEDSITSDDVFEEWEFCPSDFTGPDGEYNRFKEKEFNATFLCQE 190
           PL++FS KKCKRCG+YEED I SDDVF+EWE CPSDFT PDG Y  FKEKEFNA+FLC E
Sbjct: 80  PLTNFSGKKCKRCGIYEED-IFSDDVFDEWELCPSDFTTPDGRYAHFKEKEFNASFLCPE 138

Query: 191 CLSLAGVSSSS--------DGKGMHXXXXXXXXXXXXXXXXXGVMGAYKFWLKKIREQDQ 242
           CLS +GVS S+        + KGM+                 G++G YK+W K+ REQDQ
Sbjct: 139 CLSFSGVSVSAPPAENDNPNKKGMNVAVIILLSILGSTILILGMLGTYKYWQKRKREQDQ 198

Query: 243 TRLLKLFEDGDYMEDELGLGSAI 265
            R LKLFE+GD +EDELGLG+ I
Sbjct: 199 ARFLKLFEEGDDIEDELGLGTII 221


>Glyma03g33280.2 
          Length = 194

 Score =  243 bits (619), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 118/195 (60%), Positives = 142/195 (72%), Gaps = 9/195 (4%)

Query: 79  VSLNSIEVFRTHEWLKATSTVYFLCTEENKTVLPDVKRPHVFYSFNGNESWQPLSSFSSK 138
           ++L+SIE+F THE LKAT TVYFLC  +NKT LPD+K+PH+ YSF G ESWQPL++FS K
Sbjct: 1   MTLSSIEIFTTHELLKATPTVYFLCKGDNKTELPDIKKPHLLYSFKGEESWQPLTNFSGK 60

Query: 139 KCKRCGLYEEDSITSDDVFEEWEFCPSDFTGPDGEYNRFKEKEFNATFLCQECLSLAGVS 198
           KCKRCG+YEED I SDDVF+EWE CPSDFT PDG Y  FKEKEFNA+FLC ECLS +GVS
Sbjct: 61  KCKRCGIYEED-IFSDDVFDEWELCPSDFTTPDGRYAHFKEKEFNASFLCPECLSFSGVS 119

Query: 199 SSS--------DGKGMHXXXXXXXXXXXXXXXXXGVMGAYKFWLKKIREQDQTRLLKLFE 250
            S+        + KGM+                 G++G YK+W K+ REQDQ R LKLFE
Sbjct: 120 VSAPPAENDNPNKKGMNVAVIILLSILGSTILILGMLGTYKYWQKRKREQDQARFLKLFE 179

Query: 251 DGDYMEDELGLGSAI 265
           +GD +EDELGLG+ I
Sbjct: 180 EGDDIEDELGLGTII 194