Miyakogusa Predicted Gene

Lj5g3v0614530.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0614530.1 tr|B1XK02|B1XK02_SYNP2 Arginine biosynthesis
bifunctional protein ArgJ OS=Synechococcus sp. (strain
,42.21,3e-19,Q9ZUR7_ARATH_Q9ZUR7;,Arginine biosynthesis protein ArgJ;
seg,NULL; DmpA/ArgJ-like,Peptidase S58 DmpA,gene.g59322.t1.1
         (175 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma10g05090.1                                                       144   7e-35
Glyma13g19450.1                                                       143   8e-35
Glyma13g19450.2                                                        84   1e-16
Glyma0091s00210.1                                                      60   1e-09
Glyma09g16520.1                                                        59   2e-09
Glyma20g05100.1                                                        58   5e-09

>Glyma10g05090.1 
          Length = 430

 Score =  144 bits (362), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 86/160 (53%), Positives = 88/160 (55%), Gaps = 53/160 (33%)

Query: 25  LVGGTKVRVGGMAKGSGMIHPNMATMLGV-----------------------------DG 55
           LVGGT+VRVGGMAKGSGMIHPNMATMLGV                             DG
Sbjct: 189 LVGGTRVRVGGMAKGSGMIHPNMATMLGVITTDAWVTSDVWRKMVQVAVNRSFNQITVDG 248

Query: 56  DTSTNDTVXXXXXXXXXXXXXXXXXXXEAIQLQACLDAVMQGLAKSIAWDGEGATCLIE- 114
           DTSTNDTV                   EAIQLQACLDAVMQGLAKSIAWDGEGATCL+E 
Sbjct: 249 DTSTNDTVIALASGLSGLGCISSLDSDEAIQLQACLDAVMQGLAKSIAWDGEGATCLVEV 308

Query: 115 -----------------------AAVYGRDPNWGRIAAAA 131
                                  AAVYGRDPNWGRIAAAA
Sbjct: 309 SVTGANSEAEAAKVARSVASSSLAAVYGRDPNWGRIAAAA 348


>Glyma13g19450.1 
          Length = 464

 Score =  143 bits (361), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 85/162 (52%), Positives = 88/162 (54%), Gaps = 55/162 (33%)

Query: 25  LVGGTKVRVGGMAKGSGMIHPNMATMLGV-----------------------------DG 55
           L+GGTKVRVGGMAKGSGMIHPNMATMLGV                             DG
Sbjct: 221 LIGGTKVRVGGMAKGSGMIHPNMATMLGVITTDARLTSDVWRKMVQVAVNRSFNQITVDG 280

Query: 56  DTSTNDTVXXXXXXXXXXXXXXXXXXXEAIQLQACLDAVMQGLAKSIAWDGEGATCLIE- 114
           DTSTNDTV                   EAIQLQACLDAVMQGLAKSIAWDGEGATCL+E 
Sbjct: 281 DTSTNDTVIALASGLSGLGCISSLDSDEAIQLQACLDAVMQGLAKSIAWDGEGATCLVEV 340

Query: 115 -------------------------AAVYGRDPNWGRIAAAA 131
                                    AA+YGRDPNWGRIAAAA
Sbjct: 341 CVTGANSEAEAAKVARSVASSSLVKAAIYGRDPNWGRIAAAA 382


>Glyma13g19450.2 
          Length = 371

 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/99 (50%), Positives = 51/99 (51%), Gaps = 29/99 (29%)

Query: 25  LVGGTKVRVGGMAKGSGMIHPNMATMLG-----------------------------VDG 55
           L+GGTKVRVGGMAKGSGMIHPNMATMLG                             VDG
Sbjct: 221 LIGGTKVRVGGMAKGSGMIHPNMATMLGVITTDARLTSDVWRKMVQVAVNRSFNQITVDG 280

Query: 56  DTSTNDTVXXXXXXXXXXXXXXXXXXXEAIQLQACLDAV 94
           DTSTNDTV                   EAIQLQACLDAV
Sbjct: 281 DTSTNDTVIALASGLSGLGCISSLDSDEAIQLQACLDAV 319


>Glyma0091s00210.1 
          Length = 149

 Score = 60.5 bits (145), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 27/29 (93%), Positives = 29/29 (100%)

Query: 25 LVGGTKVRVGGMAKGSGMIHPNMATMLGV 53
          LVGGTK++VGGMAKGSGMIHPNMATMLGV
Sbjct: 45 LVGGTKLKVGGMAKGSGMIHPNMATMLGV 73


>Glyma09g16520.1 
          Length = 190

 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/29 (89%), Positives = 29/29 (100%)

Query: 26  VGGTKVRVGGMAKGSGMIHPNMATMLGVD 54
           VGGTK++VGGMAKGSGMIHPNMATMLG+D
Sbjct: 106 VGGTKLKVGGMAKGSGMIHPNMATMLGMD 134


>Glyma20g05100.1 
          Length = 27

 Score = 58.2 bits (139), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/27 (100%), Positives = 27/27 (100%)

Query: 26 VGGTKVRVGGMAKGSGMIHPNMATMLG 52
          VGGTKVRVGGMAKGSGMIHPNMATMLG
Sbjct: 1  VGGTKVRVGGMAKGSGMIHPNMATMLG 27