Miyakogusa Predicted Gene

Lj5g3v0614510.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0614510.1 tr|Q075K5|Q075K5_PROWI Plastid ArgJ (Fragment)
OS=Prototheca wickerhamii PE=2 SV=1,56.98,3e-18,ArgJ,Arginine
biosynthesis protein ArgJ; Q3C251_CITLA_Q3C251;,Arginine biosynthesis
protein ArgJ; Dm,gene.g59320.t1.1
         (131 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma13g19450.2                                                       194   1e-50
Glyma13g19450.1                                                       194   2e-50
Glyma10g05090.1                                                       172   7e-44

>Glyma13g19450.2 
          Length = 371

 Score =  194 bits (494), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 99/128 (77%), Positives = 108/128 (84%), Gaps = 10/128 (7%)

Query: 1   MYSCVVVPHPIFLH---KTSLNPKIFTS----MRIRAMSNQPSTYIPAAPIFLPEGPWNQ 53
           MYSC+  P  +FLH    +S NPK F S    +RIRA+S + + +IPAAPIFLPEGPWNQ
Sbjct: 1   MYSCI--PQHLFLHLHLASSPNPKAFNSPLRNLRIRAVSTKEN-HIPAAPIFLPEGPWNQ 57

Query: 54  IPGGVTAAEGFKAAGMYGGLRAVGEKPDLALVTCDVDAVSAGSFTTNVVAAAPVLYCKKT 113
           IPGGVTAAEGFKAAGMYGGLRA GEKPDLALVTCDVDAVSAGSFTTNVVAAAPVLYCK+T
Sbjct: 58  IPGGVTAAEGFKAAGMYGGLRAKGEKPDLALVTCDVDAVSAGSFTTNVVAAAPVLYCKRT 117

Query: 114 LDISNTVR 121
           LDISNT R
Sbjct: 118 LDISNTAR 125


>Glyma13g19450.1 
          Length = 464

 Score =  194 bits (494), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 99/128 (77%), Positives = 108/128 (84%), Gaps = 10/128 (7%)

Query: 1   MYSCVVVPHPIFLH---KTSLNPKIFTS----MRIRAMSNQPSTYIPAAPIFLPEGPWNQ 53
           MYSC+  P  +FLH    +S NPK F S    +RIRA+S + + +IPAAPIFLPEGPWNQ
Sbjct: 1   MYSCI--PQHLFLHLHLASSPNPKAFNSPLRNLRIRAVSTKEN-HIPAAPIFLPEGPWNQ 57

Query: 54  IPGGVTAAEGFKAAGMYGGLRAVGEKPDLALVTCDVDAVSAGSFTTNVVAAAPVLYCKKT 113
           IPGGVTAAEGFKAAGMYGGLRA GEKPDLALVTCDVDAVSAGSFTTNVVAAAPVLYCK+T
Sbjct: 58  IPGGVTAAEGFKAAGMYGGLRAKGEKPDLALVTCDVDAVSAGSFTTNVVAAAPVLYCKRT 117

Query: 114 LDISNTVR 121
           LDISNT R
Sbjct: 118 LDISNTAR 125


>Glyma10g05090.1 
          Length = 430

 Score =  172 bits (437), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 83/94 (88%), Positives = 88/94 (93%), Gaps = 1/94 (1%)

Query: 28  IRAMSNQPSTYIPAAPIFLPEGPWNQIPGGVTAAEGFKAAGMYGGLRAVGEKPDLALVTC 87
           IRA+S   + +IPAAP+FLPEGPWNQIPGGVTAAEGFKAAGMYGGLRA GEKPDLALVTC
Sbjct: 1   IRAVSTTHN-HIPAAPVFLPEGPWNQIPGGVTAAEGFKAAGMYGGLRAKGEKPDLALVTC 59

Query: 88  DVDAVSAGSFTTNVVAAAPVLYCKKTLDISNTVR 121
           DVDAVSAGSFTTNVVAAAPVLYCK+TLDISNT R
Sbjct: 60  DVDAVSAGSFTTNVVAAAPVLYCKRTLDISNTAR 93