Miyakogusa Predicted Gene
- Lj5g3v0575450.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0575450.1 tr|F2CX82|F2CX82_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,41.33,5e-16,FAMILY NOT
NAMED,NULL,CUFF.53334.1
(405 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma08g03550.2 188 8e-48
Glyma08g03550.1 188 9e-48
Glyma05g36070.2 186 4e-47
Glyma05g36070.1 185 6e-47
Glyma04g09230.1 137 3e-32
Glyma06g09360.1 135 6e-32
Glyma01g41140.1 79 6e-15
Glyma11g04290.1 79 6e-15
Glyma10g20860.1 63 5e-10
>Glyma08g03550.2
Length = 1209
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 103/161 (63%), Positives = 111/161 (68%), Gaps = 2/161 (1%)
Query: 8 VIVHLWLNPKMFMDAKHGSIVQISFFEASNLQVLKDSSLIHSNANLGVRGQSFLNLSELG 67
V +HL LN KM +DA IV S EASNL VLKDSS+IHSNANLGV GQ FLNLS G
Sbjct: 203 VKIHLMLNSKMLIDANGDRIVATSLLEASNLVVLKDSSVIHSNANLGVHGQGFLNLSGAG 262
Query: 68 NLIEAQHLILSLLTNSKVGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCN 127
NLIEAQHLILSL + VG VLRGPLE SG+D M QLY E+EN VEL HPPE CN
Sbjct: 263 NLIEAQHLILSLFYSINVGPGSVLRGPLEASGDD--MTPQLYCEVENCPVELLHPPEDCN 320
Query: 128 KNSSWILTLQICRVEIAIVEVATTGSGLRFPWIRRLSVEVS 168
NSS TLQICRVE IVE TGS + F WIR + V S
Sbjct: 321 VNSSLAFTLQICRVEDVIVEGTITGSVVHFHWIRNIDVSYS 361
>Glyma08g03550.1
Length = 1230
Score = 188 bits (478), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 103/161 (63%), Positives = 111/161 (68%), Gaps = 2/161 (1%)
Query: 8 VIVHLWLNPKMFMDAKHGSIVQISFFEASNLQVLKDSSLIHSNANLGVRGQSFLNLSELG 67
V +HL LN KM +DA IV S EASNL VLKDSS+IHSNANLGV GQ FLNLS G
Sbjct: 203 VKIHLMLNSKMLIDANGDRIVATSLLEASNLVVLKDSSVIHSNANLGVHGQGFLNLSGAG 262
Query: 68 NLIEAQHLILSLLTNSKVGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCN 127
NLIEAQHLILSL + VG VLRGPLE SG+D M QLY E+EN VEL HPPE CN
Sbjct: 263 NLIEAQHLILSLFYSINVGPGSVLRGPLEASGDD--MTPQLYCEVENCPVELLHPPEDCN 320
Query: 128 KNSSWILTLQICRVEIAIVEVATTGSGLRFPWIRRLSVEVS 168
NSS TLQICRVE IVE TGS + F WIR + V S
Sbjct: 321 VNSSLAFTLQICRVEDVIVEGTITGSVVHFHWIRNIDVSYS 361
>Glyma05g36070.2
Length = 1372
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 102/161 (63%), Positives = 110/161 (68%), Gaps = 2/161 (1%)
Query: 8 VIVHLWLNPKMFMDAKHGSIVQISFFEASNLQVLKDSSLIHSNANLGVRGQSFLNLSELG 67
V +HL LN KM +DA IV S EASNL VLKDSS+IHSNANLGV GQ LNLS G
Sbjct: 434 VKIHLMLNSKMLIDANGDQIVATSLLEASNLVVLKDSSVIHSNANLGVHGQGSLNLSGAG 493
Query: 68 NLIEAQHLILSLLTNSKVGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCN 127
NLIEAQHLILSL + VG VLRGPLE SG+D M QLY E+EN VEL HPPE CN
Sbjct: 494 NLIEAQHLILSLFFSINVGPGSVLRGPLEASGDD--MTPQLYCEVENCPVELLHPPEDCN 551
Query: 128 KNSSWILTLQICRVEIAIVEVATTGSGLRFPWIRRLSVEVS 168
NSS TLQICRVE IVE TGS + F WIR + V S
Sbjct: 552 VNSSLAFTLQICRVEDVIVEGTITGSVVHFHWIRNIDVSYS 592
>Glyma05g36070.1
Length = 1437
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 102/161 (63%), Positives = 110/161 (68%), Gaps = 2/161 (1%)
Query: 8 VIVHLWLNPKMFMDAKHGSIVQISFFEASNLQVLKDSSLIHSNANLGVRGQSFLNLSELG 67
V +HL LN KM +DA IV S EASNL VLKDSS+IHSNANLGV GQ LNLS G
Sbjct: 434 VKIHLMLNSKMLIDANGDQIVATSLLEASNLVVLKDSSVIHSNANLGVHGQGSLNLSGAG 493
Query: 68 NLIEAQHLILSLLTNSKVGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCN 127
NLIEAQHLILSL + VG VLRGPLE SG+D M QLY E+EN VEL HPPE CN
Sbjct: 494 NLIEAQHLILSLFFSINVGPGSVLRGPLEASGDD--MTPQLYCEVENCPVELLHPPEDCN 551
Query: 128 KNSSWILTLQICRVEIAIVEVATTGSGLRFPWIRRLSVEVS 168
NSS TLQICRVE IVE TGS + F WIR + V S
Sbjct: 552 VNSSLAFTLQICRVEDVIVEGTITGSVVHFHWIRNIDVSYS 592
>Glyma04g09230.1
Length = 1407
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 99/161 (61%), Gaps = 1/161 (0%)
Query: 8 VIVHLWLNPKMFMDAKHGSIVQISFFEASNLQVLKDSSLIHSNANLGVRGQSFLNLSELG 67
V + L N KM +D V S EASNL VL+ +S+IHSNANLGV GQ LNLS G
Sbjct: 407 VKMFLMWNSKMLIDGGEDITVATSLLEASNLIVLRGASVIHSNANLGVHGQGLLNLSGPG 466
Query: 68 NLIEAQHLILSLLTNSKVGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCN 127
+ IEAQ L+LSL + VG VLRGPLE + D+ + +LY + E+ EL HPPE CN
Sbjct: 467 DWIEAQRLVLSLFYSIHVGPGSVLRGPLENATTDD-VTPKLYCDKEDCPYELLHPPEDCN 525
Query: 128 KNSSWILTLQICRVEIAIVEVATTGSGLRFPWIRRLSVEVS 168
NSS TLQICRVE +VE GS + F R +SVE S
Sbjct: 526 VNSSLSFTLQICRVEDILVEGLIKGSVVHFHRARTISVESS 566
>Glyma06g09360.1
Length = 1271
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 98/161 (60%), Gaps = 1/161 (0%)
Query: 8 VIVHLWLNPKMFMDAKHGSIVQISFFEASNLQVLKDSSLIHSNANLGVRGQSFLNLSELG 67
V + L N KM +D V S EASNL VL+ +S+IHSNANLGV GQ LNLS G
Sbjct: 318 VKMFLMWNSKMLIDGGEDVTVATSLLEASNLIVLRGASVIHSNANLGVHGQGLLNLSGPG 377
Query: 68 NLIEAQHLILSLLTNSKVGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCN 127
+ IEAQ L+LSL + VG VLRGPLE + D+ + +LY E+ EL HPPE CN
Sbjct: 378 DWIEAQRLVLSLFYSIHVGPGSVLRGPLENATTDD-VTPKLYCNNEDCPYELLHPPEDCN 436
Query: 128 KNSSWILTLQICRVEIAIVEVATTGSGLRFPWIRRLSVEVS 168
NSS TLQICRVE +VE GS + F R +SVE S
Sbjct: 437 VNSSLSFTLQICRVEDILVEGLIKGSVVHFHRARTISVESS 477
>Glyma01g41140.1
Length = 1324
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Query: 20 MDAKHGSIVQISFFEASNLQVLKDSSLIHSNANLGVRGQSFLNLSELGNLIEAQHLILSL 79
+D ++V S E NL VL+ +S+I SN NL + GQ L L+ G+ I+ Q L LSL
Sbjct: 326 IDGGESTVVTASVLEVRNLAVLRQNSVISSNTNLALYGQGLLQLTGDGDAIKGQRLSLSL 385
Query: 80 LTNSKVGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCNKNSSWILTLQIC 139
N VG +L+ PL+ + L + + ++L PP+ C+ N + +LQIC
Sbjct: 386 FYNVTVGPGSLLQAPLDDDASRGSVTKHL-CDTQRCPIDLITPPDDCHVNYTLSFSLQIC 444
Query: 140 RVEIAIVEVATTGS 153
RVE +V GS
Sbjct: 445 RVEDLLVNGIMKGS 458
>Glyma11g04290.1
Length = 1325
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Query: 20 MDAKHGSIVQISFFEASNLQVLKDSSLIHSNANLGVRGQSFLNLSELGNLIEAQHLILSL 79
+D ++V S E NL VL+ +S++ SN NL + GQ L L+ G+ I+ Q L LSL
Sbjct: 358 IDGGESTVVTASVLEVRNLAVLRQNSVVSSNTNLALYGQGLLQLTGDGDAIKGQRLSLSL 417
Query: 80 LTNSKVGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCNKNSSWILTLQIC 139
N VG +L+ PL+ + L + + ++L PP+ C+ N + +LQIC
Sbjct: 418 FYNVTVGPGSLLQAPLDDDASRGTVTKHL-CDTQRCPIDLITPPDDCHVNYTLSFSLQIC 476
Query: 140 RVEIAIVEVATTGS 153
RVE +V GS
Sbjct: 477 RVEDLLVNGIMKGS 490
>Glyma10g20860.1
Length = 369
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 85 VGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCNKNSSWILTLQICRVEIA 144
VG +L GPLE + D++ +LY + E EL HP E CN NSS TLQICRVE
Sbjct: 104 VGPGSILHGPLENATTDDV-TPKLYCDKEEFPYELLHPLEDCNVNSSLSFTLQICRVEDI 162
Query: 145 IVEVATTGSGLRFPWIRRLSVEVS 168
+VE GS + F R +SVE S
Sbjct: 163 LVEGLIKGSIVHFHRARTISVESS 186