Miyakogusa Predicted Gene

Lj5g3v0575450.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0575450.1 tr|F2CX82|F2CX82_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,41.33,5e-16,FAMILY NOT
NAMED,NULL,CUFF.53334.1
         (405 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma08g03550.2                                                       188   8e-48
Glyma08g03550.1                                                       188   9e-48
Glyma05g36070.2                                                       186   4e-47
Glyma05g36070.1                                                       185   6e-47
Glyma04g09230.1                                                       137   3e-32
Glyma06g09360.1                                                       135   6e-32
Glyma01g41140.1                                                        79   6e-15
Glyma11g04290.1                                                        79   6e-15
Glyma10g20860.1                                                        63   5e-10

>Glyma08g03550.2 
          Length = 1209

 Score =  188 bits (478), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 103/161 (63%), Positives = 111/161 (68%), Gaps = 2/161 (1%)

Query: 8   VIVHLWLNPKMFMDAKHGSIVQISFFEASNLQVLKDSSLIHSNANLGVRGQSFLNLSELG 67
           V +HL LN KM +DA    IV  S  EASNL VLKDSS+IHSNANLGV GQ FLNLS  G
Sbjct: 203 VKIHLMLNSKMLIDANGDRIVATSLLEASNLVVLKDSSVIHSNANLGVHGQGFLNLSGAG 262

Query: 68  NLIEAQHLILSLLTNSKVGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCN 127
           NLIEAQHLILSL  +  VG   VLRGPLE SG+D  M  QLY E+EN  VEL HPPE CN
Sbjct: 263 NLIEAQHLILSLFYSINVGPGSVLRGPLEASGDD--MTPQLYCEVENCPVELLHPPEDCN 320

Query: 128 KNSSWILTLQICRVEIAIVEVATTGSGLRFPWIRRLSVEVS 168
            NSS   TLQICRVE  IVE   TGS + F WIR + V  S
Sbjct: 321 VNSSLAFTLQICRVEDVIVEGTITGSVVHFHWIRNIDVSYS 361


>Glyma08g03550.1 
          Length = 1230

 Score =  188 bits (478), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 103/161 (63%), Positives = 111/161 (68%), Gaps = 2/161 (1%)

Query: 8   VIVHLWLNPKMFMDAKHGSIVQISFFEASNLQVLKDSSLIHSNANLGVRGQSFLNLSELG 67
           V +HL LN KM +DA    IV  S  EASNL VLKDSS+IHSNANLGV GQ FLNLS  G
Sbjct: 203 VKIHLMLNSKMLIDANGDRIVATSLLEASNLVVLKDSSVIHSNANLGVHGQGFLNLSGAG 262

Query: 68  NLIEAQHLILSLLTNSKVGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCN 127
           NLIEAQHLILSL  +  VG   VLRGPLE SG+D  M  QLY E+EN  VEL HPPE CN
Sbjct: 263 NLIEAQHLILSLFYSINVGPGSVLRGPLEASGDD--MTPQLYCEVENCPVELLHPPEDCN 320

Query: 128 KNSSWILTLQICRVEIAIVEVATTGSGLRFPWIRRLSVEVS 168
            NSS   TLQICRVE  IVE   TGS + F WIR + V  S
Sbjct: 321 VNSSLAFTLQICRVEDVIVEGTITGSVVHFHWIRNIDVSYS 361


>Glyma05g36070.2 
          Length = 1372

 Score =  186 bits (472), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 102/161 (63%), Positives = 110/161 (68%), Gaps = 2/161 (1%)

Query: 8   VIVHLWLNPKMFMDAKHGSIVQISFFEASNLQVLKDSSLIHSNANLGVRGQSFLNLSELG 67
           V +HL LN KM +DA    IV  S  EASNL VLKDSS+IHSNANLGV GQ  LNLS  G
Sbjct: 434 VKIHLMLNSKMLIDANGDQIVATSLLEASNLVVLKDSSVIHSNANLGVHGQGSLNLSGAG 493

Query: 68  NLIEAQHLILSLLTNSKVGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCN 127
           NLIEAQHLILSL  +  VG   VLRGPLE SG+D  M  QLY E+EN  VEL HPPE CN
Sbjct: 494 NLIEAQHLILSLFFSINVGPGSVLRGPLEASGDD--MTPQLYCEVENCPVELLHPPEDCN 551

Query: 128 KNSSWILTLQICRVEIAIVEVATTGSGLRFPWIRRLSVEVS 168
            NSS   TLQICRVE  IVE   TGS + F WIR + V  S
Sbjct: 552 VNSSLAFTLQICRVEDVIVEGTITGSVVHFHWIRNIDVSYS 592


>Glyma05g36070.1 
          Length = 1437

 Score =  185 bits (470), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 102/161 (63%), Positives = 110/161 (68%), Gaps = 2/161 (1%)

Query: 8   VIVHLWLNPKMFMDAKHGSIVQISFFEASNLQVLKDSSLIHSNANLGVRGQSFLNLSELG 67
           V +HL LN KM +DA    IV  S  EASNL VLKDSS+IHSNANLGV GQ  LNLS  G
Sbjct: 434 VKIHLMLNSKMLIDANGDQIVATSLLEASNLVVLKDSSVIHSNANLGVHGQGSLNLSGAG 493

Query: 68  NLIEAQHLILSLLTNSKVGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCN 127
           NLIEAQHLILSL  +  VG   VLRGPLE SG+D  M  QLY E+EN  VEL HPPE CN
Sbjct: 494 NLIEAQHLILSLFFSINVGPGSVLRGPLEASGDD--MTPQLYCEVENCPVELLHPPEDCN 551

Query: 128 KNSSWILTLQICRVEIAIVEVATTGSGLRFPWIRRLSVEVS 168
            NSS   TLQICRVE  IVE   TGS + F WIR + V  S
Sbjct: 552 VNSSLAFTLQICRVEDVIVEGTITGSVVHFHWIRNIDVSYS 592


>Glyma04g09230.1 
          Length = 1407

 Score =  137 bits (344), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/161 (50%), Positives = 99/161 (61%), Gaps = 1/161 (0%)

Query: 8   VIVHLWLNPKMFMDAKHGSIVQISFFEASNLQVLKDSSLIHSNANLGVRGQSFLNLSELG 67
           V + L  N KM +D      V  S  EASNL VL+ +S+IHSNANLGV GQ  LNLS  G
Sbjct: 407 VKMFLMWNSKMLIDGGEDITVATSLLEASNLIVLRGASVIHSNANLGVHGQGLLNLSGPG 466

Query: 68  NLIEAQHLILSLLTNSKVGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCN 127
           + IEAQ L+LSL  +  VG   VLRGPLE +  D+ +  +LY + E+   EL HPPE CN
Sbjct: 467 DWIEAQRLVLSLFYSIHVGPGSVLRGPLENATTDD-VTPKLYCDKEDCPYELLHPPEDCN 525

Query: 128 KNSSWILTLQICRVEIAIVEVATTGSGLRFPWIRRLSVEVS 168
            NSS   TLQICRVE  +VE    GS + F   R +SVE S
Sbjct: 526 VNSSLSFTLQICRVEDILVEGLIKGSVVHFHRARTISVESS 566


>Glyma06g09360.1 
          Length = 1271

 Score =  135 bits (341), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 82/161 (50%), Positives = 98/161 (60%), Gaps = 1/161 (0%)

Query: 8   VIVHLWLNPKMFMDAKHGSIVQISFFEASNLQVLKDSSLIHSNANLGVRGQSFLNLSELG 67
           V + L  N KM +D      V  S  EASNL VL+ +S+IHSNANLGV GQ  LNLS  G
Sbjct: 318 VKMFLMWNSKMLIDGGEDVTVATSLLEASNLIVLRGASVIHSNANLGVHGQGLLNLSGPG 377

Query: 68  NLIEAQHLILSLLTNSKVGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCN 127
           + IEAQ L+LSL  +  VG   VLRGPLE +  D+ +  +LY   E+   EL HPPE CN
Sbjct: 378 DWIEAQRLVLSLFYSIHVGPGSVLRGPLENATTDD-VTPKLYCNNEDCPYELLHPPEDCN 436

Query: 128 KNSSWILTLQICRVEIAIVEVATTGSGLRFPWIRRLSVEVS 168
            NSS   TLQICRVE  +VE    GS + F   R +SVE S
Sbjct: 437 VNSSLSFTLQICRVEDILVEGLIKGSVVHFHRARTISVESS 477


>Glyma01g41140.1 
          Length = 1324

 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 1/134 (0%)

Query: 20  MDAKHGSIVQISFFEASNLQVLKDSSLIHSNANLGVRGQSFLNLSELGNLIEAQHLILSL 79
           +D    ++V  S  E  NL VL+ +S+I SN NL + GQ  L L+  G+ I+ Q L LSL
Sbjct: 326 IDGGESTVVTASVLEVRNLAVLRQNSVISSNTNLALYGQGLLQLTGDGDAIKGQRLSLSL 385

Query: 80  LTNSKVGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCNKNSSWILTLQIC 139
             N  VG   +L+ PL+       +   L  + +   ++L  PP+ C+ N +   +LQIC
Sbjct: 386 FYNVTVGPGSLLQAPLDDDASRGSVTKHL-CDTQRCPIDLITPPDDCHVNYTLSFSLQIC 444

Query: 140 RVEIAIVEVATTGS 153
           RVE  +V     GS
Sbjct: 445 RVEDLLVNGIMKGS 458


>Glyma11g04290.1 
          Length = 1325

 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 1/134 (0%)

Query: 20  MDAKHGSIVQISFFEASNLQVLKDSSLIHSNANLGVRGQSFLNLSELGNLIEAQHLILSL 79
           +D    ++V  S  E  NL VL+ +S++ SN NL + GQ  L L+  G+ I+ Q L LSL
Sbjct: 358 IDGGESTVVTASVLEVRNLAVLRQNSVVSSNTNLALYGQGLLQLTGDGDAIKGQRLSLSL 417

Query: 80  LTNSKVGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCNKNSSWILTLQIC 139
             N  VG   +L+ PL+       +   L  + +   ++L  PP+ C+ N +   +LQIC
Sbjct: 418 FYNVTVGPGSLLQAPLDDDASRGTVTKHL-CDTQRCPIDLITPPDDCHVNYTLSFSLQIC 476

Query: 140 RVEIAIVEVATTGS 153
           RVE  +V     GS
Sbjct: 477 RVEDLLVNGIMKGS 490


>Glyma10g20860.1 
          Length = 369

 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 48/84 (57%), Gaps = 1/84 (1%)

Query: 85  VGSRPVLRGPLEVSGEDNMMVAQLYWEIENGMVELPHPPEKCNKNSSWILTLQICRVEIA 144
           VG   +L GPLE +  D++   +LY + E    EL HP E CN NSS   TLQICRVE  
Sbjct: 104 VGPGSILHGPLENATTDDV-TPKLYCDKEEFPYELLHPLEDCNVNSSLSFTLQICRVEDI 162

Query: 145 IVEVATTGSGLRFPWIRRLSVEVS 168
           +VE    GS + F   R +SVE S
Sbjct: 163 LVEGLIKGSIVHFHRARTISVESS 186