Miyakogusa Predicted Gene

Lj5g3v0554400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0554400.1 tr|B9H7G8|B9H7G8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_559256 PE=4
SV=1,63.64,7e-18,DUF1997,Protein of unknown function
DUF1997,CUFF.53391.1
         (118 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma11g18030.1                                                       170   3e-43
Glyma11g18030.2                                                       170   4e-43

>Glyma11g18030.1 
          Length = 244

 Score =  170 bits (431), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 89/125 (71%), Positives = 104/125 (83%), Gaps = 7/125 (5%)

Query: 1   MAKAILLSNKWYSHGQ----RS-STLQKFSHGK-KIDIKAVTSSDSNSKK-ANLFAAKKD 53
           MAKAILLSNKWY + Q    RS  T+QKFSHGK  + +KA TS +SN+KK ANLFA KK+
Sbjct: 1   MAKAILLSNKWYGYEQFWVTRSYPTIQKFSHGKMDLKVKAATSLNSNAKKKANLFAEKKE 60

Query: 54  RVKLPTYDDVLGGKRYPISEFLSQPSAIASVLNTKALQSFQSLGANTYRCELPKLRFFNF 113
           R++LPTY+D LGGK+Y ISEFLSQPS IA+VLNTKALQSF+SL ANTYRCELPKL+F NF
Sbjct: 61  RIRLPTYNDDLGGKKYHISEFLSQPSGIAAVLNTKALQSFESLDANTYRCELPKLQFLNF 120

Query: 114 EASPI 118
           EA P+
Sbjct: 121 EAVPL 125


>Glyma11g18030.2 
          Length = 171

 Score =  170 bits (430), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 89/125 (71%), Positives = 104/125 (83%), Gaps = 7/125 (5%)

Query: 1   MAKAILLSNKWYSHGQ----RS-STLQKFSHGK-KIDIKAVTSSDSNSKK-ANLFAAKKD 53
           MAKAILLSNKWY + Q    RS  T+QKFSHGK  + +KA TS +SN+KK ANLFA KK+
Sbjct: 1   MAKAILLSNKWYGYEQFWVTRSYPTIQKFSHGKMDLKVKAATSLNSNAKKKANLFAEKKE 60

Query: 54  RVKLPTYDDVLGGKRYPISEFLSQPSAIASVLNTKALQSFQSLGANTYRCELPKLRFFNF 113
           R++LPTY+D LGGK+Y ISEFLSQPS IA+VLNTKALQSF+SL ANTYRCELPKL+F NF
Sbjct: 61  RIRLPTYNDDLGGKKYHISEFLSQPSGIAAVLNTKALQSFESLDANTYRCELPKLQFLNF 120

Query: 114 EASPI 118
           EA P+
Sbjct: 121 EAVPL 125