Miyakogusa Predicted Gene

Lj5g3v0553270.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0553270.1 Non Chatacterized Hit- tr|I1M9P5|I1M9P5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.24090
PE,82.31,0,Endonuclease_5,Endonuclease V; seg,NULL,CUFF.53289.1
         (256 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g16820.1                                                       432   e-121
Glyma14g16820.2                                                       395   e-110
Glyma14g16820.3                                                       349   2e-96

>Glyma14g16820.1 
          Length = 268

 Score =  432 bits (1110), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 207/244 (84%), Positives = 219/244 (89%), Gaps = 5/244 (2%)

Query: 18  WITAQDTLREKLITEDSFPWK-----APSTGLRYVGGVDISFSKDDPSRACGTLVVLDFH 72
           WITAQ+ LREKLITED F WK          LRYVGGVDISFSKDDPSRACGTLVVLDFH
Sbjct: 25  WITAQNILREKLITEDCFAWKLQAGSKEEEALRYVGGVDISFSKDDPSRACGTLVVLDFH 84

Query: 73  TLQVVYEDFSLVTLEVPYVPGFLAFREAPVLLDILEKMKRSDNPFYPQLIMVDGNGILHP 132
           TLQV+Y+DFSLVTL+VPYVPGFLAFREAPVLL +LEKMKRS+NPFYPQL+MVDGNGILHP
Sbjct: 85  TLQVLYQDFSLVTLQVPYVPGFLAFREAPVLLQLLEKMKRSNNPFYPQLLMVDGNGILHP 144

Query: 133 RGFGLACHIGVMANLPTIGIGKNLHHVDGLDQSTVRKLLGAKENSSKDFITLVGCSGHIW 192
           RGFGLACHIGV ANLPTIGIGKNLHHVDGL  S VR+LLGA+EN S+DFI LVGCSGHIW
Sbjct: 145 RGFGLACHIGVEANLPTIGIGKNLHHVDGLTHSRVRELLGAEENCSEDFINLVGCSGHIW 204

Query: 193 GAAMRATQGSIKPIFISIGHRISLQTAITIVQMTCKYRVPELIRQADIRSRDYIRKFEMN 252
           G AMR+TQGSIKPIFISIGH+ISLQTAI IVQMTCKYRVPE IRQADIRSRDYIRK E N
Sbjct: 205 GVAMRSTQGSIKPIFISIGHKISLQTAIMIVQMTCKYRVPEPIRQADIRSRDYIRKLEAN 264

Query: 253 AKVK 256
           AKVK
Sbjct: 265 AKVK 268


>Glyma14g16820.2 
          Length = 250

 Score =  395 bits (1014), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 189/224 (84%), Positives = 202/224 (90%), Gaps = 5/224 (2%)

Query: 18  WITAQDTLREKLITEDSFPWKAPS-----TGLRYVGGVDISFSKDDPSRACGTLVVLDFH 72
           WITAQ+ LREKLITED F WK  +       LRYVGGVDISFSKDDPSRACGTLVVLDFH
Sbjct: 25  WITAQNILREKLITEDCFAWKLQAGSKEEEALRYVGGVDISFSKDDPSRACGTLVVLDFH 84

Query: 73  TLQVVYEDFSLVTLEVPYVPGFLAFREAPVLLDILEKMKRSDNPFYPQLIMVDGNGILHP 132
           TLQV+Y+DFSLVTL+VPYVPGFLAFREAPVLL +LEKMKRS+NPFYPQL+MVDGNGILHP
Sbjct: 85  TLQVLYQDFSLVTLQVPYVPGFLAFREAPVLLQLLEKMKRSNNPFYPQLLMVDGNGILHP 144

Query: 133 RGFGLACHIGVMANLPTIGIGKNLHHVDGLDQSTVRKLLGAKENSSKDFITLVGCSGHIW 192
           RGFGLACHIGV ANLPTIGIGKNLHHVDGL  S VR+LLGA+EN S+DFI LVGCSGHIW
Sbjct: 145 RGFGLACHIGVEANLPTIGIGKNLHHVDGLTHSRVRELLGAEENCSEDFINLVGCSGHIW 204

Query: 193 GAAMRATQGSIKPIFISIGHRISLQTAITIVQMTCKYRVPELIR 236
           G AMR+TQGSIKPIFISIGH+ISLQTAI IVQMTCKYRVPE IR
Sbjct: 205 GVAMRSTQGSIKPIFISIGHKISLQTAIMIVQMTCKYRVPEPIR 248


>Glyma14g16820.3 
          Length = 229

 Score =  349 bits (895), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 177/244 (72%), Positives = 187/244 (76%), Gaps = 44/244 (18%)

Query: 18  WITAQDTLREKLITEDSFPWKAPS-----TGLRYVGGVDISFSKDDPSRACGTLVVLDFH 72
           WITAQ+ LREKLITED F WK  +       LRYVGGVDISFSKDDPSRACGTLVVLDFH
Sbjct: 25  WITAQNILREKLITEDCFAWKLQAGSKEEEALRYVGGVDISFSKDDPSRACGTLVVLDFH 84

Query: 73  TLQVVYEDFSLVTLEVPYVPGFLAFREAPVLLDILEKMKRSDNPFYPQLIMVDGNGILHP 132
           TLQV+Y+DFSLVTL+VPYVPGFLAFREAPVLL +LEKMKRS+NPFYPQL+MVDGNGILHP
Sbjct: 85  TLQVLYQDFSLVTLQVPYVPGFLAFREAPVLLQLLEKMKRSNNPFYPQLLMVDGNGILHP 144

Query: 133 RGFGLACHIGVMANLPTIGIGKNLHHVDGLDQSTVRKLLGAKENSSKDFITLVGCSGHIW 192
           RGFGLACHIGV ANLPTIGIGKN                                     
Sbjct: 145 RGFGLACHIGVEANLPTIGIGKN------------------------------------- 167

Query: 193 GAAMRATQGSIKPIFISIGHRISLQTAITIVQMTCKYRVPELIRQADIRSRDYIRKFEMN 252
             AMR+TQGSIKPIFISIGH+ISLQTAI IVQMTCKYRVPE IRQADIRSRDYIRK E N
Sbjct: 168 --AMRSTQGSIKPIFISIGHKISLQTAIMIVQMTCKYRVPEPIRQADIRSRDYIRKLEAN 225

Query: 253 AKVK 256
           AKVK
Sbjct: 226 AKVK 229