Miyakogusa Predicted Gene

Lj5g3v0539630.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0539630.1 tr|B9HAJ6|B9HAJ6_POPTR Ein3-binding f-box protein
4 OS=Populus trichocarpa GN=EBF4 PE=4 SV=1,51.81,3e-17,SUBFAMILY NOT
NAMED,NULL; F-BOX/LEUCINE RICH REPEAT
PROTEIN,NULL,NODE_34412_length_216_cov_656.555542.path1.1
         (84 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma14g14410.1                                                       152   6e-38
Glyma17g31940.1                                                       145   9e-36
Glyma04g07110.1                                                       120   3e-28
Glyma06g07200.1                                                       118   1e-27
Glyma17g12270.1                                                        70   4e-13
Glyma13g23510.1                                                        68   2e-12
Glyma04g20330.1                                                        63   8e-11

>Glyma14g14410.1 
          Length = 644

 Score =  152 bits (385), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 67/84 (79%), Positives = 72/84 (85%)

Query: 1  MSKVLGFSGTDDFCPGGTIYTNPKEASFFLSHGLPVDVYFPARKRSRISAPFVFSREWLE 60
          MSKVLGFSG DDFCP G+IY NPKEASFFLS G  VDVYFP RKRSR++APFVF  EW E
Sbjct: 1  MSKVLGFSGVDDFCPMGSIYANPKEASFFLSLGPQVDVYFPPRKRSRVNAPFVFDGEWFE 60

Query: 61 QKQETSIETLPDECLFEIFRKLPG 84
          QKQ+TSIE LPDECLFEIFR+LP 
Sbjct: 61 QKQKTSIEALPDECLFEIFRRLPA 84


>Glyma17g31940.1 
          Length = 610

 Score =  145 bits (366), Expect = 9e-36,   Method: Composition-based stats.
 Identities = 63/83 (75%), Positives = 69/83 (83%)

Query: 1  MSKVLGFSGTDDFCPGGTIYTNPKEASFFLSHGLPVDVYFPARKRSRISAPFVFSREWLE 60
          MSKVLGFSG DDFCP G+IY NPKEASFFL  G  VDVYFP RKRSR++ PFVF  EW E
Sbjct: 1  MSKVLGFSGVDDFCPMGSIYANPKEASFFLPLGPQVDVYFPPRKRSRVNTPFVFDGEWFE 60

Query: 61 QKQETSIETLPDECLFEIFRKLP 83
          QK +TS+E LPDECLFEIFR+LP
Sbjct: 61 QKPKTSVEALPDECLFEIFRRLP 83


>Glyma04g07110.1 
          Length = 636

 Score =  120 bits (302), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 55/84 (65%), Positives = 60/84 (71%)

Query: 1  MSKVLGFSGTDDFCPGGTIYTNPKEASFFLSHGLPVDVYFPARKRSRISAPFVFSREWLE 60
          MSKV  F+G DDF  GG IY NPKE   FLS G  VDVY P +KRSR S PF  S EW E
Sbjct: 1  MSKVFSFTGNDDFYHGGPIYPNPKEPCLFLSLGRQVDVYLPLQKRSRFSVPFDISGEWFE 60

Query: 61 QKQETSIETLPDECLFEIFRKLPG 84
          QK +TSIE+LPDECLFEI R+LP 
Sbjct: 61 QKPKTSIESLPDECLFEILRRLPA 84


>Glyma06g07200.1 
          Length = 638

 Score =  118 bits (296), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 56/86 (65%), Positives = 61/86 (70%), Gaps = 2/86 (2%)

Query: 1  MSKVLGFSGTDDFCPGGTIYTNPKEASFFLSHGLPVDVYFPARKRSRISAPFVFSREWLE 60
          MSKV  F+G DDF  GG IY NPKE   FLS G  VDVY P +KRSR S PF  S EW E
Sbjct: 1  MSKVFSFTGNDDFYHGGPIYPNPKEPCLFLSLGRQVDVYLPLQKRSRFSVPFDISGEWFE 60

Query: 61 QKQ--ETSIETLPDECLFEIFRKLPG 84
          QKQ  +TSIE+LPDECLFEI R+LP 
Sbjct: 61 QKQKPKTSIESLPDECLFEILRRLPA 86


>Glyma17g12270.1 
          Length = 639

 Score = 70.5 bits (171), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/84 (45%), Positives = 49/84 (58%), Gaps = 4/84 (4%)

Query: 1  MSKVLGFSGTDDFCPGGTIYTNPKE-ASFFLSHGLPVDVYFPARKRSRISAPFVFSREWL 59
          M  ++ +SG D+  PGG+   NP E    + + G  +DVY+P  KR R S      RE  
Sbjct: 1  MPALVNYSGDDELYPGGSFCPNPVELGRLYTTIGSNLDVYYPPTKRPR-SIFEAIERE-- 57

Query: 60 EQKQETSIETLPDECLFEIFRKLP 83
          +  QE  IE LPDECLFEIFR+LP
Sbjct: 58 QYYQEPGIEVLPDECLFEIFRRLP 81


>Glyma13g23510.1 
          Length = 639

 Score = 68.2 bits (165), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 4/84 (4%)

Query: 1  MSKVLGFSGTDDFCPGGTIYTNPKE-ASFFLSHGLPVDVYFPARKRSRISAPFVFSREWL 59
          M  ++ +SG D+  PGG+   NP E    + + G  +D+Y+P  KR R S      RE  
Sbjct: 1  MPALVNYSGDDELYPGGSFCPNPMELGRLYTTIGSNLDMYYPPTKRPR-SIFEAIERE-- 57

Query: 60 EQKQETSIETLPDECLFEIFRKLP 83
          +  Q+  IE LPDECLFEIFR+LP
Sbjct: 58 QYYQDPGIEVLPDECLFEIFRRLP 81


>Glyma04g20330.1 
          Length = 650

 Score = 62.8 bits (151), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)

Query: 1  MSKVLGFSGTDDFCPGGTIYTNPKEASFFLSHGLPVD-VYFPARKRSRISAPFVFSREWL 59
          M  ++ +SG D+   GG+   NP +     ++G  VD  Y+   KR+RI+A   F     
Sbjct: 1  MPTLVNYSGDDELYHGGSFCQNPIDLGRLCTYGSIVDEYYYTPSKRARINALDAFEFLGR 60

Query: 60 EQKQETSIETLPDECLFEIFRKL 82
          EQ Q+ +I+ LPDECLFE+FR L
Sbjct: 61 EQDQKPTIDVLPDECLFEVFRWL 83