Miyakogusa Predicted Gene
- Lj5g3v0529460.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj5g3v0529460.2 Non Chatacterized Hit- tr|C6TH49|C6TH49_SOYBN
Putative uncharacterized protein OS=Glycine max PE=4 S,63.51,4e-18,no
description,NULL; FAMILY NOT NAMED,NULL; Ubiquitin-like,NULL;
seg,NULL,CUFF.53232.2
(269 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma17g32040.1 288 3e-78
Glyma14g14350.1 275 3e-74
Glyma04g07020.1 148 8e-36
Glyma06g07110.5 89 4e-18
Glyma11g10970.3 73 4e-13
Glyma11g10970.2 73 4e-13
Glyma11g10920.1 73 4e-13
Glyma11g10970.1 71 1e-12
Glyma12g03170.1 52 5e-07
>Glyma17g32040.1
Length = 275
Score = 288 bits (738), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 146/246 (59%), Positives = 170/246 (69%), Gaps = 7/246 (2%)
Query: 26 ISIIDTIFAKKSFLYGKLPSQPFRLSVLKLDGSSFDIQVSKTASIAELKDAVEAVFSHMP 85
++IID IFA+KSF Y +LPSQP RL+VLKLDGS F IQVSKTA++AELKDAVEAVFSH+P
Sbjct: 30 LAIIDGIFARKSFFYDRLPSQPLRLTVLKLDGSCFHIQVSKTATVAELKDAVEAVFSHVP 89
Query: 86 EKGPAKISWPHVWGQFCLCYDGQKLVTEEDYLRNYGIKDGDELHFMRHVSNNCTXXXXXX 145
KGPAKISW HVWGQFCLCYDGQKLVTE+D LRNYGIKDGD+L F+RHV+NNC
Sbjct: 90 HKGPAKISWAHVWGQFCLCYDGQKLVTEKDNLRNYGIKDGDQLRFIRHVTNNCC--VQRK 147
Query: 146 XXXXXXXXXXXXXXXSQVNSCEPEENCNDGEVSSDGEEDQENVKTKHCIGXXXXXXH--- 202
SQV+ +P+ NC+D E+ SD +E +N K KH I
Sbjct: 148 RLKKRVVYLKQHRRSSQVDGYQPKGNCDDDEIGSD-DEATDNGKIKHHIEEEEEEEREEE 206
Query: 203 -VGKNKLTGIVGELFSCTPLXXXXXXXXXXXXXXXTIPRCLLGSFRKIRRIVCFGRRRHY 261
VGKNKL G +GELFS TPL T+P+C+LGSFRKIR IVCFGR+RHY
Sbjct: 207 CVGKNKLAGFLGELFSYTPLAVVRRTRTKSKIWPTTMPKCILGSFRKIRSIVCFGRKRHY 266
Query: 262 SMRLTW 267
S RL W
Sbjct: 267 SRRLPW 272
>Glyma14g14350.1
Length = 276
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 140/242 (57%), Positives = 162/242 (66%), Gaps = 8/242 (3%)
Query: 31 TIFAKKSFLYGKLPSQPFRLSVLKLDGSSFDIQVSKTASIAELKDAVEAVFSHMPEKGPA 90
IFA+KSF Y +LPSQP RL+VLKLDGS F IQVSK A++AELKDAVEAVFSH+P KGPA
Sbjct: 35 AIFARKSFFYDRLPSQPLRLTVLKLDGSCFHIQVSKMATVAELKDAVEAVFSHVPHKGPA 94
Query: 91 KISWPHVWGQFCLCYDGQKLVTEEDYLRNYGIKDGDELHFMRHVSNNCTXXXXXXXXXXX 150
KISW HVWGQFCLCYDGQKLVTE+DYLRNYGIKDGD+L F+RHV+NNC
Sbjct: 95 KISWAHVWGQFCLCYDGQKLVTEKDYLRNYGIKDGDQLRFIRHVTNNCCVQRKRLKKRVV 154
Query: 151 XXXXXXXXXXSQVNSCEPEENCNDGEVSSDGEEDQENVKTKHCIGXXXXXXH-----VGK 205
QV+ P+ NC+D ++ SD +E ++ K KH I VGK
Sbjct: 155 YLKQHRRSL--QVDGHLPKGNCDDNDIGSD-DEATDSGKIKHHIEEEEEEEEREEECVGK 211
Query: 206 NKLTGIVGELFSCTPLXXXXXXXXXXXXXXXTIPRCLLGSFRKIRRIVCFGRRRHYSMRL 265
NKL G +G+LFS TPL T+P+CLLGS RKIR IVCFGRRRHYS RL
Sbjct: 212 NKLAGFLGDLFSYTPLAVVRRTRTKSRIWPTTMPKCLLGSLRKIRSIVCFGRRRHYSRRL 271
Query: 266 TW 267
W
Sbjct: 272 PW 273
>Glyma04g07020.1
Length = 236
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 126/223 (56%), Gaps = 20/223 (8%)
Query: 1 MAETSLILTTTTEKIKSRKLLQFSTISIIDTIFAKKSFLYGKLPSQPFRLSVLKLDGSSF 60
M E L++ + +I R L ++ +DT SF + S+ LS+LKLD SSF
Sbjct: 1 MGERRLMIVS--HEIPQRSL----SMHYVDT-----SFFNDRFHSETLILSILKLDASSF 49
Query: 61 DIQVSKTASIAELKDAVEAVFSHMPEKGPAKISWPHVWGQFCLCYDGQKLVTEEDYLRNY 120
++V+ A++AELK AVEAVF +P+KGP KI WP VW QFCL Y GQKLV+E DY+R++
Sbjct: 50 HVEVANAATVAELKQAVEAVFCRVPQKGPGKILWPLVWRQFCLSYQGQKLVSESDYIRDF 109
Query: 121 GIKDGDELHFMRHVSNNCTXXXXXXXXXXXXXXXXXXXXXSQVNSCEPEENCNDGEVSSD 180
GI+DGD+LHF+ HVS+ C+ S+VN + +E+ +D ++
Sbjct: 110 GIEDGDQLHFVHHVSDTCS-FEGKQSKKQAVNLKQHRRSSSKVNRYQQKEHNDDNDI--- 165
Query: 181 GEED--QENVKTKHCIGXXXXXXHVGKNKLTGIVGELFSCTPL 221
G D EN K ++C + GK L G +G LFS + L
Sbjct: 166 GLHDIVIENAKIRNC---NNAEENGGKLSLPGFLGGLFSHSRL 205
>Glyma06g07110.5
Length = 447
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 83/182 (45%), Gaps = 36/182 (19%)
Query: 37 SFLYGKLPSQPFRLSVLKLDGSSFDIQVSKTASIAELKDAVEAVFSHMPEKGPAKISWPH 96
SF Y +LPSQ LS+LKLD SSF ++V+ A++AELK AVEAVFSH+P+KGP KI W
Sbjct: 14 SFSYDRLPSQTLILSILKLDASSFHVEVANAATVAELKQAVEAVFSHVPQKGPGKILW-- 71
Query: 97 VWGQFCLCYDGQKLVTEEDYLRNYGIKDGDELHFMRHVSNNCT-XXXXXXXXXXXXXXXX 155
LHF+ HVS+ C+
Sbjct: 72 ------------------------------LLHFVYHVSDTCSFERKQSKKRVVNLKQHM 101
Query: 156 XXXXXSQVNSCEPEENCNDGEVSSDGEEDQENVKTKHCIGXXXXXXHVGKNKLTGIVGEL 215
S+VN + +E+ ND + + EN + +HC GK L GI+ L
Sbjct: 102 RRRSSSKVNRYQQKEH-NDDKDIDLDDIVIENARIQHCNNAEENGG--GKRSLAGILAGL 158
Query: 216 FS 217
FS
Sbjct: 159 FS 160
>Glyma11g10970.3
Length = 163
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 47 PFRLSVLKLDGSSFDIQVSKTASIAELKDAVEAVFSHMPEK--GPAKISWPHVWGQFCLC 104
R+SVLKLDG++ D+ V +A++ +LK A++ + M + G ISW HVW +CL
Sbjct: 50 AMRISVLKLDGTTLDVIVMNSATVKDLKLAIKKKVNDMEQSSMGHRHISWKHVWANYCLS 109
Query: 105 YDGQKLVTEEDYLRNYGIKDGDELHFMRHV 134
KL+ + + L+N+G+++ ++ F+ +V
Sbjct: 110 CHNNKLLDDNEALQNFGVRNNSQVQFVSYV 139
>Glyma11g10970.2
Length = 163
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 47 PFRLSVLKLDGSSFDIQVSKTASIAELKDAVEAVFSHMPEK--GPAKISWPHVWGQFCLC 104
R+SVLKLDG++ D+ V +A++ +LK A++ + M + G ISW HVW +CL
Sbjct: 50 AMRISVLKLDGTTLDVIVMNSATVKDLKLAIKKKVNDMEQSSMGHRHISWKHVWANYCLS 109
Query: 105 YDGQKLVTEEDYLRNYGIKDGDELHFMRHV 134
KL+ + + L+N+G+++ ++ F+ +V
Sbjct: 110 CHNNKLLDDNEALQNFGVRNNSQVQFVSYV 139
>Glyma11g10920.1
Length = 163
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 47 PFRLSVLKLDGSSFDIQVSKTASIAELKDAVEAVFSHMPEK--GPAKISWPHVWGQFCLC 104
R+SVLKLDG++ D+ V +A++ +LK A++ + M + G ISW HVW +CL
Sbjct: 50 AMRISVLKLDGTTLDVIVMNSATVKDLKLAIKKKVNDMEQSSMGHRHISWKHVWANYCLS 109
Query: 105 YDGQKLVTEEDYLRNYGIKDGDELHFMRHV 134
KL+ + + L+N+G+++ ++ F+ +V
Sbjct: 110 CHNNKLLDDNEALQNFGVRNNSQVQFVSYV 139
>Glyma11g10970.1
Length = 217
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 33 FAKKSFLYGKLPSQPFRLSVLKLDGSSFDIQVSKTASIAELKDAVEAVFSHMPEK--GPA 90
FA L R+SVLKLDG++ D+ V +A++ +LK A++ + M + G
Sbjct: 90 FADVDTLINLELGSAMRISVLKLDGTTLDVIVMNSATVKDLKLAIKKKVNDMEQSSMGHR 149
Query: 91 KISWPHVWGQFCLCYDGQKLVTEEDYLRNYGIKDGDELHFMRHV 134
ISW HVW +CL KL+ + + L+N+G+++ ++ F+ +V
Sbjct: 150 HISWKHVWANYCLSCHNNKLLDDNEALQNFGVRNNSQVQFVSYV 193
>Glyma12g03170.1
Length = 152
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 47 PFRLSVLKLDGSSFDIQVSKTASIAELKDAVEAVFSHMPEKGPAKISWPHVWGQFCLCYD 106
R+SVLKLDG++F ++++ + +++ + G ISW H+ +CL
Sbjct: 50 AMRISVLKLDGTTFGLKLAIKKKVNDMEQS---------SMGHRHISWKHICENYCLSCH 100
Query: 107 GQKLVTEEDYLRNYGIKDGDELHFMRHV 134
KL+ + D L+++G+++ ++ F+ +V
Sbjct: 101 NNKLLDDNDALQHFGVRNNSQVQFVSYV 128