Miyakogusa Predicted Gene

Lj5g3v0526500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0526500.1 tr|G7JD84|G7JD84_MEDTR Mitochondrial acidic
protein MAM33 OS=Medicago truncatula GN=MTR_4g006560
PE=,40.57,3e-19,Mitochondrial glycoprotein MAM33-like,Mitochondrial
glycoprotein; COMPLEMENT COMPONENT 1-RELATED,NUL,gene.g59058.t1.1
         (120 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g33120.3                                                       182   7e-47
Glyma17g33120.1                                                       182   7e-47
Glyma14g13400.1                                                       174   2e-44
Glyma17g33120.2                                                       116   4e-27
Glyma08g23200.1                                                        99   1e-21
Glyma07g02890.1                                                        94   4e-20
Glyma18g40750.1                                                        60   7e-10
Glyma07g16490.1                                                        59   1e-09
Glyma14g07130.1                                                        56   8e-09
Glyma02g41840.1                                                        53   7e-08
Glyma02g46150.1                                                        52   2e-07
Glyma14g02610.1                                                        52   2e-07

>Glyma17g33120.3 
          Length = 234

 Score =  182 bits (462), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 83/117 (70%), Positives = 97/117 (82%)

Query: 1   MFDWYEHITGPGYDSSGADVRLHFSLLVDISKGEDGSELEFVCSAWPKCLNVEKVFILRR 60
           MFDW EH+   G DSSG ++RLH SL+VDI+KG+  SELEFVCSAWP CLNVEKV++LRR
Sbjct: 109 MFDWCEHVPACGDDSSGVNMRLHLSLIVDIAKGDGDSELEFVCSAWPDCLNVEKVYMLRR 168

Query: 61  GHMPARPFLGPNFRDLNPKVQEKFREYLDTRGVNDALAAFLHDYMLYKDRIEHLRWM 117
           G M ARP++GP+FRDL  KVQEKF EYLD RGVN+ LA FLH+YM+ KDRIE LRWM
Sbjct: 169 GRMAARPYVGPDFRDLKAKVQEKFYEYLDVRGVNNELAVFLHEYMMNKDRIELLRWM 225


>Glyma17g33120.1 
          Length = 234

 Score =  182 bits (462), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 83/117 (70%), Positives = 97/117 (82%)

Query: 1   MFDWYEHITGPGYDSSGADVRLHFSLLVDISKGEDGSELEFVCSAWPKCLNVEKVFILRR 60
           MFDW EH+   G DSSG ++RLH SL+VDI+KG+  SELEFVCSAWP CLNVEKV++LRR
Sbjct: 109 MFDWCEHVPACGDDSSGVNMRLHLSLIVDIAKGDGDSELEFVCSAWPDCLNVEKVYMLRR 168

Query: 61  GHMPARPFLGPNFRDLNPKVQEKFREYLDTRGVNDALAAFLHDYMLYKDRIEHLRWM 117
           G M ARP++GP+FRDL  KVQEKF EYLD RGVN+ LA FLH+YM+ KDRIE LRWM
Sbjct: 169 GRMAARPYVGPDFRDLKAKVQEKFYEYLDVRGVNNELAVFLHEYMMNKDRIELLRWM 225


>Glyma14g13400.1 
          Length = 237

 Score =  174 bits (442), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 82/118 (69%), Positives = 96/118 (81%), Gaps = 1/118 (0%)

Query: 1   MFDWYEHITGPGYDSSGADVRLHFSLLVDISKGEDG-SELEFVCSAWPKCLNVEKVFILR 59
           MFD  EH+   G DSSG ++RLH SL+VDI+KGE+G SELEFVCSAWP CLNVEKV++LR
Sbjct: 111 MFDGCEHVPACGDDSSGVNLRLHLSLIVDIAKGEEGDSELEFVCSAWPDCLNVEKVYMLR 170

Query: 60  RGHMPARPFLGPNFRDLNPKVQEKFREYLDTRGVNDALAAFLHDYMLYKDRIEHLRWM 117
           R  M ARP++GP+FRDL  KVQE F EYLD RGVN+ LA FLH+YM+ KDRIE LRWM
Sbjct: 171 RSRMAARPYVGPDFRDLKAKVQETFYEYLDVRGVNNELAIFLHEYMMNKDRIELLRWM 228


>Glyma17g33120.2 
          Length = 187

 Score =  116 bits (291), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 51/74 (68%), Positives = 62/74 (83%)

Query: 1   MFDWYEHITGPGYDSSGADVRLHFSLLVDISKGEDGSELEFVCSAWPKCLNVEKVFILRR 60
           MFDW EH+   G DSSG ++RLH SL+VDI+KG+  SELEFVCSAWP CLNVEKV++LRR
Sbjct: 109 MFDWCEHVPACGDDSSGVNMRLHLSLIVDIAKGDGDSELEFVCSAWPDCLNVEKVYMLRR 168

Query: 61  GHMPARPFLGPNFR 74
           G M ARP++GP+FR
Sbjct: 169 GRMAARPYVGPDFR 182


>Glyma08g23200.1 
          Length = 229

 Score = 98.6 bits (244), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 42/99 (42%), Positives = 70/99 (70%), Gaps = 1/99 (1%)

Query: 19  DVRLHFSLLVDISKGEDGSELEFVCSAWPKCLNVEKVFILRRGHMPARPFLGPNFRDLNP 78
           ++++H +++V+ISKGE G  LE +CSAWP  + ++++FI     + A P+ GP F +L+ 
Sbjct: 122 EMQMHITVIVNISKGE-GRVLEIMCSAWPDSIEIKRLFIRANEKIIAEPYAGPEFTELDD 180

Query: 79  KVQEKFREYLDTRGVNDALAAFLHDYMLYKDRIEHLRWM 117
           ++Q+K  ++L+ RG+ND LA FLH YM  KD++E + WM
Sbjct: 181 ELQDKLYDFLEVRGINDELAGFLHQYMKNKDKVELIGWM 219


>Glyma07g02890.1 
          Length = 188

 Score = 93.6 bits (231), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 41/99 (41%), Positives = 67/99 (67%), Gaps = 1/99 (1%)

Query: 19  DVRLHFSLLVDISKGEDGSELEFVCSAWPKCLNVEKVFILRRGHMPARPFLGPNFRDLNP 78
           ++++H +++V ISKGE G  LE +CSAWP  + ++++FI     + A P+ GP F +L+ 
Sbjct: 81  EMQMHITVIVTISKGE-GCVLEIMCSAWPDSIEIKRLFIRANEKIIAEPYAGPEFMELDD 139

Query: 79  KVQEKFREYLDTRGVNDALAAFLHDYMLYKDRIEHLRWM 117
           ++Q +  ++L+ RG+ND LA FLH YM  KD+ E + WM
Sbjct: 140 ELQYRLYDFLEVRGINDELACFLHQYMKNKDKAELIGWM 178


>Glyma18g40750.1 
          Length = 254

 Score = 59.7 bits (143), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 2/113 (1%)

Query: 6   EHITGPGYDSSGADVRLHFSLLVDISKGEDGSELEFVCSAWPKCLNVEKVFILRRGHMPA 65
           EH      ++   D      L+V + K E+G  LEF  +A+P  ++++ + I +      
Sbjct: 134 EHEDDENGNNEKNDSESSIPLVVSVFK-ENGVSLEFGVTAFPDEISIDSLSIKQSEESED 192

Query: 66  R-PFLGPNFRDLNPKVQEKFREYLDTRGVNDALAAFLHDYMLYKDRIEHLRWM 117
           +  + GP F DL+  +Q+ F +YL+ RG+  +   FL +YM  KD  E+L W+
Sbjct: 193 QLAYEGPEFIDLDENLQKAFHKYLEIRGIKPSTTNFLQEYMFAKDNKEYLMWL 245


>Glyma07g16490.1 
          Length = 253

 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 2/105 (1%)

Query: 14  DSSGADVRLHFSLLVDISKGEDGSELEFVCSAWPKCLNVEKVFILRRGHMPAR-PFLGPN 72
           D+   D      L+V + K E+G  LEF  +A+P  ++++ + I +      +  + GP 
Sbjct: 141 DNEKNDSESSIPLVVSVFK-ENGVSLEFGVTAFPDEISIDSLSIKQCEESEDQLAYEGPE 199

Query: 73  FRDLNPKVQEKFREYLDTRGVNDALAAFLHDYMLYKDRIEHLRWM 117
           F DL+  +Q+ F +YL+ RG+  +   FL +YM  KD  E+L W+
Sbjct: 200 FIDLDENLQKAFHKYLEIRGIKPSTTNFLQEYMFAKDNKEYLMWL 244


>Glyma14g07130.1 
          Length = 253

 Score = 56.2 bits (134), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 48/85 (56%), Gaps = 1/85 (1%)

Query: 34  EDGSELEFVCSAWPKCLNVEKVFILRRGHMPAR-PFLGPNFRDLNPKVQEKFREYLDTRG 92
           +DG  LEF C  +P  + ++ + +        +  + GP F+ L+  +Q+ F +YL+ RG
Sbjct: 160 KDGPYLEFNCVGYPDEIVIDGLSVKNPDLTEDQVAYEGPGFQTLDENLQKSFHKYLEIRG 219

Query: 93  VNDALAAFLHDYMLYKDRIEHLRWM 117
           +  +   FLH+YM+ KD  E+L W+
Sbjct: 220 IKPSTTNFLHEYMINKDSKEYLVWL 244


>Glyma02g41840.1 
          Length = 253

 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)

Query: 36  GSELEFVCSAWPKCLNVEKVFILRRGHMPAR-PFLGPNFRDLNPKVQEKFREYLDTRGVN 94
           G  LEF C  +P  + ++ + +        +  + GP+F+ L+  +Q+ F  YL+ RG+ 
Sbjct: 162 GPYLEFNCVGYPDEIVIDGLSVKNPDLTEDQVAYEGPDFQGLDENLQKSFHRYLEIRGIK 221

Query: 95  DALAAFLHDYMLYKDRIEHLRWM 117
            +   FLH+YM+ KD  E+L W+
Sbjct: 222 PSTINFLHEYMINKDSKEYLVWL 244


>Glyma02g46150.1 
          Length = 215

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 7/95 (7%)

Query: 28  VDISKGEDGSELEFVCSAWPKCLNVEKVFILRRGH------MPARPFLGPNFRDLNPKVQ 81
           VD+SK +    L F+C  +   L +  V +  +        +P++ + GP F +L+ K++
Sbjct: 105 VDVSKPQQNESLIFLCGLYEDALGIHSVSMRPKVQDSGYLLIPSQ-YTGPVFAELDEKMR 163

Query: 82  EKFREYLDTRGVNDALAAFLHDYMLYKDRIEHLRW 116
           + F  Y++ RGVN++L  FL  ++  K+    +RW
Sbjct: 164 DAFHSYIEERGVNESLFKFLQAWLYVKEHRNLMRW 198


>Glyma14g02610.1 
          Length = 215

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 7/95 (7%)

Query: 28  VDISKGEDGSELEFVCSAWPKCLNVEKVFILRRGH------MPARPFLGPNFRDLNPKVQ 81
           VD+SK +    L F+C  +   L +  V +  +        +P++ + GP F +L+ K++
Sbjct: 105 VDVSKPQQNESLIFLCGLYEDALGIHSVSMRPKVQDSGYLLIPSQ-YTGPVFAELDEKMR 163

Query: 82  EKFREYLDTRGVNDALAAFLHDYMLYKDRIEHLRW 116
           + F  Y++ RGVN++L  FL  ++  K+    +RW
Sbjct: 164 DAFHSYIEERGVNESLFKFLQAWLYVKEHRNLMRW 198