Miyakogusa Predicted Gene

Lj5g3v0469120.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0469120.1 tr|H0K816|H0K816_9PSEU NADH dehydrogenase
OS=Saccharomonospora azurea SZMC 14600 GN=SZMC14600_16246
,34.25,0.7,seg,NULL,CUFF.53107.1
         (319 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g33480.1                                                       591   e-169
Glyma14g12700.1                                                       440   e-124

>Glyma17g33480.1 
          Length = 318

 Score =  591 bits (1524), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 282/318 (88%), Positives = 293/318 (92%)

Query: 1   MATSAAIGGALTAHDRWILTAVNXXXXXXXXXXXXFIVLCYLLFKELRKFSFKLVFYLAL 60
           MATS A+ GALTAHDR ILTAVN            FIV+CYLLFKELRKFSFKLVFYLAL
Sbjct: 1   MATSVAVAGALTAHDRRILTAVNVGASSLSLAGSSFIVVCYLLFKELRKFSFKLVFYLAL 60

Query: 61  SDMLCSFFNVIGDPSQGFFCYAQGYSTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLE 120
           SDMLCSFF +IGDPS+GFFCYAQGYSTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLE
Sbjct: 61  SDMLCSFFGIIGDPSKGFFCYAQGYSTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLE 120

Query: 121 AMFHLYVWGTSLVMTVMRSFGNDHKHFGAWCWTQTGRTGKAIHFITFYMPLWGAILYNGF 180
           AMFHLYVWGTSLVMTVMRSFGNDHKHFGAWCWTQTGRTGKA+HF+TFYMPLWGAILYNGF
Sbjct: 121 AMFHLYVWGTSLVMTVMRSFGNDHKHFGAWCWTQTGRTGKAVHFVTFYMPLWGAILYNGF 180

Query: 181 TYLQVIRMLNNATRMAVGMSGQAYVSDTRDNMRALNRWGYYPLILIGSWAFGTINRIHDF 240
           TYLQVIRMLNNATRMAVGMSGQ +VSDTRDNMRALNRWGYYPLILIGSW FGTINRIHDF
Sbjct: 181 TYLQVIRMLNNATRMAVGMSGQTFVSDTRDNMRALNRWGYYPLILIGSWTFGTINRIHDF 240

Query: 241 FDPSHKIFWLSLLDVGTAALMGLFNSIAYGLNSSVRRAICERLDKCWPERLYRWLPNKFK 300
           F+P+HKIFWL+ LDVGTAALMGLFNSIAYGLNSSVRRAICERLDK WPERL RWLPN  K
Sbjct: 241 FEPNHKIFWLTFLDVGTAALMGLFNSIAYGLNSSVRRAICERLDKFWPERLNRWLPNSLK 300

Query: 301 YKNLQQESELVSFQTEGQ 318
           YKNLQQESELV F+TE Q
Sbjct: 301 YKNLQQESELVLFKTEDQ 318


>Glyma14g12700.1 
          Length = 293

 Score =  440 bits (1132), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 221/292 (75%), Positives = 235/292 (80%), Gaps = 36/292 (12%)

Query: 1   MATSAAIGGALTAHDRWILTAVNXXXXXXXXXXXXFIVLCYLLFKELRKFSFKLVFYLAL 60
           MATS A+ GALTAHDR +LTAVN            FIV+CYLLFKELRKFSFKLVFYLAL
Sbjct: 1   MATSVAVAGALTAHDRRVLTAVNAGASSLSLAGSSFIVVCYLLFKELRKFSFKLVFYLAL 60

Query: 61  SDMLCSFFNVIGDPSQGFFCYAQGYSTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLE 120
           SD+LCS F++IGDPS+GFFCYAQGYSTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLE
Sbjct: 61  SDILCSLFSIIGDPSKGFFCYAQGYSTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLE 120

Query: 121 AMFHLYVWGTSLVMTVMRSFGNDHKHFGAWCWTQTGRTG---KAIHFITFYMPLWGAILY 177
           AMFHLYVWGTSLVMTVMRSFGNDHKHFGAWCWTQTGRTG   KA+HF+TFYMPLWGAILY
Sbjct: 121 AMFHLYVWGTSLVMTVMRSFGNDHKHFGAWCWTQTGRTGKARKAVHFVTFYMPLWGAILY 180

Query: 178 NGFTYLQVIRMLNNATRMAVGMSGQAYVSDTRDNMR------------------------ 213
           NGFTY QVIRMLNNATR+      Q +VSDTRDNMR                        
Sbjct: 181 NGFTYFQVIRMLNNATRVC-----QTFVSDTRDNMRVIYSIVSKLQDWKYKDPYTWIRKH 235

Query: 214 ----ALNRWGYYPLILIGSWAFGTINRIHDFFDPSHKIFWLSLLDVGTAALM 261
               ALNRWGYYPLILIGSWAFGTIN IHDFF+P+HKIFWL+ LDVGTAALM
Sbjct: 236 PLSCALNRWGYYPLILIGSWAFGTINHIHDFFEPNHKIFWLTFLDVGTAALM 287