Miyakogusa Predicted Gene

Lj5g3v0467070.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj5g3v0467070.1 Non Chatacterized Hit- tr|I1JTY5|I1JTY5_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,55.74,0.00000009,seg,NULL,CUFF.53021.1
         (164 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g33450.1                                                        77   9e-15
Glyma04g05590.1                                                        55   4e-08
Glyma06g05610.1                                                        51   6e-07

>Glyma17g33450.1 
          Length = 263

 Score = 76.6 bits (187), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 39/61 (63%), Positives = 46/61 (75%), Gaps = 2/61 (3%)

Query: 1  MDHTKNQGFIRKS-WFPWITKVGFIVLIALLAKSVKSQDNVEEPSSGLLCISECATCPQI 59
          M H  N+GF +KS WFPWITKVGF+VL A  A  V S++ +E+P SG LCISECATCP I
Sbjct: 17 MGHIMNKGFTQKSYWFPWITKVGFMVL-ASCACMVTSEEKIEDPLSGSLCISECATCPTI 75

Query: 60 C 60
          C
Sbjct: 76 C 76


>Glyma04g05590.1 
          Length = 166

 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 5/60 (8%)

Query: 1  MDHTKNQGFIRKSWFPWITKVGFIVLIALLAKSVKSQDNVEEPSSGLLCISECATCPQIC 60
          M+HTK   FI K  F WI K  F+ L AL A    S++ VE+PSSGL CIS+CA CP IC
Sbjct: 1  MNHTK---FI-KILFSWILKACFMGL-ALFATVTSSEEKVEDPSSGLFCISDCAKCPVIC 55


>Glyma06g05610.1 
          Length = 167

 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 4  TKNQGFIRKSWFPWITKVGFIVLIALLAKSVKSQDNVEEPSSGLLCISECATCPQI 59
          ++N     KS F WI K  F+ L+ L A    S+   E+PSSGL CIS+CATCP I
Sbjct: 30 SQNSLLFIKSLFLWILKAWFMGLV-LFATVTSSEYKAEDPSSGLFCISDCATCPVI 84